Basic Information

Insect: Mechanitis messenoides
Gene Symbol: -
Assembly: GCA_959347415.1
Location: OY365772.1:11084557-11091921[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0083 0.77 11.0 3.1 1 23 289 311 289 311 0.98

2 12 1.6e-05 0.0014 19.6 0.5 2 23 319 340 318 340 0.94

3 12 0.24 23 6.4 1.3 1 23 344 366 344 366 0.96

4 12 0.00069 0.064 14.4 2.0 1 23 371 394 371 394 0.98

5 12 0.007 0.65 11.2 0.1 1 23 398 421 398 421 0.95

6 12 0.0072 0.67 11.2 0.1 2 21 437 456 437 461 0.92

7 12 8.1e-05 0.0075 17.3 0.6 3 23 471 492 471 492 0.98

8 12 0.11 10 7.5 0.2 3 23 513 534 512 534 0.96

9 12 6.2e-06 0.00058 20.8 0.5 1 23 545 567 545 567 0.98

10 12 7.8e-06 0.00073 20.5 2.5 1 23 573 595 573 595 0.99

11 12 0.0024 0.22 12.7 1.3 1 23 601 623 601 623 0.98

12 12 1.4e-05 0.0013 19.7 0.6 1 23 629 652 629 652 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0083	0.77	11.0	3.1	1	23	289	311	289	311	0.98
2	12	1.6e-05	0.0014	19.6	0.5	2	23	319	340	318	340	0.94
3	12	0.24	23	6.4	1.3	1	23	344	366	344	366	0.96
4	12	0.00069	0.064	14.4	2.0	1	23	371	394	371	394	0.98
5	12	0.007	0.65	11.2	0.1	1	23	398	421	398	421	0.95
6	12	0.0072	0.67	11.2	0.1	2	21	437	456	437	461	0.92
7	12	8.1e-05	0.0075	17.3	0.6	3	23	471	492	471	492	0.98
8	12	0.11	10	7.5	0.2	3	23	513	534	512	534	0.96
9	12	6.2e-06	0.00058	20.8	0.5	1	23	545	567	545	567	0.98
10	12	7.8e-06	0.00073	20.5	2.5	1	23	573	595	573	595	0.99
11	12	0.0024	0.22	12.7	1.3	1	23	601	623	601	623	0.98
12	12	1.4e-05	0.0013	19.7	0.6	1	23	629	652	629	652	0.98

Sequence Information

Coding Sequence: aTGGAAGAGCTTAAAGTATGTAGAATATGTCTTGTGATGAATGTAAAGATGCACGATCTGGGTTCTTACCCTTTGGATATCTGTTATGAGAGTTTAATCGGTAGTAATGTACTGAAATTGGTGCAAATAAGGGGTTATGCATGTTATATGTGTGCACCTCTATTAAAGAAGTTTCACGTGTTCAAGGAGAAGTGCCTGCAAGGACAGTCTACATTATATGGCTTGATGAACTCTTTCGGAAATATAACTGGTGATAGTATAagtcaaataaacaaacaaaacctCTCTTCTACTAATTTATCAAGtttcaatatatacaacattGATATTGACTCCAATGAAGGGAAAGGTGAATTGAAAAGAGAACCAGCTGATATTGTTCAAGTCAGATTATATTATGAAGACAGTGAGAGTCTGAAGCAAGAACTAGTTCAAGATAGAACATTTGATGATATTGAAGGTATTAAGCAAGAAGAAGATAGCTATGATTTTGGTGTAGTATCTAGTGATGATGATGAACCATTATCTGTACATAAAGAGAAGAAAGAAGAGAATGTCAAAAAGAGAAGAAGTAAGAAGATTGATACAGCTCAATCTGATGAAGTGGAAGCAACCAATACAAGTACAGTTCTCCaagaattatatgatataatcaCAACAAAAAAACGGGGAAGACCCAAAAAGGGGGAAATTAGACAAAAGGAtacaaaaaagacaaaaccCCGTCGAACTGCCAACACTGGTGGGGTACTTGACGATGGACTGGACATTGAAGATTActgtactattattaaattgactgaaGAAGAACAAAAAGAAGAAGTGAATCAACGTCAGCAATCTCTCAACTATATGAATGCAGTGTACAAATGTAGTCTATGCTATAAAGGTTTCATAGACACGCATGCTTGGAAGCATCACGTAGCTAAACATGACCCGagtGCAGGAGACATCGAATGTCCAGTTTGTAAGATCAGATTCAAAACCAAACGCAACTTACAAAAGCATGCTGCAAATCATGGGAAGAAATTTGCTTGTAAATCTTGTTCATATGTTTCTAAAACCACGACTCAAGCCAAACAACACCAACAATGGCATAAGGGTGTCACATATAAATGCCAACACTGCGATGAAGTTTCTACtaagtGGACGTCATACCTGAGTCATGTGCGCATCAAGCACCCGTCCCAGTACATCTGTGGCGCCTGTGGGTACTCGTTCGTGAGCCGGCTGGGACTCAACATGCATCGCACCATGATGCACAAAGACCTAGTCGATAATGAAACAGAGGACAACAAAGATGCGCCGTACTGCGAGGAGTGTGACGTGAAGTTCATCAGCGTGGAGGCCTACAAGAGACACATGGTCACCTCCGTCAAACACACGCAAAGCACCGACTTTGGCACGGGGTGTCGCGAGTGCGGTGAAACTTTCCCGGACGCTGAGGCTCTCCGCGTGCATCACCGGCGAAAGCACTCGCGACAGAGACCGAAGAACTACGGGAAGAAACCTTCCCGACTCGCCTGGCCGGCGCCCTGCGAACATTGCTCAGAAGTAATTCCAAATGCAAGAGAGTATTGGTCTCACTTCCGACGCGTCCATCCAGACAAGACATATCCTACACAGAAGAATTTCGTTTGTGATATATGTGGCAAGAGTTTTCGGggCAACGCGTTCCTAGTTTATCATAAGCGTACTCACACATCTGAACGCACGTACAAATGTGGTCAATGTCCAAAAGCCTTCCACAACAGAAATAACCTGCAGATGCATGAACGGACTCATTCTGATGCTCGGCCGTACCCCTGCGCGCTGTGTGACAAGGCCTTCAAGTGCAAGGGCGCACTCGACAGACATTTTAGAAGTCACAGTGGTGAGAAGCCCTACATGTGTCAGGTGTGCGGCAAGTCGTTCGCTCAGTCCAACAGCCGCAAGCTGCACGTCCGCACGGTGCACCTCAAGCAGCCCTCCCCCTACGTGTCGCGAGCGAGACTGGAGCGACGAGCTCGAGCCATCAAAGAGCACGCGCCCGCAGCGCACTACCTATACTGA
Protein Sequence: MEELKVCRICLVMNVKMHDLGSYPLDICYESLIGSNVLKLVQIRGYACYMCAPLLKKFHVFKEKCLQGQSTLYGLMNSFGNITGDSISQINKQNLSSTNLSSFNIYNIDIDSNEGKGELKREPADIVQVRLYYEDSESLKQELVQDRTFDDIEGIKQEEDSYDFGVVSSDDDEPLSVHKEKKEENVKKRRSKKIDTAQSDEVEATNTSTVLQELYDIITTKKRGRPKKGEIRQKDTKKTKPRRTANTGGVLDDGLDIEDYCTIIKLTEEEQKEEVNQRQQSLNYMNAVYKCSLCYKGFIDTHAWKHHVAKHDPSAGDIECPVCKIRFKTKRNLQKHAANHGKKFACKSCSYVSKTTTQAKQHQQWHKGVTYKCQHCDEVSTKWTSYLSHVRIKHPSQYICGACGYSFVSRLGLNMHRTMMHKDLVDNETEDNKDAPYCEECDVKFISVEAYKRHMVTSVKHTQSTDFGTGCRECGETFPDAEALRVHHRRKHSRQRPKNYGKKPSRLAWPAPCEHCSEVIPNAREYWSHFRRVHPDKTYPTQKNFVCDICGKSFRGNAFLVYHKRTHTSERTYKCGQCPKAFHNRNNLQMHERTHSDARPYPCALCDKAFKCKGALDRHFRSHSGEKPYMCQVCGKSFAQSNSRKLHVRTVHLKQPSPYVSRARLERRARAIKEHAPAAHYLY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00461775;
90% Identity: iTF_00959591; iTF_00461775; iTF_01033952; iTF_01034853;
80% Identity: -