Msca061090.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Melanostoma scalare
Gene Symbol
Sall1
Assembly
GCA_949752695.1
Location
OX456986.1:181754198-181764692[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 29 9.4e-06 0.0024 20.1 1.1 1 23 250 272 250 272 0.99
2 29 0.00061 0.16 14.4 3.3 1 23 278 301 278 301 0.95
3 29 0.00061 0.16 14.4 4.5 1 23 306 328 306 328 0.99
4 29 0.00014 0.037 16.4 0.8 1 23 491 513 491 513 0.98
5 29 0.00011 0.03 16.7 1.3 1 23 519 542 519 542 0.97
6 29 0.0014 0.35 13.3 4.7 1 23 548 570 548 570 0.98
7 29 0.18 45 6.6 0.1 2 23 642 663 641 663 0.93
8 29 4.9e-06 0.0013 21.0 1.7 1 23 707 729 707 729 0.99
9 29 2.3e-05 0.0059 18.8 5.3 1 23 735 758 735 758 0.97
10 29 3.7e-07 9.5e-05 24.5 4.5 1 23 764 786 764 786 0.99
11 29 4e-05 0.01 18.1 0.9 2 23 899 920 898 920 0.97
12 29 2.6e-05 0.0067 18.7 2.4 1 23 926 949 926 949 0.96
13 29 0.002 0.51 12.8 6.3 1 23 955 977 955 977 0.99
14 29 8.5e-05 0.022 17.1 2.6 1 23 1083 1105 1083 1105 0.99
15 29 2.2e-07 5.6e-05 25.2 1.4 1 23 1111 1134 1111 1134 0.96
16 29 3.6e-07 9.4e-05 24.5 0.9 1 23 1140 1162 1140 1162 0.99
17 29 3e-06 0.00078 21.6 2.1 2 23 1266 1287 1265 1287 0.97
18 29 9.2e-07 0.00024 23.2 1.4 1 23 1293 1316 1293 1316 0.97
19 29 0.16 41 6.8 5.5 1 21 1322 1342 1322 1343 0.94
20 29 0.00019 0.049 16.0 2.6 2 23 1472 1493 1471 1493 0.96
21 29 6.7e-07 0.00017 23.7 2.3 1 23 1499 1522 1499 1522 0.96
22 29 2.3e-06 0.00059 22.0 1.8 1 23 1528 1550 1528 1550 0.99
23 29 1.5e-05 0.0038 19.5 1.4 3 23 1664 1685 1663 1685 0.97
24 29 0.017 4.3 9.8 1.9 1 23 1692 1713 1692 1713 0.98
25 29 0.00023 0.059 15.7 0.1 1 23 1719 1742 1719 1742 0.97
26 29 0.00012 0.031 16.6 0.5 1 23 1748 1770 1748 1770 0.97
27 29 4.7e-05 0.012 17.9 1.5 2 23 1806 1827 1806 1827 0.98
28 29 6.5e-06 0.0017 20.6 0.2 1 23 1833 1855 1833 1855 0.97
29 29 0.0041 1.1 11.8 6.3 1 23 1861 1883 1861 1883 0.99

Sequence Information

Coding Sequence
ATGCCTCTGGGGTTCTCCAAAGCATGCCGAACATGTTTAACATTGGACGGGACGCTTATTTCCATCTACGATTCAGATGGCTACGATGGCCAAGGACGTATTAAAGACATGATTGAAGAGATCACAACAATTACTCCCATGAAAACTGATGGTCTACCTGAGCTGGTTTGCCAGACCTGCTTCAATGAAATCAATAGATGCTTTACTTTTAAGGTGAAATGCATTAATTCGGATAGTACGCTTAGGAAACTCTTTGCAGCCGATGAAGAAACAGGTCACCAACAGGTGCAAACCGAggagttttataaaaatcaacGTGTGCCCATCATCGATAGCTTGATTTTACTTAAACGTGCGGTTGAGCAACCAGCAGTTGCTATTAAAACCGAAGAAATTCCTGCCCACGAttcattctcttactttgttaTTACTCCCTTGGATGAAGATAGTGAAACTGAAATACGTGAAGTCCCATTCGAGGGAAGAATAGACAACGttaaaattgaagaagaaaGCGGGGATGATTGCGATGAAGATAATACTTCACATACTAAACTTTTTACTGGTGTCAAAAAAGATGAAATGTCTTCCTTAGACGACTCTCGAAGTATGCACAACGATTCACCTGAACCAATAtgtgtcaaaataaaaactgaGCCAATCGATGAATCCATCCAATTTGAGGCAGCAGTCGACGGAATGAAAGTAAACTCGACAGAAAATCAAATTAGTCCTTCAAGGCGCTCCTATCAATGTCCTAAGTGCGAAAAAGTATTCAAGTACATATCACGTCTCAATGAACACCTACGAAGTCACAGCTCTGAAAGACCATTCGACTGCCATATTTGTGGCAAAAACTTCAAACAAATCAACCATGTCATGACTCACATCAAGTTAAGCCACAAAAAGAAACCCTTTAAGTGCGCAAAGTGCATTCGATGCTTTGCCAGTAGGTCACTTCTCAAAAAGCATcttaaaacacacatttcaaagGATAAAGCTTTTCCTACAAAGCAAAGTTTAATACCAGAGAAAACTCTGAATGATAAACAATATCTTGAAGAAGAACAACTCTTTGATAATGAACCAGTCTCCGATGATGAACTGCCATCGGATGATGGAAAACCTTTTGATGATGGAGAATCTTTTAACGAAGAACAACTATTAAATATGGAACAGGAATCACTTTTCCCGCAAACAGACAACAACACTGTGGATCCTTCTGACGAACAACAAACTACTAGCGATGGAATGAAAAAACAACAGGAAATTGAAACTCAACATGAGAACATTCCAAAACCAAATGATCAACAAGAAGATGATCATACAACTGTTGGTATGTCCTCGTCGCGACGTTCAAATCGGGCAAAAAAAGAAGTAATATATTCTTGTGATGCTGAGGAGACCCCTCCGTCCCACTCACAGACCAAAAATGAAACCGATAAAAAGGATGATGATCTTACAAACAATTTTGAGTGCCCTATATGCAAAAGAGacttcttttttgtttcgcGTCTTACTGCACACATGCGTTCGCACAGCGAGGAAAGGCCTTTTCCGTGTTCCATGTGTAATAAGTCTTTCAAACTGGATGGGAATCTTCAGAGTCATATCATGATATGTCACAAGAAGTTGAGGCCCTACAATTGTAGTGAATGCTCAAGGACTTTTTCTTGTACTTCAAATCttagaaagcatttgaaaataCACAATAAAACGTTAACTCGTAGAAAGCCTAAGCGTCGTACTCTCAAAAAGAAGAACCAAAAAAAGCAACCAACAAACGACATAAATTTCGAGCAGAATGTAGAACAAACCGAAGGCATAAACGAGATGGAAGAAGTCCCTGAGGGACAAGAGAATTCCCAAGAAAATGTATCACAAGAGCTAGATGTTGCAAAAGACAATGTTTTACTGACAGTTAAATGTCAGTTGTGTTCTGCATCAGTTTCCCCAGATAATTTGACAGAGCATATGCAAGATACGCATAACTTACCCGAATCAACCAGTGTTgttttaaaatcacaaaaaattaagaatccAGATCATTCCAATCAATCTGAGCTTGAAATTCAAGCTGCTGACCATTCACAATCTCTAAATGAGTTGAAAAGTAACTACAAGTGTACTATTTGCGATAAACtattTCCTTTCAATTCACGTCTCAAAGAACATATGCGAACTCATAGCAATGATAGGCCGTTTGAATGTTCCTTGTGTGACaaaagttttaaacaaaaatgccaCTTAAAGAGTCACATTTTAATTAATCACAAGAAACTAAAGCCGTTCAAATGTACTATGTGCTTCCGGACCTTTTCCAGTTCTTCAAATCTAAAACAGCACATGAAAACACATTTTGGAAATGGTAGACGCAAGCATAGGAAGCATCCGCAATACACTGTGGAGGAAAGCCCCGATAGTCAAAAACGACTATCTGATCTAAACGCAGAACTAAAAAATTTGTCAATGGCTCAGGAGGAAAGTCAGCCCAAACAGAATCTTGAAGTTGATGTCGAGGACGAAACTGAAGTGGAAGCCGCCGCCgtagttgaagttgaagtggaAGTTATCGAAGACGAAATCGATATGAACGACAAAATGGCATACGAGTCACCAGTTAAGACACCTTTATCATCTCCAAATTCAACAAACCAATCAAATATGCTTACTTCAGACACGAGTCATCCAATCCAGTGTCTTCAGTGCAATAAAGTGTTTTCCTATGTATCGCTTCTCAGTAAGCATCTCAAAACGCACAGCGATGAGAGGCCATACGCATGCTTAAGTTGTGaaaaaactttcaaacaaaGCTCTCACTTAAAGTCGCATATAATGATTCGACATAAGAAATTGAAGCCATTTAAGTGTCAAGAGTGTTTTAGACTTTTCTCTTGTAATTCGAATTTAACGAAGCATATGAAAACACACAACGGTAAGGGTAGTTGCAGAAAACCCAAAATGAAGCGCTTGATTCACAGAAGGAACATCACCCCAATAAGCGAATTTGCTCCGATAGAGTTAGATATTGAGAGCGAAACTGGACACGAACTTGAAGTTGAAGGAAATATTGATTTTAAcgaaatcaaaaacaaagtttCAGTATCCGTCAGAGATACTGAGTCTTCTTCTGTAAAATCCCTCCAAGAACAGCCAAATTCAAGTAAATTAGAGAAGCAAAAGAATTCTACAAAATCAGATGAGGTTCAAATATTAAAACCACTTGCCAGCACAACATCACCACCTTTCCAGTGCTATCAATGCAACAAAGaATTTACATTCATCTCCCGGCTAAATGAACACATGCGGACCCACAGCGATGAGAGGCCGTTCATTTGTtcaatatgtggcaagaccttCAAACAAAATGGTCACCTCAAGACTCACATTATGATTAGCCATGATAAATTCAAGCCCTACAAATGTGAAGATTGTCCACGAGAGTTCTCAAGTAACTTTAACCTCCAAGTACATTTGAAAACGCACTGCGCAAAGGGCAATCGAAGGAGAGCCAGGAGAAATAATGATTATCTGGAAGAGCCTCATAACATAACTTCCGAAGAAGGAACAACTGAAAGTGACAACATTTCACAACAGAACATTTACGGAAATCTAAGCTTTTGGGATGATAGCAACCAAGTGTCAGGAAGTTCATTATACTTAACACCACGCCACTCTCAACAAAATCAGAGCACACCGCAATCGAAAAAAGTTGCTCTTAAGTCTGTACATGCAAATATTGATTCCATACCAAAAGAGGTAGACAACTCATTAGCTAACACAACAAATCCGCTTCAGTGCCACCTGTGCAACAAAGTTTTTACATATTCCTCGGCTCTCGGTAAACATTTAAGAACACATAGCGATGACAGACCTTATGTTTGTTCATTATGTGGAAAGACTTTTAAGCAAAGTGGACATCTTAAATCTCACGTCATGATAAGTCATGATAAAatcaaaccctacaaatgtgAGAAATGTTTCCGAGATTTTTCCAGTAATTATAATCGTAAGGTGCATAAATGTAAATTTTCAACTACCGGCAAAAGTCACCGACGAAGTGGATCAAAGTCAAATGCTCAAGATATCACATCAAACGAAGACATTGAGGAACTACTTCATCCTGCCAACAATGGAGAAGAGAATACAGTTGAGAAGACtaaaaacaatccaaaaaaTACGGTCGATGGATCAagtaaaatacaacaaaaaagaaatagatgTTCGATTTGCTACATTCCTGTTGAGCTTGAGCATTTAACCGAACACATTCAACAATTTCATAATTCACTCGGCTCAACAAGTACTACAATAATAAAACAAGAGCCTCTGGATGAGCCTGAACATGAAGGTCATCCATTATTCGACACATTGTCAAACCAGATAGAGACTGGCGATGGGTCGCAATCACTCCATTGTACTGAATGCAACAAGGAATTTACGTATGTTTCGCGACTCACCGAACACATGCGATCTCATAGCGACGAAAGGCCATTCATCTGTACAATTTGTAACAAAAGTTTTAAGCAGAAAGGCCATCTCAAGAGCCACATTATgataaatcataaaaaaatcttACCTTATAAGTGTAATGAATGTCTACGGTCATTTCCGAGCAGATATAATTTGAAGATCCATCTAAAAACACACCGCAGCAAACGGCGTGCTGCTATAAAAAAGAGCTACTACAAGGATCCTCCTTACCATGGCAAGACATTGTCAAACACAAGCCCAGAACATGACCAGTTATTAACAAAAGAGAACACCCATGAACATACCGATGTATTTTTGGCTCAAGACATAATCAACAAAACTATTGAAAACCAATTTGCATTAGAAAGAGAAAAAGTAGAGACTGCACGCATGGAATTACCTCAATCATCAGGTGTTCAAGTAAAGAAGGAACCTTCAGATGCGCTACAACAAACAGAAAACTTTCTCCATGGTACAATTCCAAATGACACAGAACAACCACAAAGTTCACTGCTTTGCTTGGTATGTGGAAAGACTTTCGAACGTCAAGGTCAGCTTCGGCATCATATAATGATGAAACACGGCAAACGAATAAAACCTTTTAAATGTAAAGAATGCCCTCAATTGCTATCACTTTCGCATCTTAAGGAGCATATGAAGATCCATACTAGCGACCAGCCATTCATCTGCTCTCTGTGTGGCAAAGGTTTTAACAATGATACTGAGCTTTCTGCTCACCTTATTACGAGTCATAACAGATCTGAGCCATTTAAATGCGACATATGTGCAAAAACCTACAAATCTAGCACAGGACTCAAAAATCATCTTGTGATTCACAGTGATTATCGCCAACAAATGCGCAAAGCTATTCGCGCGGAACGAAAACAAAAGACCCACACAGAAGCTCATGAGTCAGTGAGTTATTCAGAGCAAGGGCTGCCGCAGTGTAAGATTTGTAAAAAAGAGTTTACAAATAACTGGGTTCTGAAGGACCACATGAAATCTCACACAAATGAAAAACCATTTGTATGCCCAATTTGCGAAAAGGGTTTCAATAAGAAATACAATCTCAAAATTCACGTTATGGctcacaagaaaataaaaccattCAAGTGTGATTATTGTAATCAATCGTTTTGCACGAATGCTGGCCGGAGAATACATCACCGATCTCACATGCGCAATAACGACCAGACAATAGCAGTAGATGCAATAAATAACTCTTAA
Protein Sequence
MPLGFSKACRTCLTLDGTLISIYDSDGYDGQGRIKDMIEEITTITPMKTDGLPELVCQTCFNEINRCFTFKVKCINSDSTLRKLFAADEETGHQQVQTEEFYKNQRVPIIDSLILLKRAVEQPAVAIKTEEIPAHDSFSYFVITPLDEDSETEIREVPFEGRIDNVKIEEESGDDCDEDNTSHTKLFTGVKKDEMSSLDDSRSMHNDSPEPICVKIKTEPIDESIQFEAAVDGMKVNSTENQISPSRRSYQCPKCEKVFKYISRLNEHLRSHSSERPFDCHICGKNFKQINHVMTHIKLSHKKKPFKCAKCIRCFASRSLLKKHLKTHISKDKAFPTKQSLIPEKTLNDKQYLEEEQLFDNEPVSDDELPSDDGKPFDDGESFNEEQLLNMEQESLFPQTDNNTVDPSDEQQTTSDGMKKQQEIETQHENIPKPNDQQEDDHTTVGMSSSRRSNRAKKEVIYSCDAEETPPSHSQTKNETDKKDDDLTNNFECPICKRDFFFVSRLTAHMRSHSEERPFPCSMCNKSFKLDGNLQSHIMICHKKLRPYNCSECSRTFSCTSNLRKHLKIHNKTLTRRKPKRRTLKKKNQKKQPTNDINFEQNVEQTEGINEMEEVPEGQENSQENVSQELDVAKDNVLLTVKCQLCSASVSPDNLTEHMQDTHNLPESTSVVLKSQKIKNPDHSNQSELEIQAADHSQSLNELKSNYKCTICDKLFPFNSRLKEHMRTHSNDRPFECSLCDKSFKQKCHLKSHILINHKKLKPFKCTMCFRTFSSSSNLKQHMKTHFGNGRRKHRKHPQYTVEESPDSQKRLSDLNAELKNLSMAQEESQPKQNLEVDVEDETEVEAAAVVEVEVEVIEDEIDMNDKMAYESPVKTPLSSPNSTNQSNMLTSDTSHPIQCLQCNKVFSYVSLLSKHLKTHSDERPYACLSCEKTFKQSSHLKSHIMIRHKKLKPFKCQECFRLFSCNSNLTKHMKTHNGKGSCRKPKMKRLIHRRNITPISEFAPIELDIESETGHELEVEGNIDFNEIKNKVSVSVRDTESSSVKSLQEQPNSSKLEKQKNSTKSDEVQILKPLASTTSPPFQCYQCNKEFTFISRLNEHMRTHSDERPFICSICGKTFKQNGHLKTHIMISHDKFKPYKCEDCPREFSSNFNLQVHLKTHCAKGNRRRARRNNDYLEEPHNITSEEGTTESDNISQQNIYGNLSFWDDSNQVSGSSLYLTPRHSQQNQSTPQSKKVALKSVHANIDSIPKEVDNSLANTTNPLQCHLCNKVFTYSSALGKHLRTHSDDRPYVCSLCGKTFKQSGHLKSHVMISHDKIKPYKCEKCFRDFSSNYNRKVHKCKFSTTGKSHRRSGSKSNAQDITSNEDIEELLHPANNGEENTVEKTKNNPKNTVDGSSKIQQKRNRCSICYIPVELEHLTEHIQQFHNSLGSTSTTIIKQEPLDEPEHEGHPLFDTLSNQIETGDGSQSLHCTECNKEFTYVSRLTEHMRSHSDERPFICTICNKSFKQKGHLKSHIMINHKKILPYKCNECLRSFPSRYNLKIHLKTHRSKRRAAIKKSYYKDPPYHGKTLSNTSPEHDQLLTKENTHEHTDVFLAQDIINKTIENQFALEREKVETARMELPQSSGVQVKKEPSDALQQTENFLHGTIPNDTEQPQSSLLCLVCGKTFERQGQLRHHIMMKHGKRIKPFKCKECPQLLSLSHLKEHMKIHTSDQPFICSLCGKGFNNDTELSAHLITSHNRSEPFKCDICAKTYKSSTGLKNHLVIHSDYRQQMRKAIRAERKQKTHTEAHESVSYSEQGLPQCKICKKEFTNNWVLKDHMKSHTNEKPFVCPICEKGFNKKYNLKIHVMAHKKIKPFKCDYCNQSFCTNAGRRIHHRSHMRNNDQTIAVDAINNS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00976986;
90% Identity
iTF_00976986;
80% Identity
iTF_00976986;