Basic Information

Insect: Megalocaria dilatata
Gene Symbol: -
Assembly: GCA_034642435.1
Location: CM067854.1:55504463-55506319[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 4e-09 2.7e-06 28.1 0.0 4 37 15 48 13 54 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	4e-09	2.7e-06	28.1	0.0	4	37	15	48	13	54	0.89

Sequence Information

Coding Sequence: atGGCCGGCGTGAACTCAAAGCGAAAAGCATGGAATACGGAGCTTATGGCGGAAGCCATAAAATTAGTAAAGGAGAAAAAAATGGGTTATTTAAGAGCTGCAAAACATTTTAATGTGCCAAGATCTACCTTGTTTAGATTATGCCAGAAAAGTGAATTTTCTCCAGAAGAAGCCGCAGCTACTACACTAGGAAGGAAAACTGTCTTAGGGACAACCCTTGAAAATCTTTTAGTAGACTACATTTTGTCGATGGAGAGCAAATTTCATGGCTTGACGAGAAACGATGTTCGAAGAATGGCGTACATGTTAGCTAGACGTAATCAGTTGAAAAATCCATTTGGTGAGACTGGTATGGCTGGCAAAAAATGgcttaaattatttctaaaacgccaTAAGGATAAGCTATCAGTGAGAAGACCAACTGGCACGTCTTTTGCTAGAGCTTTTGGATTCAGCAAGGAAAAAGTAGACTCATTTTTTGATCTCCTCGAAGGCGTCTATGCTCAAGGAAACTATGGTCCAAGTCGTATATACAACGTAGATGAATCTGGGCTTACTGTAGTACAAAGCAAGATACCCCAAGTGATTGGGCATAGAGGAAAACGGCAGATAGCTTCACTTACCTCAGCGGAAAGGGGTTCATTAATGACGATTGTTGTTGCCATGAACGCCACTGGTCATTTTGTGCCTCCCTTTATTATATTCCCACGCAAGAATATGAGTGATCAGCTGATGAGAGGCTGTCCCCCAGGCTCTGTTGGCGTTGCACATCCATCCGGATGGATTCAAATGAACATATTCACTGAATGGTTCAAACATTTCATCAAACATACAAACCCTACTCCGGAATCGAAAGTATTACTTATCTTAGATGGTCATTTTTCTCACACTCGAAACATCGACGTGATAGAGCTTGCTAGGCAAAACAACGTAGAAATTGTCTCCTTACCTCCTCACACAACTCACAAGCTCCAGCCACTAGACAAAACGTTTATGGGACCACTAAAAACGTATTACAGTGAGGCAATACGCATGTGGATTAGAGATAATAATCGACCACTAAGCCCTTATGATGTTGTTGAGTTATTTGGCAGAGCGTATTTAAAAGTGCAAACTGGTGAGATTTCAACAAATGGATTTCGAGTAACTGGCTTATggccattgaataaaaatatattcaccgAGGTCGACTATCTTGCTGCGCAGCAAGATGCAGTTAAAGATGGTAATACGGTCAACGTTCCATCAGGTCACCAACCTGAAGGACCATCGATGGCCAATTTAAGAACATCTGATAACTGTATGCCTTTAACGGAAGCATTCACACCCAGACAAGACATGAATATTGAACCTGTACCCTCAACTTCCGGACTTTCTCGCAGTGATTTAGGATTAGTGTCTCCATATGACATCAGTCCAGTACcaaagaagaaaatgaaatcttctaatAGAGGAAGAAAGGCATCTGTTGCAGCCGTCATTACGTCGTCACCGTACAAGAATGACCTTATAgacaaaagcaaaaaaaaagatgaaaaagaaaataaattggcaaaaaacaagaataaaaaacagaatgagaagaaatcaaaacatataaaatctaaagGGAAGTCTAAGCCTGAGTTAGATGCAGATGATGAGGAGGTGATGCTTGATACAGACAGTGAACCCGATGCTCTGATAGGTTATACAGCTCCAGACTCTGAAGATTCGGAGTGTATTTTCTGTGGCATgttgttttctaatgataccCATGGGGAAACATGGGTCAAGTGCCTCATGTGTGGGCTCTGGGCACATTATGATTGCGCTGGACCAGAATTTGATACCTGGATTtgtgatttttgtaaataa
Protein Sequence: MAGVNSKRKAWNTELMAEAIKLVKEKKMGYLRAAKHFNVPRSTLFRLCQKSEFSPEEAAATTLGRKTVLGTTLENLLVDYILSMESKFHGLTRNDVRRMAYMLARRNQLKNPFGETGMAGKKWLKLFLKRHKDKLSVRRPTGTSFARAFGFSKEKVDSFFDLLEGVYAQGNYGPSRIYNVDESGLTVVQSKIPQVIGHRGKRQIASLTSAERGSLMTIVVAMNATGHFVPPFIIFPRKNMSDQLMRGCPPGSVGVAHPSGWIQMNIFTEWFKHFIKHTNPTPESKVLLILDGHFSHTRNIDVIELARQNNVEIVSLPPHTTHKLQPLDKTFMGPLKTYYSEAIRMWIRDNNRPLSPYDVVELFGRAYLKVQTGEISTNGFRVTGLWPLNKNIFTEVDYLAAQQDAVKDGNTVNVPSGHQPEGPSMANLRTSDNCMPLTEAFTPRQDMNIEPVPSTSGLSRSDLGLVSPYDISPVPKKKMKSSNRGRKASVAAVITSSPYKNDLIDKSKKKDEKENKLAKNKNKKQNEKKSKHIKSKGKSKPELDADDEEVMLDTDSEPDALIGYTAPDSEDSECIFCGMLFSNDTHGETWVKCLMCGLWAHYDCAGPEFDTWICDFCK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00965091; iTF_00965074; iTF_00965075; iTF_00965076; iTF_00965077; iTF_00965078; iTF_00965079; iTF_00965080; iTF_00965081; iTF_00965082; iTF_00965083; iTF_00965084; iTF_00965085; iTF_00965086; iTF_00965088; iTF_00965064; iTF_00965071; iTF_00965087; iTF_01264386; iTF_00926532; iTF_00794314; iTF_00406667; iTF_00794315; iTF_00794298; iTF_01073535; iTF_00322344; iTF_00965073; iTF_00144501; iTF_00208795; iTF_01055900; iTF_00736559; iTF_01055901; iTF_00011007; iTF_01359647; iTF_00177041; iTF_00695424;
90% Identity: iTF_00965064;
80% Identity: -