Mrot000385.1
Basic Information
- Insect
- Megachile rotundata
- Gene Symbol
- JARID2
- Assembly
- GCA_000220905.1
- Location
- NW:1123369-1136741[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.4 7.7e+03 -3.4 0.1 59 82 152 177 141 178 0.56 2 2 6.6e-23 9.4e-20 70.0 0.0 6 89 1371 1452 1367 1452 0.94
Sequence Information
- Coding Sequence
- atggTGTTAAGTCGAAATgataaaagaaagagaaaagaaggAGATTTAGTGGATCTTATGGAACCACTTTCAGAATCTCCAAAGagAACTAAAGTGCATGCACAAAGAAAATTTGCACAAGGAGCAACAAATGTTTTTAACCCTACACATACTCCAATTAAGGATAAAGAGAAAGCTAAACCAGCAGTTATAACTGAATTAATAACACATAAACGACCAAATACAGAAGATTTCTTAACATTTCTATGCTTTAgaggaacATCAATTTTACCtccaagtttaaattttttcaatgttggaaacaagaaagaaaagtCTGAACCTAAACCATTACGTACATCAGTTGATAAGAATGTATGTTCTAGTACTACATCtaatgaaaatcaaaaattagATACAAGTCAAAAAACTGTTACCAGAGTAAAACCTGCTGTTAatgataaaaagaaagtttcaagtacaatacaaaaaaatattagtacaTTTAAAAGTGCTACTTCTACTGTACAAGCACTCAAGAAAAAATATCAGGAACAACGTCTTGCTAAAGAAAggattaaacataaatttaaagcaTCCTGTGTTATGAGAACAAGATCTTGTACAGAAAGGACTAtgctaaaatccacaaatcaaTTAGCCCCCAGAAAGTTTCTTCCAAGAATTGAAACTAAGAGACTTGGTTTAAGGAGCAGTGTACTTGCagacaaaatgaaaaagacTTCTCCAAAAGTTAAATCTGTTCCACCTAAGCCAAAGAAAAAAGTTaccataaaacaaaataacagTGATACATCAAATTCAGACTCTACATCTGAATATGAAGAGGAAGGTCCCTCAGAGAAATCAGTATCACAAATGAAGCGTGCAGTTCAAAagaatgttcaaaaaaatatgtgtACTAGAAGTAAATCTGAAACAAGAAGAATTACTCGATCTCATACTGGGACAATTTCACCAAAAAATCTTAATAAGAGACCAACAAGAAAGACAAAAGAAGCAGCTGCAGTATATATGGAAATTCTTGGCAGGAAACTTGTAAGTCCTGATTTAGAAAATGATGATAATGGATCTATGGATAGTTTTCCAGAATTACCAAATGCACGTAAAAGTGCTCAAACAGAAAATGAAGCTAAAGTTAAAGTAAAACAGCCTGCTTCAAAACCAGTTACTAAAACTAAGGATGGTAAAGTTACTGCTATCCACAGTGTAGCGAAAAAACGATTAGACAAAACTACAGTGAGTAAAATTGCTTTTAAAAGTAAAAGGCTAATAAGGGTTCagaaatattgtgaaatagATAGCGACGAAGATTCAGTAAGTTCTTCTAATGACACtagtaataataacagtaataataacaataatacaagGCCTGTTACAAGACGAAgtttaggaaaattaaataaacccGCAAGTCGATTTCTTCGATCTTCTACGAAAAATGTAGTCACGCGAATTGAGGttcaaaataatgtaaatattaaaccgAAACCTCAAGTTCAAACTAATGTACGATTTAATAAGGATAAATTTGTGATAAAACGCAAAcgagaacaaaattttactaaGTCATTACCTGAGAAAGGTAGTGAAATAAAGCAAAAAGAATCAAAGGTGCAAAGTAATGCAGATGGAACTGCAGATTCTGACGAAGAAACTTTAGGAACAGtgcttaataaaataaagagaaagaaagatgATCATCCACAGACTGAAGAAATTTctagtaataataacaacaacaataattgTGATGTTACAGATAAGGTTGAACAATCTTTGGATGAGAATTCTATAAAGGTGGATCTTTCAAAAGTATCAGATGATGAAGAATCTTTTCGCGGATTTACAAAGAAAACAATATCTAAAGTATTAAACTCTTGTCAAACCCACGTTAATGCTAATCTCCTAGTTGCAGAGAAAACCGAAGATACACCAAAGCCAACTAAAATAGAAGATGAGAAAAATTCAGATCCACctaataaagaagaaaacacCGAATTAATAAGTAATGAATCTTTCTTACACAAAACTTCTGTTGTAGCGAATGTGGCAAATAATCAGTGTACCCAATCTGAAAGAATGCAAAAGACAAAATTGAAGTCATCtaatgaaatagaatttataaaacatattgaAAAAGAATGTCACCATAAACCAGAAATGTCTTCTGGAAATGATGTAGATATATCTTTATCAACATTACATGTAAGGAAAGAAAAAGTGAACATGTCTACTGaacaaattgagaaatggtTAAATGAAAGTTCATTTGCTAAAGAAGAGAGTAAGTTGGAGATGGAAAATGTATCTACTTTTAAATATGATATCTGTGAGAAAAAGGCTGATGTATCGCATTTATCTATTTCAACAAAGATTCAACATTTGGTAAGACCAGTTAATGTTACACTTTCAAAGTTGGCAGAAAAGGCAAACGCAAAAGATCGTATGAGTAtacaaagtaaatttatatctACTACAATAATAGATACGAAATCCAGTGAAATAAAGCAAGAAAATGAACCTACTATTGTGAATAAAAGTAATGTAGATTTGAAAGATGTTAGTAAAGCACgaaatgcaaaattatgtAAAGATTTATGTGCTGGAGAAGAAAGTGATGTTACATTAAAATCTGATCAAACTGTAACAGATGGAACTGGTGAAAAGAAATTGTCAAGTGAGAAGAAGACCATATTTCAGCCAAGAAAACCATTTTTACCAAAAGTTAAAGAACGCAAAACAGTCATTCCTAATGCAAATGCATTTTCTCCAGAAAATGAAAGTAGTGTTTATGCATTTGAAAGTGATACTGAAATTCCAGTTAATACTCCATTTAGACGTAAAATTCGTGAATCGACCAAATCAAATGCAAGTACTCTTTTGTCCGAAAACACTGAACAAAAGTCTGAAATTGATAcaaataaatctgaaaataatacaaataaaactgTAGAAAAGATGATTATGGATAATAGTGAGATATTGGAATCAAAAGAGACCTCCAATAATATCTCTTCACAAAAAGAATGTGAAACagttgaaacaaaaaatacatcaaatactacactgaatataaataaatttgaattacccaaaaattttgcaactttagCTAATATACAAGTACTACCATTGGATAAGTTAACTACAACATGGAGCAATGTAAATTGTAGTGCATCAATTGCTGTGCAAGTAAATCTTGATGATAATGCACAAACACAAGAACAAACAGGAGAAGGAGATTCAAACCAACATAAAAGTACAGAAATATCTACACAAACTGAGAGTAATAACGAAAATGATGATGAAAATGATGGTCAACTATTTTATATACCATTACAAGCAGTTACAAGAAATGGACCAAATTTAGTTCAAGGGCAACAATTAATTCAAGGTGTAGCTGTTAAACTTGGTACTGAAGGACCAAATGGACCTAATCAAAAAGTTCTTTTAAGAGCTAAATTAGTTACAAAACCTCCATCATCTATCGCACGTTGTCCTCCCGTGGGTACTGTTCAACCCACAACTCGTACTCCACCAAATTCTACTTTTGTAACTACAGATCATTCAACACCTTCTACCTCTTCAACTGTTACTTCGGTTATCCCTGCATCTACTTCTGAAATTCAGTCAACTTCTccatgtaaaaatgaaaacataatACAAACTGTAAGCAAACAGAACACTGGAATTTTATCAAGTACaggaacagaaaaattaacaaaatctccaaaaactTCTAGAGAGAGAAAGACTTCCATTGACTCAaacaaaaatggaaaaagATGTCAAATCAAatcaaaacagaaaaatgcTGAAGTTTATTCACCATCtaataatgtaacatttcCAAGTGCAAAAGATCTAAACAGTGAAGCATGTTTAGTTGAAGCTCCAACATTTCATCCTAGTGAAAAAGATTTTCAAGATCCTTTAGAATACATAGATAAAATAAGACCAGTGgcagagaaatttggaatatgcaGAGTTGTACCACCAcctaattttaaaCCGGAATGTAAAGTGTCAGATGACATGAGATTTACTGCTTATAATCAATATGTACATCGCATGCTTCATAGATGGGGACCTAATGTGAAGGAAATGATggctataaaaaaatacttggCCACACAAAGTATAACATTGACTCATCCGCCTTggATTGGTGGCATGGAAGTTGATTTACCTCATTTATATCAGACAGTTCAAAGCTTAGGTGGATTAAAGGAAGtcattgaaaagaaaaagtggCAAAAAGTAGCTGATGGTATGAAGATACCAAAATCTGCCCAAGATCGTGTAACTAAATTAGATgacatttattgtaaatatttattaccgtATGATACATTATCCCCAGAGGAAAGAAGCAAATTATTTGATGAAGTTGAATCTGAATGGATAAAACGAGAAAGTAAAGCTTTGCAGAGACAAAATGCACCAAGTACTGGAGGAGATAATGACGAGGATGAAGAAGATGATAGCTCtgatgaaattgaagaatgcaTTGTAAAGGGTAGAAATATGCCATTAAATGCTTTCTACCGTATCGCACGAAACACACAGCGTATGTGGTTTGGTGAAAATCAACGATCTGGAAATGAAGCTGAAGGTGCTTCTGCTGATGAGGTTGAAAGTGCATTTTGGAAACATGTTGCAGAACGAAAACGgcatgtatgtgtacatgcTGCAAGCATTGATTCAAGTGGTCGCGGTTTTGGATTCTCTGTTGCAAAAAATAGTCCATTTGCAAGACATCCATGGAATCTTAAAGTACTCACTAATAATGCTGGTTCAGTATTGCGAGCTTTAGGTCCAATAATGGgtGTGACAGTACCAACACTTCATGTAGGAATGTTATTCAGTGCATGCTGTTGGTATCGTGATCCCCACGGTCTTCCCTGGATAGAATATTTACACACTGGTGCCAAAAAGATTTGGTATGGTATACCAGATGAACATAACAACAATTTCAGAGAAGCTCTTTCAAAAATGGTACCACgatactgtaaaaataaaactatatgGTTACCATCAGACACAGCAATGGTTCCTCCTGAATTGTTAGTTAGTAATGGAGTATCATTGTGTCATACTGTACAAGAACCAggacaatttataattgtatttccTAAAGCATTTACATCAAGCATATGTACTGGTTATGTGGTTTCTGAAAGTGTTTACTTTGCACAACTATCGTGGCTAGAAACTGCGGAACAAgtatttaaagACATACAAGATAGTTGTGAACCATCAATTTTCTCGTTCGAAAGATTATTATTCAACATTATTAATGATTCTAGATCTCATATAGAAGTGTTAAAACAGattttgccaagtgtaattaaaattcgtgAGAAAGAAATAAGTTCTCGAAAACAGTTAGTATCGGTGGGTCTTTTAAATACAGAAAGATTACCTCTGCCAGATAGTGGTAAacgaaaaaaagggaaaaaagtgaaagaagATGATGGTGATTTTGAATGTGAAGTTTGTAGAGCTAATCTATTTGTTTCGTTGGTTAGCAATTCCCAAGATGACAGTATTTACTGTTTGCCACACgcattgcaattatttaacaagAAAAAACAAACTTTAAAACATTGTACTTTAATGTATACGTATAATGAGGATGAATTGGATGAGTTAATTCATAAGCTGGAAGAAAGAATTGAAGCCAAATCTAAAAAGACTAATCAAATCAAACAGACAAAGTAA
- Protein Sequence
- MVLSRNDKRKRKEGDLVDLMEPLSESPKRTKVHAQRKFAQGATNVFNPTHTPIKDKEKAKPAVITELITHKRPNTEDFLTFLCFRGTSILPPSLNFFNVGNKKEKSEPKPLRTSVDKNVCSSTTSNENQKLDTSQKTVTRVKPAVNDKKKVSSTIQKNISTFKSATSTVQALKKKYQEQRLAKERIKHKFKASCVMRTRSCTERTMLKSTNQLAPRKFLPRIETKRLGLRSSVLADKMKKTSPKVKSVPPKPKKKVTIKQNNSDTSNSDSTSEYEEEGPSEKSVSQMKRAVQKNVQKNMCTRSKSETRRITRSHTGTISPKNLNKRPTRKTKEAAAVYMEILGRKLVSPDLENDDNGSMDSFPELPNARKSAQTENEAKVKVKQPASKPVTKTKDGKVTAIHSVAKKRLDKTTVSKIAFKSKRLIRVQKYCEIDSDEDSVSSSNDTSNNNSNNNNNTRPVTRRSLGKLNKPASRFLRSSTKNVVTRIEVQNNVNIKPKPQVQTNVRFNKDKFVIKRKREQNFTKSLPEKGSEIKQKESKVQSNADGTADSDEETLGTVLNKIKRKKDDHPQTEEISSNNNNNNNCDVTDKVEQSLDENSIKVDLSKVSDDEESFRGFTKKTISKVLNSCQTHVNANLLVAEKTEDTPKPTKIEDEKNSDPPNKEENTELISNESFLHKTSVVANVANNQCTQSERMQKTKLKSSNEIEFIKHIEKECHHKPEMSSGNDVDISLSTLHVRKEKVNMSTEQIEKWLNESSFAKEESKLEMENVSTFKYDICEKKADVSHLSISTKIQHLVRPVNVTLSKLAEKANAKDRMSIQSKFISTTIIDTKSSEIKQENEPTIVNKSNVDLKDVSKARNAKLCKDLCAGEESDVTLKSDQTVTDGTGEKKLSSEKKTIFQPRKPFLPKVKERKTVIPNANAFSPENESSVYAFESDTEIPVNTPFRRKIRESTKSNASTLLSENTEQKSEIDTNKSENNTNKTVEKMIMDNSEILESKETSNNISSQKECETVETKNTSNTTLNINKFELPKNFATLANIQVLPLDKLTTTWSNVNCSASIAVQVNLDDNAQTQEQTGEGDSNQHKSTEISTQTESNNENDDENDGQLFYIPLQAVTRNGPNLVQGQQLIQGVAVKLGTEGPNGPNQKVLLRAKLVTKPPSSIARCPPVGTVQPTTRTPPNSTFVTTDHSTPSTSSTVTSVIPASTSEIQSTSPCKNENIIQTVSKQNTGILSSTGTEKLTKSPKTSRERKTSIDSNKNGKRCQIKSKQKNAEVYSPSNNVTFPSAKDLNSEACLVEAPTFHPSEKDFQDPLEYIDKIRPVAEKFGICRVVPPPNFKPECKVSDDMRFTAYNQYVHRMLHRWGPNVKEMMAIKKYLATQSITLTHPPWIGGMEVDLPHLYQTVQSLGGLKEVIEKKKWQKVADGMKIPKSAQDRVTKLDDIYCKYLLPYDTLSPEERSKLFDEVESEWIKRESKALQRQNAPSTGGDNDEDEEDDSSDEIEECIVKGRNMPLNAFYRIARNTQRMWFGENQRSGNEAEGASADEVESAFWKHVAERKRHVCVHAASIDSSGRGFGFSVAKNSPFARHPWNLKVLTNNAGSVLRALGPIMGVTVPTLHVGMLFSACCWYRDPHGLPWIEYLHTGAKKIWYGIPDEHNNNFREALSKMVPRYCKNKTIWLPSDTAMVPPELLVSNGVSLCHTVQEPGQFIIVFPKAFTSSICTGYVVSESVYFAQLSWLETAEQVFKDIQDSCEPSIFSFERLLFNIINDSRSHIEVLKQILPSVIKIREKEISSRKQLVSVGLLNTERLPLPDSGKRKKGKKVKEDDGDFECEVCRANLFVSLVSNSQDDSIYCLPHALQLFNKKKQTLKHCTLMYTYNEDELDELIHKLEERIEAKSKKTNQIKQTK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01424161;
- 90% Identity
- iTF_00962292;
- 80% Identity
- -