Most010448.1
Basic Information
- Insect
- Melikaiella ostensackeni
- Gene Symbol
- -
- Assembly
- GCA_032362435.1
- Location
- JAUMHM010000016.1:45450995-45467118[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1e-11 1e-08 36.9 0.0 1 39 188 227 188 231 0.90 2 4 1.2e-11 1.2e-08 36.7 0.1 2 39 243 280 242 283 0.94 3 4 4.3e-18 4.4e-15 57.4 0.0 2 45 298 342 297 342 0.97 4 4 4.9e-18 5e-15 57.2 0.1 1 42 349 391 349 392 0.97
Sequence Information
- Coding Sequence
- ATGTTCCCGCAGAATCATAGGGACTGTTGGCAGACTGAAGATGAGGAGTGTGCGGAGGCAACAGCAGCAGCAATAGTCCTGGAATCCTGCCAACGCGACAATAACAACGGTAACGGTACTGCAAACAACAACAACGgtGATATGTTTTGTCACACAGGGCTTGGCCACTATGGACACCATCCGGACCCTGGAGAAGTGGATCTGCCTCCGGAGACACAGCCTACACCACCTAGTGCTACTCTCGTCGGCACCACCATCACGCATCTCAGAGACTCGGATCATCAATCGACAGaaattcagAATTGCGACAGCGTGAAGATAAAGTTCGAGACCTTACACACAATGGACTCCTCGGATACAATAGACATCGACAGTCACATGTCGGACAGAGCAAGTGTGAGTTCCAAAACGGCAGGCGACAACGACAACATGATGATGATAACACCTGAACTTCTTGGTTTGATGCCATCCGGAAATTCCATCCATTCGGATTCTGGTGAGAATAACTCCAGGGGTCATTCTGTCCAGTCAGGGTCGCATCACCACGGCTCGAAATCATGGACTCAGGAAGACATGGACGCAGCTTTGGACGCCTTGAGAAATCACGACATGAGTCTCACGAAAGCATCtgCAACATTTGGAATACCCTCCACGACACTGTGGCAAAGAGCTCATCGTTTAGGAATCGACACGCCGAAGAAAGACGGTCCAACAAAATCTTGGTCTGATGAGAGTCTCAATAATGCCCTTGAAGCATTGAGGACCGGAACAATATCTGCAAATAAGGCATCCAAGGCCTTTGGCATCCCTTCCAGTACTCTGTACAAAATTGCTAGGAGAGAAGGAATCAGACTTGCAGCTCCGTTTAATGCAAGCCCTACAACTTGGTCGCCAGCTGATCTCGACAGGGCTTTGGAGGCAATTAGATCTGGCCAAACGTCGGTCCAGAGAGCGTCGACAGAGTTTGGAATACCAACTGGAACGCTGTATGGAAGGTGCAAAAGGGAAGGAATTGAACTCAGTAGGAGTAATCCTACTCCGTGGAGCGAGGACGCTATGACGGAAGCTCTTGAGGCTGTTAGgtTGGGGCACATGAGTATAAACCAAGCTGCTATTCACTACAACTTACCGTACTCATCGCTATACGGGCGTTTTAAAAGAGGAAAATACGAAGAGCCAGTAGTCAACGAAATGTCGCAGGATGGTAGCAGTCCTCATTATCTCCATCAAAGTCCGAGTCAAAATCACTCCTCTTCCCTTCCCGATCAAATGCCCTATCAGGGCAGCTGA
- Protein Sequence
- MFPQNHRDCWQTEDEECAEATAAAIVLESCQRDNNNGNGTANNNNGDMFCHTGLGHYGHHPDPGEVDLPPETQPTPPSATLVGTTITHLRDSDHQSTEIQNCDSVKIKFETLHTMDSSDTIDIDSHMSDRASVSSKTAGDNDNMMMITPELLGLMPSGNSIHSDSGENNSRGHSVQSGSHHHGSKSWTQEDMDAALDALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEEPVVNEMSQDGSSPHYLHQSPSQNHSSSLPDQMPYQGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00294380;
- 90% Identity
- iTF_00676600;
- 80% Identity
- -