Mper002939.1
Basic Information
- Insect
- Melanchra persicariae
- Gene Symbol
- retn
- Assembly
- GCA_947386135.1
- Location
- OX376660.1:13429781-13435181[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8e-19 4.1e-16 59.6 0.0 14 89 14 87 8 87 0.91 2 2 5 1.1e+04 -2.7 0.0 25 38 215 228 177 230 0.58
Sequence Information
- Coding Sequence
- ATGGTTGTCAACGTAATCAGCTTTTCTTCTAAATTTATCGTCACTGGCTGTACTCCAATCAACCGGCTACCTATAATGGCGAAGTCGGTGCTGGATCTGTACGAGCTGTACAACCTGGTAATCGCTCGCGGTGGCCTGGTGGAAGTCATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGACTGAGGCTGCCGTCGTCCATCACGTCCGCTGCCTTCACGTTACGCACACAATATATGAAATACCTGTATGACTACGAGTGCGAGAAGAAGAACCTATCCACCAGGAGCGAGCTGGATGCAGCCATCGAAGGCAACAAGCGGGAGGGGCGCCGCGCTTCGGGACAGTACGACGCACAAGCTGCTTTAGCCATGCCCCCACTAAACCGCGTGCCCGCGTCTCTCGCGCAGCTGTCGCAGCACATGCAGCCGCTGTCACTGTCGCTGGGTGGCGTCGCGCCGCGCCTGCCGCCGCTGCCGCCGCACGCGCCGCACCTCGCGCAGCACGACATCGAGTACCGGGTGCGGGAGTACATGAAGATGATACAGCAGCAGAGGGAGCTTATGAGAAATGGCTCCGAATCGCCCCCCAGCAATGGTCCAGCGCCAATTATGTCACCTCGCGATGCAGCCGCCCTTAGTGCCATCGACGTCTCTCGCCTCACTCTCTGGTCCCTCTACAACAATAACAACAACAACAGCCCACAACCTGACCTTGAGCCACAACGCGAGGCTCTGAACCTGAGCGAGAGCCCCAACTCCCTGTCGGGCGGCGTGAAGCGCGAGGCGTGCCGCTCGCCGCCGCCGCCCGCCAAGCGCCGCACGCCGCGCCCCGCCAGCCGCGCGGCCTCCCCGCGCTCCGACCTGCTCGAGCCGCCGGCGCCGCAGCTGCGCCACGCGCGCCGGGACGCCGCCGAGCCGCCGCAGATCAACGGCATGCCCAACACTAATGGAGTTAATGGAGCTGCCTTCAAGATTACTACTAGAGGAGACGCGACGACAGGAGACCAACAACTAGTGGTATCAATAGAGCTGAACGGAGTAACGTATGAAGGAGTACTATTCCCCTCTGGCAACGGCCAGAACGGACACAGACAAATGGTGTCTTAA
- Protein Sequence
- MVVNVISFSSKFIVTGCTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRVPASLAQLSQHMQPLSLSLGGVAPRLPPLPPHAPHLAQHDIEYRVREYMKMIQQQRELMRNGSESPPSNGPAPIMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPQPDLEPQREALNLSESPNSLSGGVKREACRSPPPPAKRRTPRPASRAASPRSDLLEPPAPQLRHARRDAAEPPQINGMPNTNGVNGAAFKITTRGDATTGDQQLVVSIELNGVTYEGVLFPSGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01029938;
- 90% Identity
- iTF_01025756;
- 80% Identity
- -