Mlig013702.1
Basic Information
- Insect
- Megachile ligniseca
- Gene Symbol
- LZTR1
- Assembly
- GCA_945859565.1
- Location
- CAMAOB010000095.1:1024689-1027958[+]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.5e-14 4.5e-12 46.5 0.8 2 108 351 494 350 496 0.88 2 4 5.1 1.5e+03 -0.3 0.0 77 107 495 525 493 528 0.86 3 4 2.9e-19 8.8e-17 61.6 0.0 8 96 587 675 581 691 0.85 4 4 1.1 3.3e+02 1.8 0.1 76 100 689 713 684 722 0.80
Sequence Information
- Coding Sequence
- ATGGATAATGTTGCAACTGCAGAGTGTTTGACTCTTGATTTCGGACCTTTTGAAACGGTTCATCGCTGGCAGCGTCTGCCAGAATGCGACGAATTTGTTGGCGACAGGCGTAGCAAACACACTATTGTAGCATACAAAGATGCGATATATGTTTTTGGTGGTGATAATGGTAAAAGAATGTTGAATGATTTGTTACGATTTGATGTGAAAGAAAAGTCCTGGGGACGTGCATTTGCAACAGGAGCAGCTCCTGCTCCACGCTATCATCATTCAGCAGTTGTGCATGATTCTTCTATGTTTGTATTTGGTGGTTATACTGGTGACATACATTCCAATTCAAATCTCACCAATAAGAATGACTTATTTGAATATCGATTTCATACTGCCCAGTGGACAGAATGGAAATTTATCGGGAAAACTCCAGTTGCTAGATCTGCACATGGAGCTGCTGTATATGACAATAAGTTATGGATATTTGCAGGGTATGATGGAAATGCTAGGCTAAATGATATGTGGACAATATCATTATTACCTGGAGAACCCAGGGTATGGGAGGAAGTTGCACAGTCTGGTGACTGTCCACCAACATGTTGCAATTTTCCTGTTGCCGTAGCACGTGAATCGATGTTTGTATTTAGCGGTCAGAGTGGAGCAAAGATCACCAATAGTCTCTTTCAGTTTCATTTTCGAGAGAAACGGTGGACGCGAATTTCAACCGAACATATTCTCCGGGGTGCACCGCCACCACCAGCGCGTCGATACGGTCACACCATGGTCAGTTTTGATAGACATCTGTATGTATTTGGCGGTGCTGCCGATTCTACCTTGACTAATGATCTGCACTGCTATGATCTTGATACTCACACGTGGAATATCATTTTACCATCAGCTGACAGTCAGGTTCCATCTGGTCGATTGTTCCATGCGGCAGCCGTAATTGGAGAGGCAATGTTTATTTTTGGCGGAACAGTCGACAATAATGTTCGATCTGGAGAAACATATCGATTTCAATTTTCATCCTACCCAAAATGCACTTTGCATGATGATTTCGGAAGGTTATTAAACAGTCGCCTTTTTTGCGACGTCGAATTTGTGGTAGGCGATTCGGAAACAAAAATACCAGCTCATATAGTAATGGTAGCAGCTCGTTCTCAGTTTCTTAGAGCTCTTATCAGGCAAGAGCGAGAGAAACGAGATAAACATTTGGAGGAAGTGTTTGGTACTGTAGATGTACCGATCAAAGATTTGCCGTTATTAGAGGTAAGACTAACAGACGCTGTACCGGAAGCTTTCGAAATGGTATTAAATTACATATACACTGATCGAATCGATCCAACGAAACGAAGCCCAGATGGTTCGAGTAAAAGCGTCGAAGACCCATTGAGTAATCGAATCGTGCTTCTTATGATGGATGTGTATCGCTTAGCTCTACAATTCAATATGAAACAATTGGAACAGCTATGTGTTCAATATTTGAAAGCAACCATCAGTCATGCCAACGTATTAGAAGCATTACACAATGCTGCTCATTTGAAACTGTATTTCATAAAAGAGTTTTGTTTAAGTTTCGTGGTCAGAGAGAGTAATTACAATCAGATTGTCATGAGCAAAGAATTTGAGACCTTGGATCAACCTTTGATGGTTGAAATTATTAGAAAAAGACAGATGCCTTCGAGTGGAGCTTTTCCTAGAAAATGTGACCTTAGCACAGGCACAACTTTGGAACAAGATATGGAGGCATTTTTGAAAAGAGTAGGTCGGCAATTCTGTGATATAACCTTAATGTTAGATGGCGTACCaattccagcgcacaaagcgatccttgcagcacgctgcagttatttcgaaggaatgttccgttcgttcaTGCCAGAAAATAATATAGTCAATATACAAATCGGTGAAATGATTCCATCTTCTGAGTCGTTCGATTCTTTGCTAAGGTACATTTACTACGCAGACGTTTCGATGCCTCCCGAGGACTCTTTATATTTGTTCACCGCGCCAGGGTTCTATGGGTTCACGAATAATCGATTGCAAGCATTTTGTAAACAAAATCTTGAAATGAACGTTACATTTGAAAACGTGATACAAATCTTAGAAGCTGCAGATAGAATGCAAGCTGCTGACATGAAGAAGTATGCCTTGAATCTCATTGTACACCATTTTACGAAGGTTGCAAGGCTTCCTAGACTGAAACAATTAAGTCGAGAACTTTTGTTGGAAATTTTGGAAGCATTGGCAGATGAACGTAGCGAGGCAAGAACATGTCAAGATATGACAAACGATTGCTGA
- Protein Sequence
- MDNVATAECLTLDFGPFETVHRWQRLPECDEFVGDRRSKHTIVAYKDAIYVFGGDNGKRMLNDLLRFDVKEKSWGRAFATGAAPAPRYHHSAVVHDSSMFVFGGYTGDIHSNSNLTNKNDLFEYRFHTAQWTEWKFIGKTPVARSAHGAAVYDNKLWIFAGYDGNARLNDMWTISLLPGEPRVWEEVAQSGDCPPTCCNFPVAVARESMFVFSGQSGAKITNSLFQFHFREKRWTRISTEHILRGAPPPPARRYGHTMVSFDRHLYVFGGAADSTLTNDLHCYDLDTHTWNIILPSADSQVPSGRLFHAAAVIGEAMFIFGGTVDNNVRSGETYRFQFSSYPKCTLHDDFGRLLNSRLFCDVEFVVGDSETKIPAHIVMVAARSQFLRALIRQEREKRDKHLEEVFGTVDVPIKDLPLLEVRLTDAVPEAFEMVLNYIYTDRIDPTKRSPDGSSKSVEDPLSNRIVLLMMDVYRLALQFNMKQLEQLCVQYLKATISHANVLEALHNAAHLKLYFIKEFCLSFVVRESNYNQIVMSKEFETLDQPLMVEIIRKRQMPSSGAFPRKCDLSTGTTLEQDMEAFLKRVGRQFCDITLMLDGVPIPAHKAILAARCSYFEGMFRSFMPENNIVNIQIGEMIPSSESFDSLLRYIYYADVSMPPEDSLYLFTAPGFYGFTNNRLQAFCKQNLEMNVTFENVIQILEAADRMQAADMKKYALNLIVHHFTKVARLPRLKQLSRELLLEILEALADERSEARTCQDMTNDC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00087267;
- 90% Identity
- iTF_00216471;
- 80% Identity
- -