Mpla023297.1
Basic Information
- Insect
- Meiosimyza platycephala
- Gene Symbol
- -
- Assembly
- GCA_963662105.1
- Location
- OY759211.1:18692083-18706976[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 6.3e-11 1.3e-07 32.0 0.0 1 38 595 633 595 638 0.89 2 4 2e-13 4.2e-10 40.0 0.1 2 39 650 687 649 690 0.94 3 4 2.3e-17 5e-14 52.6 0.0 1 45 704 749 704 749 0.98 4 4 1.4e-19 3e-16 59.7 0.0 1 44 756 800 756 801 0.96
Sequence Information
- Coding Sequence
- ATGGCTATTTTGAAGAACGATCAAGTTGAGTGGTTGGATGAAGATAATTTGGATCTGACCAATATGTCTTTGATTAGAGACGATGAAGAGGACTGGACTTTGATAGAAACACCTATCAGTGGTGTTGAAATGTCTTTACACTGCCCATGGGATATACTTGATTTCATTGTTGCTTTTTTATCTAAAATCTGTATTTCAAGTAATAAAGGTTTGTTACGCACTGCCGAACAACTGAAAATTAAAGGCCTCTGCGAAACCGCCGAGAACACAGACGACATTGCGGACGCTGCTACAGCAACGATTACCGTGTCCGAAAATATTCAACAAGCCGTTGTTGGTAACATTGTCAATACAACGGTAGCCCAAGGTCTACCTTCACCTACAATACAACATCAGCAACATcttcagcaacaacaacaacagcagcaacaacagcaacaacagcaacagcagcagcagcaacaacaacagcagcagcaacaacaacagcagcagcaacaacaacaacaacagcagcagcaacaacaacaagtagtTAGTAATGCCGCAGTGCTGACACACACAATAGCAAATGTGAATGCAACAAATGCGCAAACATTAGCAGCAGCTAGTGGAAGTATTGGAAACGTTGTTGCCACCGCAGGCACATCAGGCCAAACACAGCAATTAACACGTAAATCACGTGTACGCAAGCGTTCTAAGTCGCCTGActtacaacaacagcatcatcaacaacaacaacatccacAGGCAATTcttattcaaaatcaaaatcaaactGCTATCGTGAGTCTGCAACAGACATCATCTGGAAATTATATACCAATAACAGCTGGTGGCCAAACAGTGACAACAACAGTAGCTGCAGTCGCCGCTGCTGCACACCAACAACAACTCGACGACTCGGACACGGATAAACCgtcattacaaaaaatttgtaaaacagAAGCGTCTGCATCGTCGCCTGCATCTTCGGGTTCGTCATCAAATAATGGTGGCAGCGTAACAACAGTAGCAGCACCAGGAACAGCAATAGTGACACAAATTGTAGTAGCACGTGACGGCAAAGATAAAAATATGACTAGTTTAGGCATGGGCATGAATGGCGGCCTACTTGGTGTGCCAATgggatttttagattttgcacCTGAACCACCAGCACCATCGGCAACACCTGTTACTGTAACGGAACACGTTGATCTATCATGTAATCCTAGCACCGATACTAGAGATTTATCAAATCCCACCGAACCGCTCGATATCGACAATCATCTCGCACAGCATATGATCCAACGGCTTGATCAATCCCCTATGCATACCATACATCATCAAACTGGCGACGAAAGTAATTCAAATCTGGTGCAACACATTAAAAGTGAAATAATTGAAGttaagcagcaacagcaacatcatcaaACACAGCATCAGTTGCATACGCAGCAAACTATAGTGCAGGGACAATCtcagcatcagcaacaacagcagcaacatcagcagcatcaacagcaacagcagcaacaacagacGCATCAGGAAATCTCTGGTGCGACTGTTATGGAGATTGATCCAAGTCAAATCAAACATGAGCCCGGAATGATAATAACGCCAGAGATTGTTAACATGATGACCACCGGTCATATGGATATGTACAACTCCGACACGAGCGAGGATTCAATGATGATCGCCAATGGTTCACCCAACGATAATAATGAGCCACACTACACCAATTTGGACCAACAGCACGGCGATAACAAAGGTCAGTTTAATGGTCCCAAAACTTGGACACAAGATGATATGAATTCAGCTTTAGATGCACTGAAGAATCAAAACATGAGCTTGACGAAAGCATCCGTTACCTATGGCATCCCGTCGACAACACTGTGGCAGCGAGCACACCGCATGGGTATTGAAACGCCGAAGAAGGAAGGCGGTACAAAATCATGGAATGAGGATTCGTTAAACAGTGCATTGGAAGCTTTACGCACTGGACAGATTTCAGCAAATAAAGCATCCAAAGCTTACGGTATTCCGTCCTCGACACTGTATAAGATTGCACGTCGTGAAGGTATTCGCTTGGCGGCACCATTTAATGCGGCGCCTACAACATGGACGCCTGAAGATTTGGAACGTGCATTGGAGGCCATACGAGCTGGTCATACGTCCGTCCAAAAGGCCAGTGCTGAATTTGGTATCCCAACAGGAACACTTTATGGACGTTGTAAACGTGAGGGTATTGAATTATCACGTTCAAATCCAACACCATGGTCTGAAGATGCAATGAATGAGGCATTGAATTCAGTGCGCGTTGGCCAAATGTCCATCAATCAAGCGGCCATACACTACAATCTACCCTACAGTTCACTATATGGACGCTTTAAGCGTGGCAAATATGATATATCAAATACCAGCGGAACCTCCATTAATAATACATCAGGAAATACATCAGGAAGCATTGAGATCATTGAACATAGTCAAGAGAATTCTTTACACATGTTTCAGCAACAGTTCCAGTATAGTCCATCGCctcatcaacaacagcagcaacaacagcagcagcagcaacatcaacaacaacagccgcAAACACCACAACATATACAACATGTTGTACACattcagcagcaacaacatacaccaagccaacaacagcaacatcaccaacagcaacaacatgcGCAACATATCCAACAGCAACAAGATGTTGTAACATCCAGCAGTCAGGTGCAGCATTCAACACCAACAGGACaacaaattcaacaaatttatcATCATCATAGTACGCCAGAGAGAAGTTGA
- Protein Sequence
- MAILKNDQVEWLDEDNLDLTNMSLIRDDEEDWTLIETPISGVEMSLHCPWDILDFIVAFLSKICISSNKGLLRTAEQLKIKGLCETAENTDDIADAATATITVSENIQQAVVGNIVNTTVAQGLPSPTIQHQQHLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQVVSNAAVLTHTIANVNATNAQTLAAASGSIGNVVATAGTSGQTQQLTRKSRVRKRSKSPDLQQQHHQQQQHPQAILIQNQNQTAIVSLQQTSSGNYIPITAGGQTVTTTVAAVAAAAHQQQLDDSDTDKPSLQKICKTEASASSPASSGSSSNNGGSVTTVAAPGTAIVTQIVVARDGKDKNMTSLGMGMNGGLLGVPMGFLDFAPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEPLDIDNHLAQHMIQRLDQSPMHTIHHQTGDESNSNLVQHIKSEIIEVKQQQQHHQTQHQLHTQQTIVQGQSQHQQQQQQHQQHQQQQQQQQTHQEISGATVMEIDPSQIKHEPGMIITPEIVNMMTTGHMDMYNSDTSEDSMMIANGSPNDNNEPHYTNLDQQHGDNKGQFNGPKTWTQDDMNSALDALKNQNMSLTKASVTYGIPSTTLWQRAHRMGIETPKKEGGTKSWNEDSLNSALEALRTGQISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGHTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDISNTSGTSINNTSGNTSGSIEIIEHSQENSLHMFQQQFQYSPSPHQQQQQQQQQQQHQQQQPQTPQHIQHVVHIQQQQHTPSQQQQHHQQQQHAQHIQQQQDVVTSSSQVQHSTPTGQQIQQIYHHHSTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01200830;
- 90% Identity
- iTF_01486090;
- 80% Identity
- -