Mrot002908.1
Basic Information
- Insect
- Megachile rotundata
- Gene Symbol
- retn
- Assembly
- GCA_000220905.1
- Location
- NW:541006-625024[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.7e-26 8.1e-23 79.8 0.0 2 89 236 321 235 321 0.96
Sequence Information
- Coding Sequence
- ATGGAGATGAGCGACGAGTACCAAGACATGGGAAATCCTGGTGGAGGGGTCACGGTGGCCAATATACCCATGGCTCATCACCAACACACGCCCGACAGTCCATTGTCGCATCAGGAGGAGGATTTGTCGGATCCAGACCTGCAGGACGAGGAGAGCGGAGAAGAGTTACCTCAGCAACCACTTCAGGGTAACACGCACTCCTCGTCGGATAATGCATCCGTGCCGACTGGTACACCTACTCCATTAACACACTTGAACAGTCTGATGGGCACCCACCATCCACATTTTCTGGCTAAACTGAAAATGGAGCAAACCGAAGTGGACGCGTTGAACAACAAAAGTGGACTGGAAGCGCTTCAAGCCGCGATGGGTAGCGGTGGCTTCAATTTGCCGTTTTCGTTTCCGCCACCGGCAGCGTTTCTAACGCCtcaacaacaacaacattCGCAAAACAGTCACTCGCAGCCAGTAGCGACAACCGGAGTCGGAAGCGGTATACTAGGAAGTCAGATAACGTCCTCGGCTAGCTCGCATTCCAGCGAATCGTCGCAAGGCAGCGCCAGGAACGGTGGCGAGCCACGAGAGGGTAGTAGTCTTTCGCAGAACAACGCGACAGGAACGAATCATCAGCAACAGACCAGCTGGAGTTTCGAAGAGCAGTTCAAACAGGTGCGTCAGCTGTACGAGATCAACGACGACCCGAAGCGGAAAGAGTTCCTCGACGACCTGTTCAGTTACATGCAAAAACGAGGGACACCGATCAATCGGCTACCGATCATGGCGAAGTCGGTGCTGGATCTGTACGAGCTGTACAACTTGGTGATCGCTAGGGGCGGCCTAGTCGACGTAATCAACAAGAAACTGTGGCAGGAAATCATCAAAGGCCTCCACCTGCCATCGAGCATCACTTCCGCCGCGTTCACTCTGCGCACCCAGTACATGAAATACCTGTATCCATACGAGTGCGAGAAGAAACGGCTGTCGACACCGACGGAATTACAGGCGGCGATCGACGGAAATCGACGAGAAGGACGACGAAGCAGTTACGGAGCGTACGCGGGCGGTGGCGGCGCGGCAGGTGAGAGCCTGGTGCAAAGGAATCCCCACACGCCGAACTCGCTCGCGTTGCACGCCCAAATGTCTCCGTTGTCGTTAGTGACGGCGGTGGCAGCCGGTGGTCAACATCACGGGCCACAATCTCTGGTGAACGGAAGCGCCGCGCACACGCCGTTACCCCACCATCCGCACCACCCGCAACACCCGCAAGGATCGCTTGGACAGCCACCAAACGCCGGACCTATTCCCGGAATGGCGCCGTCCGAATTTGAAGCACGGATGGTCGAGTACGTAAAGTTGTTGAATAAGGAGCTAAGAAGCGCCGGGGCTGGCACACCACCGCCGATGATCCATCGACAAGGAAGCGCCTCGCCACCGTCCTCCACTCCACCCAGAGACGCGGGTTTCAGTGCCCTAGAAATGTCTAGACTGACCCTATGGAACATGTACAATAATAACACTTTGTATCCGGGTGTTGGTCACCAACCACCGTTGTCTCCTCAAGCCTCGCATTCGCCGGTACCTCCAGCTTCCAGTCCAGAACCTCAAAGAGAAGCTCTCGATCTCGGTCTCAGGTCCTCGCCGGTGTCTTCGTCGCCTGCCAGACAAAGCTCGCCTTCGTCGGGTGGTAGCGTGCAGGTGAAAAGAGATCCGGAAATGATCGGTACTCCTGGACCACCGCCAGCTAAACGATTACTTTCGGATGACGACAGCCCTATGGAAAAGAACGCCACCGCCTCTATAGGCACGCACATTAAAATCTCTAATCGAGGGGACGGAAGAAACGGTGACAATTCCCTAGTAGTCAGTATGGAGTTGAACGGAGTGATGTACCAAGGTGTTCTTTTCGCCCAAAGCGATACCAGGACTACGGCCAGTACAGCGACAACTAATAACAATAGCAACAGCAATAATCACAGTAAAGCGTCGCGAAGCATGGTCTCGTGA
- Protein Sequence
- MEMSDEYQDMGNPGGGVTVANIPMAHHQHTPDSPLSHQEEDLSDPDLQDEESGEELPQQPLQGNTHSSSDNASVPTGTPTPLTHLNSLMGTHHPHFLAKLKMEQTEVDALNNKSGLEALQAAMGSGGFNLPFSFPPPAAFLTPQQQQHSQNSHSQPVATTGVGSGILGSQITSSASSHSSESSQGSARNGGEPREGSSLSQNNATGTNHQQQTSWSFEEQFKQVRQLYEINDDPKRKEFLDDLFSYMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKRLSTPTELQAAIDGNRREGRRSSYGAYAGGGGAAGESLVQRNPHTPNSLALHAQMSPLSLVTAVAAGGQHHGPQSLVNGSAAHTPLPHHPHHPQHPQGSLGQPPNAGPIPGMAPSEFEARMVEYVKLLNKELRSAGAGTPPPMIHRQGSASPPSSTPPRDAGFSALEMSRLTLWNMYNNNTLYPGVGHQPPLSPQASHSPVPPASSPEPQREALDLGLRSSPVSSSPARQSSPSSGGSVQVKRDPEMIGTPGPPPAKRLLSDDDSPMEKNATASIGTHIKISNRGDGRNGDNSLVVSMELNGVMYQGVLFAQSDTRTTASTATTNNNSNSNNHSKASRSMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00360694;
- 90% Identity
- iTF_00625289;
- 80% Identity
- -