Alep004862.2
Basic Information
- Insect
- Athetis lepigone
- Gene Symbol
- -
- Assembly
- GCA_033675125.1
- Location
- CM066218.1:3952600-3954474[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.4e-11 4.1e-08 33.9 0.0 3 36 16 49 14 54 0.91
Sequence Information
- Coding Sequence
- ATGTCTGGCGTCAATTCAAAAACGAAACGAAAAGACTGGAATGCAGAGGACATGGCGCAAGCTATTAAATTAGTAAGAGAGAAAAAAATGGGTTATTTGAGAGCTGCCAAACACTTTGGTGTGCCGAGATCTACCTTGTTTCGATTATgccaaaaaaaagaattaccGCCAGAAGAAGCCGCAGCTACTACACTTGGGAGGAAAACTGTTTTAGGGACCACCCTTGAAAATCTTTTGGTAGACTACATTTTGACAATGGAGAGCAAGTTCCACGGCTTGACGAGAAGCGATGTTAGAAGAATGGCTTACATGTTGGCAAGACGCAATCAGTTGATAAATCCATTTGGTGACACGGGATTGGCTGGAAAGAAATGGCTTAAGCTATTTCTTAAGCGCCATAAGGAAAAATTATCAGTGAGAAGACCAACTGGCACATCTTTTGCGAGAGCATTTGGATTCAGCAAAGAAAAAGTAGATGCATTCTTTGATCTCCTTGAAGGCGTTTATGCTCAAGAAAACTATGGTCCAAACCGTATATACAATGTCGACGAATCTGGGCTTACCGTAGTACAGAGCAAGATACCCCAAGTGGTTGGGCATAAAGGGAAACGGCAGATAGCTTCACTTACCTCAGCTGAACGGGGTTCATTAATGACAATTGTTGTTGCCATGAACGCCACTGGTCATTTTATACCTCCCTTTATTATATTCCCTCGCAAGAATATGAGTGATCAGCTAATGAGAGGCAGTCCCCCAGGCGCTGTTGGCATTGCACATCCATCAGGATGGATACAAATGAACATATTCACAGACTGGttcaaacattttattaaacataCCAACCCTACTCCGGAATCGAAAGTATTACTGATCTTAGATGGTCATTTTTCTCATACTCGTAACATCGATGTGATAGAGCTTGCTAGAGAACATAATGTAGACATTGTGTCCTTACCTCCGCACACAACCCACAAGCTCCAGCCACTAGACAAAACGTTCATGGGACCTCTCAAATCGTATTACAGTGAAGAAATACGTATGTGGATCAGAGACAATAATAGACCACTAAGCCCATATGATATTGTGGAGCTATTTGGTAGGGCTTATTTAAAAGTACAAACGGGTGAGATAGCAGCCAACGGATTTCGGGTTACAGGGCTATGgccattgaataaaaatatttttaccgcGGTCGACTATCTTGCTGCGCAACAAGATGCAGTTAAAGATGGTTGCACAGTCGACGTTGCACCAATGACATTAAGTCCCCAACCTTTACAAGAATTGATGACTAATCTTAGAACACCTGATGATGGTCAGCCTTTAACTGAAGCTTCTACATCCCGACAAGATTTTATTGAACCTGTGCCCTCAACTTCCGGTATTTCTCGCAGCAGTTTAGGATTGGTTTCTCCATATGACATCAGTCCAGTACCAAACAAGAAAAGGAAACCTTCTAATAGAGGAAGAAAAGCATCTGTTGCAGCAGTCATCACATCTTCACCTTATAAGAACGATCTCATAGAAAAAagtaagaagaaagaagaaaaagaaaataaacaggcaaagaacaaaaataaaaaacagaacgAGAAGAAATCAAAAGGAAAACAGCTAGGAGAAAAGACTAAGTCTAAGTCAGATTCAGATGATGATGAGGAGATGATCTTATTTGATACAGACAGTGAGCCCGATGCCTTAATAGGAAATACAGCCCCAGATTGTGAAGATTCGGAGTGTATTTTCTGTGGCATGCTTTTTTCGAATGACACCCATGGGGAAACTTGGGTCAAGTGCCTCATGTGTGGACTCTGGGCACATATTGATTGCGCAGGACCAGAGTCTGATGCCTGGATTTGTGATTTTTGcaaataa
- Protein Sequence
- MSGVNSKTKRKDWNAEDMAQAIKLVREKKMGYLRAAKHFGVPRSTLFRLCQKKELPPEEAAATTLGRKTVLGTTLENLLVDYILTMESKFHGLTRSDVRRMAYMLARRNQLINPFGDTGLAGKKWLKLFLKRHKEKLSVRRPTGTSFARAFGFSKEKVDAFFDLLEGVYAQENYGPNRIYNVDESGLTVVQSKIPQVVGHKGKRQIASLTSAERGSLMTIVVAMNATGHFIPPFIIFPRKNMSDQLMRGSPPGAVGIAHPSGWIQMNIFTDWFKHFIKHTNPTPESKVLLILDGHFSHTRNIDVIELAREHNVDIVSLPPHTTHKLQPLDKTFMGPLKSYYSEEIRMWIRDNNRPLSPYDIVELFGRAYLKVQTGEIAANGFRVTGLWPLNKNIFTAVDYLAAQQDAVKDGCTVDVAPMTLSPQPLQELMTNLRTPDDGQPLTEASTSRQDFIEPVPSTSGISRSSLGLVSPYDISPVPNKKRKPSNRGRKASVAAVITSSPYKNDLIEKSKKKEEKENKQAKNKNKKQNEKKSKGKQLGEKTKSKSDSDDDEEMILFDTDSEPDALIGNTAPDCEDSECIFCGMLFSNDTHGETWVKCLMCGLWAHIDCAGPESDAWICDFCK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00965072;
- 90% Identity
- iTF_00695424;
- 80% Identity
- -