Asti027064.1
Basic Information
- Insect
- Aphodius sticticus
- Gene Symbol
- lrrfip2_1
- Assembly
- GCA_963966075.1
- Location
- OZ014509.1:72667456-72689407[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5e-109 4.2e-105 352.8 31.7 1 300 152 448 152 448 0.94 2 2 0.29 4.8e+03 -2.0 4.8 123 167 449 493 447 515 0.61
Sequence Information
- Coding Sequence
- ATGGAAAGAAGCGACAGTACCGATTCTCTTGAAGACATCCTCAATGGACTTGAATCAGGAAGCGACGAAGAGAACTTCAACGTTGAACAGACACGAAAGACGCCCAACGAGCCATCCAAAGACGTTTTGGACACCGGTCAACCGAAAATCCAAGAAAATTCTCCCATTGATACTCCCATTGAACTCCAAGCATCAATAGAAAGTATTCAAGAAGCCAAGGAGGCACACGATGCTCttccagtagttttagagtGTCATAATCCTAACCTAAGCGTGCCAGAGGAAGCTAAAAGTGGTGAAAAAGTGTCAAAAACTTTAGAAGGTGTAACCGAGACGGAGTCTAGTGATTTTGAGACTGTTATCAAAGGTGCAAAAACAAGTAGGAGTCAGAGTATTTGTTCCCATGGCGACGATGATGTCATCAATCAATTCTTGGATAAGACCACGGAGAATGCAGAGGCGCGCATGCTGGCGAAGCGGCAGGCTCGAGCAGAGGCTAGAGAGATCCGCATGCGAGAGCTGGAGAGGCAGCAGAAAGAGCAGGAGGAAAATGCTGATAGGCAGTTCGATATGCTTGCAGAACCGGTGGTCAGAACGCCTATAAGGACGACGACGTCCAGGTACCTTTCCAGCAGGAGAAGTTCGGAGGATTCATTGGAGGATGGCGGAAGTTTACGAGAAATACGGCACGAACTCAAAGAGGTTGAGGAGAAATTCAGGAAGGCCATGGTTGCAAACGCCCAGCTTGACAATGACAAAGCCTCGCAGACATATCAACTAGAACTCCTCAAAGACAGATTAGAGGAGTTAGAAGAGGAACATTCGCAGTTGCGGAGAGAACATAGGGATAAATGTAGGGAACACGATCAGTTGAAAAGGCAGGCCGATAGACTTAAAGATGACCTGGCTGTGACGCAGTCTGAGTTAGAAGAACGGGATAGACTCATAGCCGAGAAGGGGCTAATCATAGTCGGGGAGGATCCCCCTCCCGGGGATCAGTCCAGCTCCTCGGAGATTGTCGTCAATGGGCTCGGGACACCTAAGAAAGCTCTCGTCAAGGTGGAGAATGCTCAATTGCTAGAGGCTGCCGGAGAAGGAAGTTTAGatGTCCGGCTGGCACGTTTTGCAAAAGAGAAGAGCGAACTCCAAGACCAGATTAGTCACCTAAAGTTAGAGCTAGAGGAGGAGCGCAGCAAAAGACGGAAGTCGAACGCTGCAGGCATAACTTTGAACGGCCCAACGTCCGATTCAGACTATGATGCCGCTGATGTCCAGAgagAAATTAGTAAACAATTAGCCGAGTACAAGTTCCGGGCACAAAAAGCCGAACAAGATGCGGCGACGCTGCAAGCGAACGTTGCTAGGTTAGAAAGTCAGGTGATACGGTATAAAGCTGCCTCGGAGGTATCAGAAAAATCCGAGGAGGCCTTGAAAGCCGAGAAGAGGAAATTACAGAGAGAGGCTCGGGAAGCTATGAATAGAGCGGAAGAATTAGAAACGTCAAATACGCACTTACTGAAGAGATTGGACAAACTGAAGAACGCAAAGTCGGCGTTGCTCAAAGAGCTCTGA
- Protein Sequence
- MERSDSTDSLEDILNGLESGSDEENFNVEQTRKTPNEPSKDVLDTGQPKIQENSPIDTPIELQASIESIQEAKEAHDALPVVLECHNPNLSVPEEAKSGEKVSKTLEGVTETESSDFETVIKGAKTSRSQSICSHGDDDVINQFLDKTTENAEARMLAKRQARAEAREIRMRELERQQKEQEENADRQFDMLAEPVVRTPIRTTTSRYLSSRRSSEDSLEDGGSLREIRHELKEVEEKFRKAMVANAQLDNDKASQTYQLELLKDRLEELEEEHSQLRREHRDKCREHDQLKRQADRLKDDLAVTQSELEERDRLIAEKGLIIVGEDPPPGDQSSSSEIVVNGLGTPKKALVKVENAQLLEAAGEGSLDVRLARFAKEKSELQDQISHLKLELEEERSKRRKSNAAGITLNGPTSDSDYDAADVQREISKQLAEYKFRAQKAEQDAATLQANVARLESQVIRYKAASEVSEKSEEALKAEKRKLQREAREAMNRAEELETSNTHLLKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00981007;
- 90% Identity
- iTF_00981007;
- 80% Identity
- -