Most023382.1
Basic Information
- Insect
- Melikaiella ostensackeni
- Gene Symbol
- lrrfip2
- Assembly
- GCA_032362435.1
- Location
- JAUMHM010000078.1:2464874-2468775[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.4e-115 2.2e-110 371.0 30.5 1 300 29 327 29 327 0.96 2 3 0.0036 3.2e+02 2.7 3.2 122 171 327 376 325 379 0.91 3 3 0.042 3.7e+03 -0.8 5.8 134 233 360 396 346 402 0.51
Sequence Information
- Coding Sequence
- ATGGAGTCATCTGTAGCAGGACGGAGGCGAACTGCCACAAGGCATTCTGCCGAAGATCAAGCTCTGGACCAAATTGCCAAAGAGGCAGAAGCAAGATTAGCAGCTAGGCGACAAGCTCGAGCTGAGGCGAGAGAAATTCGAATGCGTGAATTGGAAAGGCAGCAGAAAGAAGCTGAGGAAAACGCAGACAGGGTGTATGATATGTGCACAGTAGATAGCAGTCGCACGATGAGGGTAACGCCAGATCCTATTAGAACTTCCCGTCTACTTGCAAATTCAAATAGCTTTCAGTCTAGTCGGAGGTCATCTGAAGATTCTTTGGAGGATGCTGGTCTTGGTAGAGATCCAAGAATAGaacttaaagaatttgaagaaaagttcaGAAAAGCTATGATTGCTAATGCACAGTTAGACAACGAAAAGTCGTCTTACGCTTATCAAGTGGATTTATTAAAAGATAAACTAGAAGAGTTGGAAGAAACGGCTGCTCAATTGCGGCGAGAACTGAGGGAAAAAAATCGAGAGGCAGAGCAACTGAAACGTATCAGTCAAAGATTGAAAGAAGACTTAGATATATGCAGAGCTCAATTAATAGAAAGGGATACTTTAATACAGGAAAATGGTTTGGTAATAGTAGAAGACGAAGGAAGTGATGGTGAAGAAACAGAAGGAGAAAATGGTCTTCGTCCCAGAAGAAGAGTGCTGGTTAGTACAGAGGCAGCAGAAGTATTACAAAACGCGGGAGAAGGCTCTTtagATGTACGGCTGAGAAAGTTTGCATCGGAGAAAAAGGAATTACATGATGAAATTCGTCATTTAAGACTAGAATTAGAAGAGGCCAGAAATCGCATGAGGCCCGAAAGATCTACGGGTTTGGTATTAGGTGGATTGTCCGACTCTGAAGATGTTCAACGAGAAGCTAATAAATTGATCGCcgattataaatttaaacttcaaaaggCAGAGCAAGACATGTCAACATTGCAAGCAACAGTTGCCAGGCTAGAGAGTCAAGTGATTCGTTATAAATCAGCTGCAGAAGCATCTGAAAAAGCAGAAGACgaattaaaagtagaaaagagAAAACTACAAAGAGAATTCAGAGAATCCCAAAGTCGTGTGGAAGAATTGGAAACTGCAAACACCCATTTGCAACGTAGATTAGATAAGCTAAAGAATGCAAGATCCACTCTTTTGAAGGAGATATGA
- Protein Sequence
- MESSVAGRRRTATRHSAEDQALDQIAKEAEARLAARRQARAEAREIRMRELERQQKEAEENADRVYDMCTVDSSRTMRVTPDPIRTSRLLANSNSFQSSRRSSEDSLEDAGLGRDPRIELKEFEEKFRKAMIANAQLDNEKSSYAYQVDLLKDKLEELEETAAQLRRELREKNREAEQLKRISQRLKEDLDICRAQLIERDTLIQENGLVIVEDEGSDGEETEGENGLRPRRRVLVSTEAAEVLQNAGEGSLDVRLRKFASEKKELHDEIRHLRLELEEARNRMRPERSTGLVLGGLSDSEDVQREANKLIADYKFKLQKAEQDMSTLQATVARLESQVIRYKSAAEASEKAEDELKVEKRKLQREFRESQSRVEELETANTHLQRRLDKLKNARSTLLKEI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00305050;
- 90% Identity
- iTF_00460519;
- 80% Identity
- -