Mpla013624.1
Basic Information
- Insect
- Meiosimyza platycephala
- Gene Symbol
- lrrfip2_2
- Assembly
- GCA_963662105.1
- Location
- OY759209.1:68777515-68778738[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.83 6.7e+03 -3.1 0.9 54 75 3 24 1 29 0.78 2 3 5.6e-103 4.5e-99 332.4 27.0 1 299 33 331 33 332 0.90 3 3 0.15 1.2e+03 -0.6 3.1 134 163 365 394 336 406 0.51
Sequence Information
- Coding Sequence
- ATGGATAGCACCAGTACCAGTATCGCAGGTAGACGACGTACAAGTTCTTCCCGTGTCAATGCTGAGGATCAAGCGCTTGACCAAATCGCTAAAGAGGCAGAAGCTCGACTGGCAGCACGTCGGCAGGCGCGTGCTGAGGCACGAGAAGCTCGTTTGCGGGAATTAGAACGTCAGCAAAAGAAACAAGAACAGAATGCAGATCGTGTTTTTGATATTGGCAGCGAATCTTTGGCCCGCTCACGTATTGTGGCTGGCCTAAGTATTGGAGGCGGTGGAAGCAGCAGTATTTCTGTGACACGTGCCAGCTCAATGTCCTCCCGGCGCAGCAGTGAAGATTCTTTGCAGGATGAAGAAGCAGCGGCGGCAGGACGTAGCTTGCGTGATTTGCGCCATGAACTACGCGATGTAGAAGAACGCTTCCGTAAAGTGATTATTGCTAATGCACAACTAGATAATGAATGCGCTTCGCACGTGTATCAAATACAGTTTCTTAAAGATAAATTCGAAGAGGTCGTAGAGTCATATGCGCTGCTACAGCGTGAATTTAAGGAGAAGAGTAGAGATTGTAATGCTCTAAAACGAGATGTGGAAAAATTGCAGGAGGAATTCAAGTTGGTGCAAGGTCAATTGGAGGAACGTGATACGCTCATCACAGAACAAGGTTTGGTCATCATCTCTGTAGAAAATAAAGATGGCACAGATGCCAAGCGTGCTCTAGTCACTATAGATAATGCACAAATCTTAGGTTCTGTGCAAGGTTCTCTAGATATGCGACTGAAAAAATTCAATGAGGAAAAACAACAGCTCGTAGCTGAAGTACAAAACTTACAGCAGCAGTTGGACAGTTACAGACAACAAGGCAATAAAGGCCGACATGGTAGCAGCTTTATGAATGGGCTCGAATCAAATGATGAGTACGATGCACAACGAGAAGCTAATAAAATATTATCTGATTACAAATACAAGTTGCAAAAAGCAGAACAAGAAGTTGCTAGTCTACAGGCCAGTTTAGCAAGATCGGAAACGCAAGTGATACGTTATAAAAGTACATCAGAGGCAGCTGAGAAAGCAGAGGctgaattaaaaattgaaaggaGAAAATTACAACGAGAAAATCGGGAGGCAATGGAACATTTAGAAGAATTGGAAACATCAAATAATCACCTGCTTAAGCGTTTGGACAAATTAAAGAATGCGAAAAGTGCACTGCTTAAGGATCTCTGA
- Protein Sequence
- MDSTSTSIAGRRRTSSSRVNAEDQALDQIAKEAEARLAARRQARAEAREARLRELERQQKKQEQNADRVFDIGSESLARSRIVAGLSIGGGGSSSISVTRASSMSSRRSSEDSLQDEEAAAAGRSLRDLRHELRDVEERFRKVIIANAQLDNECASHVYQIQFLKDKFEEVVESYALLQREFKEKSRDCNALKRDVEKLQEEFKLVQGQLEERDTLITEQGLVIISVENKDGTDAKRALVTIDNAQILGSVQGSLDMRLKKFNEEKQQLVAEVQNLQQQLDSYRQQGNKGRHGSSFMNGLESNDEYDAQREANKILSDYKYKLQKAEQEVASLQASLARSETQVIRYKSTSEAAEKAEAELKIERRKLQRENREAMEHLEELETSNNHLLKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00972192;
- 90% Identity
- -
- 80% Identity
- -