Mqua005905.1
Basic Information
- Insect
- Melangyna quadrimaculata
- Gene Symbol
- Hr39
- Assembly
- GCA_949320155.1
- Location
- OX439483.1:99808879-99820991[-]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.28 1.1e+04 -2.5 0.7 111 116 42 47 4 115 0.54 2 4 1 4.1e+04 -4.3 7.5 54 154 232 338 199 364 0.46 3 4 2.1e-15 8.6e-11 44.0 4.3 1 151 459 600 459 616 0.61 4 4 1.2e-78 4.9e-74 252.3 0.2 200 408 611 812 600 812 0.96
Sequence Information
- Coding Sequence
- ATGTCATCATCAATAAAGACCGATTCATCCGCATATAATGCTGCCCATGGCAGCACAATTACAAATATTGTTGGTGTCCAACAATCATCATCATCGACGACAACAACattatcatcatcgtcatctATTATCCGCAACAATGTCTCCGTAACTAACATCAAATGCGAAGAAGATcgccacagcagcagcaacagtaGTCCTCTGCGGCAAACTCATCCATCGTCTATTGTCACAACAGCCTACTACAATCAAGGCAATGGAGCCATCCGAATTCCGGTTAGTAAACGAGATGATTCTGACTCGGAGAGTGAATTGTCGCATATTGAAAATCTCAAAGTCAATCGTAGATCAGTCAGCCAAGCtgtgaaaaatggcccaagGCCAATGTCATGGGAGGGAGAACTCTCCGACACCGAACCCGATCCGATGGACACAGAAAACTCAACCAGTTGCGACAAGACTTTCAAGAGTGCACCTATCACTGTGATCAAAAACGATCCGGATCGGAAGCCCAATCTCGATCAGATTTGCCTCGACATTAATTCATCACACTACATTAGCAAGAAGCCACAGAGTGATCCTATTAATCTTAAGTATGAGCCAGGACTTCTGGCCGATCCCACCGGCACCAGTAACTCACCATTGCTTGCACGTTCCAAGACAACAGCCAATTTGTTGCCTGCCAATCCTAGCCCCGATTCTGCCATTCATTCCGCGTACACGCACAGCTCACCAAGTGAGTCGCCCCTAACATCCCGACACGCCCCCTATACACCCTCACTGAGTCGCAATAACAGCGATGCGTCGCATAGCAGTTGCTATTCCTACAGCTCGGAATTTAGTCCGACCCACTCGCCCATTGCCGGCCGCCACAATATGTATGGCAACTATAGTGGCGGTTCTCTTCATCATTCCGTTTTATATCGGCCGACGATTTCGGACAGCGGCAGCAGCACTGCTAGCTGCTCCTCGTTGGATCCACAGAATCTTTCACAATCACAAGCCGCTGTTGTGGCAGCGGCGGCGTCTGCGCTGGCCGCAGCATCCTCCACATCAGTCTCTGTGAATGGCACAACTCCGCCCGGGCTCAAGACCGAGGAGCTGCTGTTTGACAGTGAAGCCATCCCATCGGCGGGCATTTCGCGACAGCAGCTAATCAACTCGCCGTGTCCCATTTGTGGGGACAAGATCTCTGGCTTCCACTATGGTATATTTTCGTGTGAATCCTGCAAGGGTTTCTTCAAGAGAACGGTGCAGAATCGCAAGAACTATGTGTGTGTGCGAGGCGGACCATGTCCGGTAACTATCTCAACGCGCAAGAAATGTCCAGCATGTCGCTTCGACAAGTGCCTGCAAAAAGGAATGAAACTAGAGGCGATTCGAGAAGATCGAACCCGTGGCGGTCGCTCTACTTACCAGTGTTCTTACACCCTGCCCAATTCTATGCTGAGTCCATTGCTTAATAATGACCAATCAaatcagcagcaacaacaacaccaacaacagcaacaaagtGGCGCCTCTCGCATGGGAGTTAATGGCTTCGTCATCAAAACAGAGCAGCCAGACAGCAGCACGGGTGGAACATCGACCCCAACACCAGGAAGTAGTAACTATCAACGTTCCACAAGTCACGACATCCCCACCCTGCTGCAGGAGATAATGAACGTTGAACATTTGTGGCAGTATAATGCAACTGAATTGGCACGACTGAATCAACCGTTGTCGGCGTCGTGTTCGTCTTCGACTTCGTCATCATCGACATCGGCGACAGCGGCTCCGTCTGGTAATATTGCCTCAAATCCGCTGCTGGCCAGTGCCGGTCTTTCATCGAACGGAGAGAATGCTAATCCCGACTTAATAGCCAACCTGTGCACAGTTGCTGACCACCGATTGTTTAAGATTGTCAAATGGTGCAAGAGTTTGccgctttttaaaaatatttctattGATGATCAAATTTGCCTGCTTATCAATTCATGGTGTGAACTTTTATTGTTTTCATGTTGCTTTCGATCAATTGATTCACCCGGTGAGATCAAAATCTCACAAGGCAAGTCAATAAATTTGGCTCGAGCGAAGTCGAATGGTTTGCAGtCGTGCATTGAAAGGATGCTCAATCTGACAGACCATTTACGACGATTACGAGTCGATCGATATGAATACGTTGCCATGAAAGTAATCATTTTACTTCAATCAGATACATCAGAATTGACCGAACCGGTCAAAGTACGTGAGTGTCAAGAAAAAGCATTACAATCTCTACAAGCATATACGTTAAACTTTTATCCTGAAATGCCATCGAAATTTGGTGAACTGCTATTGAGGATTCCAGAGTTACAAAGAACGTGtcagCTTGGCAAAGAGATGCTAACTATAAAATCTCGTGACGGTGGTGATTTCAATTTACTCATGGAACTTCTACGCGGAGAACATTGA
- Protein Sequence
- MSSSIKTDSSAYNAAHGSTITNIVGVQQSSSSTTTTLSSSSSIIRNNVSVTNIKCEEDRHSSSNSSPLRQTHPSSIVTTAYYNQGNGAIRIPVSKRDDSDSESELSHIENLKVNRRSVSQAVKNGPRPMSWEGELSDTEPDPMDTENSTSCDKTFKSAPITVIKNDPDRKPNLDQICLDINSSHYISKKPQSDPINLKYEPGLLADPTGTSNSPLLARSKTTANLLPANPSPDSAIHSAYTHSSPSESPLTSRHAPYTPSLSRNNSDASHSSCYSYSSEFSPTHSPIAGRHNMYGNYSGGSLHHSVLYRPTISDSGSSTASCSSLDPQNLSQSQAAVVAAAASALAAASSTSVSVNGTTPPGLKTEELLFDSEAIPSAGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCVRGGPCPVTISTRKKCPACRFDKCLQKGMKLEAIREDRTRGGRSTYQCSYTLPNSMLSPLLNNDQSNQQQQQHQQQQQSGASRMGVNGFVIKTEQPDSSTGGTSTPTPGSSNYQRSTSHDIPTLLQEIMNVEHLWQYNATELARLNQPLSASCSSSTSSSSTSATAAPSGNIASNPLLASAGLSSNGENANPDLIANLCTVADHRLFKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSIDSPGEIKISQGKSINLARAKSNGLQSCIERMLNLTDHLRRLRVDRYEYVAMKVIILLQSDTSELTEPVKVRECQEKALQSLQAYTLNFYPEMPSKFGELLLRIPELQRTCQLGKEMLTIKSRDGGDFNLLMELLRGEH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00311850;
- 90% Identity
- iTF_00694670;
- 80% Identity
- iTF_00974792;