Basic Information

Insect: Melanostoma scalare
Gene Symbol: Sall1
Assembly: GCA_949752695.1
Location: OX456986.1:181754198-181764692[+]

Transcription Factor Domain

TF Family: zf-GAGA
Domain: zf-GAGA domain
PFAM: PF09237
TF Group: Zinc-Coordinating Group
Description: Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00055 5.5 9.1 0.2 16 52 270 305 265 306 0.89

2 16 0.047 4.6e+02 2.9 0.1 18 48 511 542 504 547 0.84

3 16 0.28 2.8e+03 0.4 0.3 24 46 547 569 544 572 0.85

4 16 0.15 1.5e+03 1.3 0.2 21 48 731 758 722 763 0.81

5 16 0.014 1.4e+02 4.6 0.0 23 48 762 786 758 790 0.87

6 16 0.0022 22 7.2 0.3 21 48 922 949 914 955 0.90

7 16 0.0063 62 5.7 0.0 19 48 1106 1134 1099 1139 0.84

8 16 0.13 1.3e+03 1.5 0.0 19 45 1259 1285 1252 1289 0.85

9 16 0.023 2.3e+02 3.9 0.0 22 48 1290 1316 1285 1321 0.86

10 16 1.6 1.6e+04 -2.0 0.0 23 32 1404 1413 1386 1420 0.69

11 16 0.00071 7 8.7 0.1 12 48 1487 1522 1485 1524 0.89

12 16 0.47 4.7e+03 -0.3 0.1 22 48 1656 1685 1651 1690 0.73

13 16 0.76 7.6e+03 -1.0 0.0 21 44 1715 1738 1712 1744 0.79

14 16 0.11 1.1e+03 1.7 0.0 23 45 1746 1768 1740 1771 0.85

15 16 0.21 2.1e+03 0.8 0.2 5 32 1782 1812 1778 1826 0.71

16 16 0.0047 47 6.1 0.0 21 46 1829 1854 1820 1861 0.81

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00055	5.5	9.1	0.2	16	52	270	305	265	306	0.89
2	16	0.047	4.6e+02	2.9	0.1	18	48	511	542	504	547	0.84
3	16	0.28	2.8e+03	0.4	0.3	24	46	547	569	544	572	0.85
4	16	0.15	1.5e+03	1.3	0.2	21	48	731	758	722	763	0.81
5	16	0.014	1.4e+02	4.6	0.0	23	48	762	786	758	790	0.87
6	16	0.0022	22	7.2	0.3	21	48	922	949	914	955	0.90
7	16	0.0063	62	5.7	0.0	19	48	1106	1134	1099	1139	0.84
8	16	0.13	1.3e+03	1.5	0.0	19	45	1259	1285	1252	1289	0.85
9	16	0.023	2.3e+02	3.9	0.0	22	48	1290	1316	1285	1321	0.86
10	16	1.6	1.6e+04	-2.0	0.0	23	32	1404	1413	1386	1420	0.69
11	16	0.00071	7	8.7	0.1	12	48	1487	1522	1485	1524	0.89
12	16	0.47	4.7e+03	-0.3	0.1	22	48	1656	1685	1651	1690	0.73
13	16	0.76	7.6e+03	-1.0	0.0	21	44	1715	1738	1712	1744	0.79
14	16	0.11	1.1e+03	1.7	0.0	23	45	1746	1768	1740	1771	0.85
15	16	0.21	2.1e+03	0.8	0.2	5	32	1782	1812	1778	1826	0.71
16	16	0.0047	47	6.1	0.0	21	46	1829	1854	1820	1861	0.81

Sequence Information

Coding Sequence: ATGCCTCTGGGGTTCTCCAAAGCATGCCGAACATGTTTAACATTGGACGGGACGCTTATTTCCATCTACGATTCAGATGGCTACGATGGCCAAGGACGTATTAAAGACATGATTGAAGAGATCACAACAATTACTCCCATGAAAACTGATGGTCTACCTGAGCTGGTTTGCCAGACCTGCTTCAATGAAATCAATAGATGCTTTACTTTTAAGGTGAAATGCATTAATTCGGATAGTACGCTTAGGAAACTCTTTGCAGCCGATGAAGAAACAGGTCACCAACAGGTGCAAACCGAggagttttataaaaatcaacGTGTGCCCATCATCGATAGCTTGATTTTACTTAAACGTGCGGTTGAGCAACCAGCAGTTGCTATTAAAACCGAAGAAATTCCTGCCCACGAttcattctcttactttgttaTTACTCCCTTGGATGAAGATAGTGAAACTGAAATACGTGAAGTCCCATTCGAGGGAAGAATAGACAACGttaaaattgaagaagaaaGCGGGGATGATTGCGATGAAGATAATACTTCACATACTAAACTTTTTACTGGTGTCAAAAAAGATGAAATGTCTTCCTTAGACGACTCTCGAAGTATGCACAACGATTCACCTGAACCAATAtgtgtcaaaataaaaactgaGCCAATCGATGAATCCATCCAATTTGAGGCAGCAGTCGACGGAATGAAAGTAAACTCGACAGAAAATCAAATTAGTCCTTCAAGGCGCTCCTATCAATGTCCTAAGTGCGAAAAAGTATTCAAGTACATATCACGTCTCAATGAACACCTACGAAGTCACAGCTCTGAAAGACCATTCGACTGCCATATTTGTGGCAAAAACTTCAAACAAATCAACCATGTCATGACTCACATCAAGTTAAGCCACAAAAAGAAACCCTTTAAGTGCGCAAAGTGCATTCGATGCTTTGCCAGTAGGTCACTTCTCAAAAAGCATcttaaaacacacatttcaaagGATAAAGCTTTTCCTACAAAGCAAAGTTTAATACCAGAGAAAACTCTGAATGATAAACAATATCTTGAAGAAGAACAACTCTTTGATAATGAACCAGTCTCCGATGATGAACTGCCATCGGATGATGGAAAACCTTTTGATGATGGAGAATCTTTTAACGAAGAACAACTATTAAATATGGAACAGGAATCACTTTTCCCGCAAACAGACAACAACACTGTGGATCCTTCTGACGAACAACAAACTACTAGCGATGGAATGAAAAAACAACAGGAAATTGAAACTCAACATGAGAACATTCCAAAACCAAATGATCAACAAGAAGATGATCATACAACTGTTGGTATGTCCTCGTCGCGACGTTCAAATCGGGCAAAAAAAGAAGTAATATATTCTTGTGATGCTGAGGAGACCCCTCCGTCCCACTCACAGACCAAAAATGAAACCGATAAAAAGGATGATGATCTTACAAACAATTTTGAGTGCCCTATATGCAAAAGAGacttcttttttgtttcgcGTCTTACTGCACACATGCGTTCGCACAGCGAGGAAAGGCCTTTTCCGTGTTCCATGTGTAATAAGTCTTTCAAACTGGATGGGAATCTTCAGAGTCATATCATGATATGTCACAAGAAGTTGAGGCCCTACAATTGTAGTGAATGCTCAAGGACTTTTTCTTGTACTTCAAATCttagaaagcatttgaaaataCACAATAAAACGTTAACTCGTAGAAAGCCTAAGCGTCGTACTCTCAAAAAGAAGAACCAAAAAAAGCAACCAACAAACGACATAAATTTCGAGCAGAATGTAGAACAAACCGAAGGCATAAACGAGATGGAAGAAGTCCCTGAGGGACAAGAGAATTCCCAAGAAAATGTATCACAAGAGCTAGATGTTGCAAAAGACAATGTTTTACTGACAGTTAAATGTCAGTTGTGTTCTGCATCAGTTTCCCCAGATAATTTGACAGAGCATATGCAAGATACGCATAACTTACCCGAATCAACCAGTGTTgttttaaaatcacaaaaaattaagaatccAGATCATTCCAATCAATCTGAGCTTGAAATTCAAGCTGCTGACCATTCACAATCTCTAAATGAGTTGAAAAGTAACTACAAGTGTACTATTTGCGATAAACtattTCCTTTCAATTCACGTCTCAAAGAACATATGCGAACTCATAGCAATGATAGGCCGTTTGAATGTTCCTTGTGTGACaaaagttttaaacaaaaatgccaCTTAAAGAGTCACATTTTAATTAATCACAAGAAACTAAAGCCGTTCAAATGTACTATGTGCTTCCGGACCTTTTCCAGTTCTTCAAATCTAAAACAGCACATGAAAACACATTTTGGAAATGGTAGACGCAAGCATAGGAAGCATCCGCAATACACTGTGGAGGAAAGCCCCGATAGTCAAAAACGACTATCTGATCTAAACGCAGAACTAAAAAATTTGTCAATGGCTCAGGAGGAAAGTCAGCCCAAACAGAATCTTGAAGTTGATGTCGAGGACGAAACTGAAGTGGAAGCCGCCGCCgtagttgaagttgaagtggaAGTTATCGAAGACGAAATCGATATGAACGACAAAATGGCATACGAGTCACCAGTTAAGACACCTTTATCATCTCCAAATTCAACAAACCAATCAAATATGCTTACTTCAGACACGAGTCATCCAATCCAGTGTCTTCAGTGCAATAAAGTGTTTTCCTATGTATCGCTTCTCAGTAAGCATCTCAAAACGCACAGCGATGAGAGGCCATACGCATGCTTAAGTTGTGaaaaaactttcaaacaaaGCTCTCACTTAAAGTCGCATATAATGATTCGACATAAGAAATTGAAGCCATTTAAGTGTCAAGAGTGTTTTAGACTTTTCTCTTGTAATTCGAATTTAACGAAGCATATGAAAACACACAACGGTAAGGGTAGTTGCAGAAAACCCAAAATGAAGCGCTTGATTCACAGAAGGAACATCACCCCAATAAGCGAATTTGCTCCGATAGAGTTAGATATTGAGAGCGAAACTGGACACGAACTTGAAGTTGAAGGAAATATTGATTTTAAcgaaatcaaaaacaaagtttCAGTATCCGTCAGAGATACTGAGTCTTCTTCTGTAAAATCCCTCCAAGAACAGCCAAATTCAAGTAAATTAGAGAAGCAAAAGAATTCTACAAAATCAGATGAGGTTCAAATATTAAAACCACTTGCCAGCACAACATCACCACCTTTCCAGTGCTATCAATGCAACAAAGaATTTACATTCATCTCCCGGCTAAATGAACACATGCGGACCCACAGCGATGAGAGGCCGTTCATTTGTtcaatatgtggcaagaccttCAAACAAAATGGTCACCTCAAGACTCACATTATGATTAGCCATGATAAATTCAAGCCCTACAAATGTGAAGATTGTCCACGAGAGTTCTCAAGTAACTTTAACCTCCAAGTACATTTGAAAACGCACTGCGCAAAGGGCAATCGAAGGAGAGCCAGGAGAAATAATGATTATCTGGAAGAGCCTCATAACATAACTTCCGAAGAAGGAACAACTGAAAGTGACAACATTTCACAACAGAACATTTACGGAAATCTAAGCTTTTGGGATGATAGCAACCAAGTGTCAGGAAGTTCATTATACTTAACACCACGCCACTCTCAACAAAATCAGAGCACACCGCAATCGAAAAAAGTTGCTCTTAAGTCTGTACATGCAAATATTGATTCCATACCAAAAGAGGTAGACAACTCATTAGCTAACACAACAAATCCGCTTCAGTGCCACCTGTGCAACAAAGTTTTTACATATTCCTCGGCTCTCGGTAAACATTTAAGAACACATAGCGATGACAGACCTTATGTTTGTTCATTATGTGGAAAGACTTTTAAGCAAAGTGGACATCTTAAATCTCACGTCATGATAAGTCATGATAAAatcaaaccctacaaatgtgAGAAATGTTTCCGAGATTTTTCCAGTAATTATAATCGTAAGGTGCATAAATGTAAATTTTCAACTACCGGCAAAAGTCACCGACGAAGTGGATCAAAGTCAAATGCTCAAGATATCACATCAAACGAAGACATTGAGGAACTACTTCATCCTGCCAACAATGGAGAAGAGAATACAGTTGAGAAGACtaaaaacaatccaaaaaaTACGGTCGATGGATCAagtaaaatacaacaaaaaagaaatagatgTTCGATTTGCTACATTCCTGTTGAGCTTGAGCATTTAACCGAACACATTCAACAATTTCATAATTCACTCGGCTCAACAAGTACTACAATAATAAAACAAGAGCCTCTGGATGAGCCTGAACATGAAGGTCATCCATTATTCGACACATTGTCAAACCAGATAGAGACTGGCGATGGGTCGCAATCACTCCATTGTACTGAATGCAACAAGGAATTTACGTATGTTTCGCGACTCACCGAACACATGCGATCTCATAGCGACGAAAGGCCATTCATCTGTACAATTTGTAACAAAAGTTTTAAGCAGAAAGGCCATCTCAAGAGCCACATTATgataaatcataaaaaaatcttACCTTATAAGTGTAATGAATGTCTACGGTCATTTCCGAGCAGATATAATTTGAAGATCCATCTAAAAACACACCGCAGCAAACGGCGTGCTGCTATAAAAAAGAGCTACTACAAGGATCCTCCTTACCATGGCAAGACATTGTCAAACACAAGCCCAGAACATGACCAGTTATTAACAAAAGAGAACACCCATGAACATACCGATGTATTTTTGGCTCAAGACATAATCAACAAAACTATTGAAAACCAATTTGCATTAGAAAGAGAAAAAGTAGAGACTGCACGCATGGAATTACCTCAATCATCAGGTGTTCAAGTAAAGAAGGAACCTTCAGATGCGCTACAACAAACAGAAAACTTTCTCCATGGTACAATTCCAAATGACACAGAACAACCACAAAGTTCACTGCTTTGCTTGGTATGTGGAAAGACTTTCGAACGTCAAGGTCAGCTTCGGCATCATATAATGATGAAACACGGCAAACGAATAAAACCTTTTAAATGTAAAGAATGCCCTCAATTGCTATCACTTTCGCATCTTAAGGAGCATATGAAGATCCATACTAGCGACCAGCCATTCATCTGCTCTCTGTGTGGCAAAGGTTTTAACAATGATACTGAGCTTTCTGCTCACCTTATTACGAGTCATAACAGATCTGAGCCATTTAAATGCGACATATGTGCAAAAACCTACAAATCTAGCACAGGACTCAAAAATCATCTTGTGATTCACAGTGATTATCGCCAACAAATGCGCAAAGCTATTCGCGCGGAACGAAAACAAAAGACCCACACAGAAGCTCATGAGTCAGTGAGTTATTCAGAGCAAGGGCTGCCGCAGTGTAAGATTTGTAAAAAAGAGTTTACAAATAACTGGGTTCTGAAGGACCACATGAAATCTCACACAAATGAAAAACCATTTGTATGCCCAATTTGCGAAAAGGGTTTCAATAAGAAATACAATCTCAAAATTCACGTTATGGctcacaagaaaataaaaccattCAAGTGTGATTATTGTAATCAATCGTTTTGCACGAATGCTGGCCGGAGAATACATCACCGATCTCACATGCGCAATAACGACCAGACAATAGCAGTAGATGCAATAAATAACTCTTAA
Protein Sequence: MPLGFSKACRTCLTLDGTLISIYDSDGYDGQGRIKDMIEEITTITPMKTDGLPELVCQTCFNEINRCFTFKVKCINSDSTLRKLFAADEETGHQQVQTEEFYKNQRVPIIDSLILLKRAVEQPAVAIKTEEIPAHDSFSYFVITPLDEDSETEIREVPFEGRIDNVKIEEESGDDCDEDNTSHTKLFTGVKKDEMSSLDDSRSMHNDSPEPICVKIKTEPIDESIQFEAAVDGMKVNSTENQISPSRRSYQCPKCEKVFKYISRLNEHLRSHSSERPFDCHICGKNFKQINHVMTHIKLSHKKKPFKCAKCIRCFASRSLLKKHLKTHISKDKAFPTKQSLIPEKTLNDKQYLEEEQLFDNEPVSDDELPSDDGKPFDDGESFNEEQLLNMEQESLFPQTDNNTVDPSDEQQTTSDGMKKQQEIETQHENIPKPNDQQEDDHTTVGMSSSRRSNRAKKEVIYSCDAEETPPSHSQTKNETDKKDDDLTNNFECPICKRDFFFVSRLTAHMRSHSEERPFPCSMCNKSFKLDGNLQSHIMICHKKLRPYNCSECSRTFSCTSNLRKHLKIHNKTLTRRKPKRRTLKKKNQKKQPTNDINFEQNVEQTEGINEMEEVPEGQENSQENVSQELDVAKDNVLLTVKCQLCSASVSPDNLTEHMQDTHNLPESTSVVLKSQKIKNPDHSNQSELEIQAADHSQSLNELKSNYKCTICDKLFPFNSRLKEHMRTHSNDRPFECSLCDKSFKQKCHLKSHILINHKKLKPFKCTMCFRTFSSSSNLKQHMKTHFGNGRRKHRKHPQYTVEESPDSQKRLSDLNAELKNLSMAQEESQPKQNLEVDVEDETEVEAAAVVEVEVEVIEDEIDMNDKMAYESPVKTPLSSPNSTNQSNMLTSDTSHPIQCLQCNKVFSYVSLLSKHLKTHSDERPYACLSCEKTFKQSSHLKSHIMIRHKKLKPFKCQECFRLFSCNSNLTKHMKTHNGKGSCRKPKMKRLIHRRNITPISEFAPIELDIESETGHELEVEGNIDFNEIKNKVSVSVRDTESSSVKSLQEQPNSSKLEKQKNSTKSDEVQILKPLASTTSPPFQCYQCNKEFTFISRLNEHMRTHSDERPFICSICGKTFKQNGHLKTHIMISHDKFKPYKCEDCPREFSSNFNLQVHLKTHCAKGNRRRARRNNDYLEEPHNITSEEGTTESDNISQQNIYGNLSFWDDSNQVSGSSLYLTPRHSQQNQSTPQSKKVALKSVHANIDSIPKEVDNSLANTTNPLQCHLCNKVFTYSSALGKHLRTHSDDRPYVCSLCGKTFKQSGHLKSHVMISHDKIKPYKCEKCFRDFSSNYNRKVHKCKFSTTGKSHRRSGSKSNAQDITSNEDIEELLHPANNGEENTVEKTKNNPKNTVDGSSKIQQKRNRCSICYIPVELEHLTEHIQQFHNSLGSTSTTIIKQEPLDEPEHEGHPLFDTLSNQIETGDGSQSLHCTECNKEFTYVSRLTEHMRSHSDERPFICTICNKSFKQKGHLKSHIMINHKKILPYKCNECLRSFPSRYNLKIHLKTHRSKRRAAIKKSYYKDPPYHGKTLSNTSPEHDQLLTKENTHEHTDVFLAQDIINKTIENQFALEREKVETARMELPQSSGVQVKKEPSDALQQTENFLHGTIPNDTEQPQSSLLCLVCGKTFERQGQLRHHIMMKHGKRIKPFKCKECPQLLSLSHLKEHMKIHTSDQPFICSLCGKGFNNDTELSAHLITSHNRSEPFKCDICAKTYKSSTGLKNHLVIHSDYRQQMRKAIRAERKQKTHTEAHESVSYSEQGLPQCKICKKEFTNNWVLKDHMKSHTNEKPFVCPICEKGFNKKYNLKIHVMAHKKIKPFKCDYCNQSFCTNAGRRIHHRSHMRNNDQTIAVDAINNS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00976726;
90% Identity: iTF_00976726;
80% Identity: iTF_00976726;