Dnoa004356.1
Basic Information
- Insect
- Dufourea novaeangliae
- Gene Symbol
- retn
- Assembly
- GCA_001272555.1
- Location
- NW:2808265-2971143[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.9 6.2e+03 -3.2 0.1 67 82 202 218 191 219 0.69 2 2 4.7e-26 7.5e-23 79.9 0.0 2 89 225 310 224 310 0.96
Sequence Information
- Coding Sequence
- ATGGAAATGAGCGACGAGTATCAAGACATGGGGAACCCTGGCGGAGGGGTGGCGATGGCGAACATGCCAATTGCCCATCATCGTCACACGCCCGACAGTCCAATGTCGCATCAGGAGGAGGATTTGTCGGATCCAGACCTCCAAGACGAGGAGAGCGGCGAGGAGTTACCTCAGCAGCCGCTCCAGGGTAACACGCACACCACGGACAATGGATCCATGCCGGTCAGCACACCTACTCCATTAACACACTTGAACAGCCTGATGAGCACGCACCATCCGCACTTTCTGGCCAAGCTGAAAATGGAGAGCGACGTGGACGCGTTGAACAACAAAAGCGGCCTGGAAGCTCTTCAGGCGGCCATGGGCGGGACCGGGTTCAATCTTCCGTTCACGTTTCCGCCGCCAGCGGCGTTCCTGACCCCGCAGCACCACTCCCAGAACAATCATCCGCAGTCGGGCAATATCGGGGGCGGTCTTGGCAATCAGATGACATCTTCCGCGAGCTCGCATTCCAGCGAATCGTCGCAAGGCAGCGCGAGAAACGGCGGCGAACCGCGGGAGAGCAACAATCATTCGCAGAACAACACGACGGGAACGAATCATCAGCAGCAGACCAGCTGGAGTTTCGAAGAGCAGTTCAAACAGCTCTACGAGATCAACGACGACCCGAAAAGGAAGGAGTTTCTGGACGACCTTTTCAGCTATATGCAGAAACGAGGCACACCGATCAATCGGCTGCCGATCATGGCGAAATCGGTTCTGGATCTATACGAGCTGTACAATCTGGTGATCGCCCGAGGCGGGCTGGTCGACGTAATTAACAAGAAGCTCTGGCAGGAAATCATCAAAGGCCTCCACCTGCCATCGAGCATCACTTCCGCCGCGTTCACTCTACGCACCCAGTACATGAAATACCTGTATCCGTACGAGTGCGAGAAACGACGGCTGTCAACGCCCGCCGAGCTCCAGGCGGCGATCGACGGTAATCGCAGGGAGGGACGTCGCAGCAGCTACGGGGCGTACGCGGGCGGCGGCGGGGCTGGCGAGAGTCTGGTGCAACGGAGCCCGCACACGCCGAGCTCGTTAGCGTTGCACGCGCAAATGTCGCCGTTGTCGTTGGTCACCGCGGTTGCTGCCAGTGGTCAGCACCATGGACCCCAGTCGTTGGTGAACGGAAGCGCCGCGCACACCCCTTTGACACACCATCCGCACCATCCGCAACACCCTCAGGGACCGCTGGGACAGCCACCGAATGCCGGACCGATCCCGGGAATGGCGCCGTCCGAATTCGAGGCACGAATGGTGGAGTATGTGAAGCTGCTGAACAAGGAGTTAAGGAGCGCGGGAGCGGGCACGCCGCCGCCGATGATCCATCGGCAAGGTAGCGCGTCGCCGCCGTCCTCGACGCCGCCGAGGGACGCAGCGTTCAGCGCCCTCGAGATGTCACGACTCACCCTATGGAACATGTACAACAACAACACACTTTATCCAGGCGTTGGTCACCAGCCACCATTATCGCCGCAGACCTCGCACTCGCCGGTACCTCCAGCGTCCAGCCCAGAACCGCAAAGGGAAGCCCTCGATCTTGGACTCAGGTCATCGCCGGTATCTTCGTCGCCAGCGAGACAAAGTTCACCCTCTTCAGGCGGTAGCGTGCAAGTGAAGAGGGATCCAGACATAATCGGCACCCCTGGTCCTCCACCGGCGAAAAGGTTACTTTCCGACGACGACAGTCCAATCGAGAAAAACGCTTCGGCCTCCATAGGCACGCACATTAAAATCTCCAATCGAGGAGACGGCAGGAACGGCGACAATTCCCTGGTGGTCAGTATGGAGCTGAACGGGGTGATGTACCAAGGTGTTCTGTTCGCCCAGACGGACAGCAGGACCGCGAGCAGCACATCGGCGAACAACAACACCGCGAAAGCGTCCCGGAGCGTGGTCTCGTGA
- Protein Sequence
- MEMSDEYQDMGNPGGGVAMANMPIAHHRHTPDSPMSHQEEDLSDPDLQDEESGEELPQQPLQGNTHTTDNGSMPVSTPTPLTHLNSLMSTHHPHFLAKLKMESDVDALNNKSGLEALQAAMGGTGFNLPFTFPPPAAFLTPQHHSQNNHPQSGNIGGGLGNQMTSSASSHSSESSQGSARNGGEPRESNNHSQNNTTGTNHQQQTSWSFEEQFKQLYEINDDPKRKEFLDDLFSYMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRRLSTPAELQAAIDGNRREGRRSSYGAYAGGGGAGESLVQRSPHTPSSLALHAQMSPLSLVTAVAASGQHHGPQSLVNGSAAHTPLTHHPHHPQHPQGPLGQPPNAGPIPGMAPSEFEARMVEYVKLLNKELRSAGAGTPPPMIHRQGSASPPSSTPPRDAAFSALEMSRLTLWNMYNNNTLYPGVGHQPPLSPQTSHSPVPPASSPEPQREALDLGLRSSPVSSSPARQSSPSSGGSVQVKRDPDIIGTPGPPPAKRLLSDDDSPIEKNASASIGTHIKISNRGDGRNGDNSLVVSMELNGVMYQGVLFAQTDSRTASSTSANNNTAKASRSVVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00360694;
- 90% Identity
- iTF_00360694; iTF_00683955; iTF_00760777; iTF_00963652; iTF_01070840;
- 80% Identity
- -