Mdil018929.2
Basic Information
- Insect
- Megalocaria dilatata
- Gene Symbol
- -
- Assembly
- GCA_034642435.1
- Location
- CM067857.1:79716585-79718438[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.7e-09 4.6e-06 27.4 0.0 4 34 15 45 13 51 0.92
Sequence Information
- Coding Sequence
- atGGCCGGCGTGAACTCAAAGCGAAAAGCATGGAATACGGAGCTTATGGCGGAAGCCATAAAATTAGTAAAGGAGAAAAAAATGGGTTATTTAAGAGCTGCAAAACATTTTAATGTGCCAAGATCTACCTTGTTTAGATTATGCCTGAAAAGTGAATTTTCTCCAGAAGAAGCCGCAGCTACTACACTCGGAAGGAAAACTGTCTTAGGGACAACCCTTGAAAATCTTTTAGTAGACTACATTTTGTCGATGGAGAGCAAATTTCATGGCTTGACGAGAAACGATGTTCGAAGAATGGCGTACATGTTAGCTAGACGTAATCAGTTGAAAAATCCATTTGGTGAGACTGGTATGGCTGGCAAAAAATGgcttaaattatttctaaaacgccaTAAGGATAAGCTATCAGTGAGAAGACCAACTGGCACGTCTTTTGCTAGAGCTTTTGGATTCAGCAAGGAAAAAGTAGACTCATTTTTTGATCTCCTCGAAGGCGTCTATGCTCAAGGAAACTATGGTCCAAGTCGTATATACAACGTAGATGAATCTGGGCTTACTGTAGTACAAAGCAAGATACCCCAAGTGATTGGGCATAGAGGAAAACGGCAGATAGCTTCACTTACCTCAGCGGAAAGGGGTTCATTAATGACGATTGTTGCCATGAACGCCACTGGTCATTTTGTGCCTCCCTTTATTATATTCCCACGCAAGAATATGAGTGATCAGCTGATGAGAGGCTGTCCCCCAGGCTCTGTTGGCGTTGCACATCCATCCGGATGGATTCAAATGAACATATTCACTGAATGGTTCAAACATTTCATCAAACATACAAACCCTACTCCGGAATCGAAAGTATTACTTATCTTAGATGGTCATTTTTCTCACACTCGAAACATCGACGTGATAGAGCTTGCTAGGCAAAACAACGTAGAAATTGTCTCCTTACCTCCTCACACAACTCACAAGCTCCAGCCACTAGACAAAACGTTTATGGGACCACTAAAAACGTATTACAGTGAGGAAATACGCATGTGGATTAGAGATAATAATCGACCACTAAGCCCTTATGATGTTGTTGAGTTATTTGGCAGAGCGTATTTAAAAGTGCAAACTGGTGAGATTTCAACAAATGGATTTCGAGTAACTGGCTTATggccattgaataaaaatatattcaccgAGGTCGACTATCTTGCTGCGCAGCAAGATGCAGTTAAAGATGGTAATACGGTCAACGTTCCATCAGGTCACCAACCTGAAGGACCATCGATGGCCAATTTAAGAACATCTGATAACTGTATGCCTTTAACGGAAGCATTCACACCCAGACAAGACATGAATATTGAACCTGTACCCTCAACTTCCGGACTTTCTCGCAGTGATTTAGGATTAGTGTCTCCATATGACATCAGTCCAGTACcaaagaagaaaatgaaatcttctaatAGAGGAAGAAAGGCATCTGTTGCAGCCGTCATTACGTCGTCACCGTACAAGAATGACCTTATAgacaaaagcaaaaaaaaagatgaaaaagaaaataaattggcaaaaaacaagaataaaaaacagaatgagaagaaatcaaaacatataaaatctaaagGGAAGTCTAAGCCTGAGTCAGATGCAGATGATGAGGAGGTGATGCTTGATACAGACAGTGAACCCGATGCTCTGATAGGTTATACAGCTCCAGACTCTGAAGATTCGGAGTGTATTTTCTGTGGCATGCTGTTTTCTAATGATACCCATGGGGAAACATGGGTCAAGTGCCTCATGTGTGGGCTCTGGGCACATTATGATTGCGCTGGACCAGAATTTGATACCTGGATTtgtgatttttgtaaataa
- Protein Sequence
- MAGVNSKRKAWNTELMAEAIKLVKEKKMGYLRAAKHFNVPRSTLFRLCLKSEFSPEEAAATTLGRKTVLGTTLENLLVDYILSMESKFHGLTRNDVRRMAYMLARRNQLKNPFGETGMAGKKWLKLFLKRHKDKLSVRRPTGTSFARAFGFSKEKVDSFFDLLEGVYAQGNYGPSRIYNVDESGLTVVQSKIPQVIGHRGKRQIASLTSAERGSLMTIVAMNATGHFVPPFIIFPRKNMSDQLMRGCPPGSVGVAHPSGWIQMNIFTEWFKHFIKHTNPTPESKVLLILDGHFSHTRNIDVIELARQNNVEIVSLPPHTTHKLQPLDKTFMGPLKTYYSEEIRMWIRDNNRPLSPYDVVELFGRAYLKVQTGEISTNGFRVTGLWPLNKNIFTEVDYLAAQQDAVKDGNTVNVPSGHQPEGPSMANLRTSDNCMPLTEAFTPRQDMNIEPVPSTSGLSRSDLGLVSPYDISPVPKKKMKSSNRGRKASVAAVITSSPYKNDLIDKSKKKDEKENKLAKNKNKKQNEKKSKHIKSKGKSKPESDADDEEVMLDTDSEPDALIGYTAPDSEDSECIFCGMLFSNDTHGETWVKCLMCGLWAHYDCAGPEFDTWICDFCK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00965072;
- 90% Identity
- iTF_00965064;
- 80% Identity
- -