Basic Information

Insect: Mechanitis mazaeus
Gene Symbol: -
Assembly: GCA_959347395.1
Location: OY365754.1:10730090-10737141[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0082 0.73 11.0 3.1 1 23 286 308 286 308 0.98

2 12 1.5e-05 0.0014 19.6 0.5 2 23 316 337 315 337 0.94

3 12 0.24 21 6.4 1.3 1 23 341 363 341 363 0.96

4 12 0.00069 0.061 14.4 2.0 1 23 368 391 368 391 0.98

5 12 0.0069 0.61 11.2 0.1 1 23 395 418 395 418 0.95

6 12 0.0072 0.63 11.2 0.1 2 21 434 453 434 458 0.92

7 12 8.1e-05 0.0071 17.3 0.6 3 23 468 489 468 489 0.98

8 12 0.11 9.6 7.5 0.2 3 23 510 531 509 531 0.96

9 12 6.2e-06 0.00055 20.8 0.5 1 23 542 564 542 564 0.98

10 12 7.8e-06 0.00069 20.5 2.5 1 23 570 592 570 592 0.99

11 12 0.0024 0.21 12.7 1.3 1 23 598 620 598 620 0.98

12 12 1.4e-05 0.0012 19.7 0.6 1 23 626 649 626 649 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0082	0.73	11.0	3.1	1	23	286	308	286	308	0.98
2	12	1.5e-05	0.0014	19.6	0.5	2	23	316	337	315	337	0.94
3	12	0.24	21	6.4	1.3	1	23	341	363	341	363	0.96
4	12	0.00069	0.061	14.4	2.0	1	23	368	391	368	391	0.98
5	12	0.0069	0.61	11.2	0.1	1	23	395	418	395	418	0.95
6	12	0.0072	0.63	11.2	0.1	2	21	434	453	434	458	0.92
7	12	8.1e-05	0.0071	17.3	0.6	3	23	468	489	468	489	0.98
8	12	0.11	9.6	7.5	0.2	3	23	510	531	509	531	0.96
9	12	6.2e-06	0.00055	20.8	0.5	1	23	542	564	542	564	0.98
10	12	7.8e-06	0.00069	20.5	2.5	1	23	570	592	570	592	0.99
11	12	0.0024	0.21	12.7	1.3	1	23	598	620	598	620	0.98
12	12	1.4e-05	0.0012	19.7	0.6	1	23	626	649	626	649	0.98

Sequence Information

Coding Sequence: aTGGAAGAGCTTAAAGTATGTAGAATATGTCTTGTGATGGATGTAAAGATGCACGATCTGGGTTCTTACCCTTTGGATATCTGTTATGAGAGTTTAATCGGCAGTAATGTACTGAAATTGGTGCAATTAAGGGGTTATGCATGTTATATGTGTGCACCTCTATTAAAGAAGTTTCACATGTTCAAGGAGAAGTGCCTGCAAGGACAATCTACATTATATGGCTTGATGAACTCTTTCGGAAATATAACCGGTGATAGTATAagtcaaataaacaaacaaaacctCTCTTCTACTAATTTATCAAGTttcaatatatacaacattGATATTGACTCCAATGAAGGGAAAGGTGAATTGAAAAGAGAACCAGCTGATATTGTTCAAGTCAGATTATATTATGAAGACAGTGAGAGTCTGAAGCAAGAACTAGTTCAAGATAGAACATTTGATGATATTGAAGGTATTAAGCAAGAAGAAGATAGCTATGATTTTGGTGTAATATCTAGTGATGATGATGAACCATTATCTGTACATAAAGAGAAGAAAGAAGAGAATGTCAAAAAGAGAAGAAGTAAGACAGCTCAATCTGATGAAGTGGAAGCAACCAATGCAAGTACAGTTCTCCaagaattatatgatataatcaCAACAAAAAAACGGGGAAGACCCAAAAAGGGGGAAATTAGACAAAAGGAtacaaaaaagacaaaaccCCGTCGGACTGCCAACACTGGTGGGGTACTTGATGATGGACTGGACATTGAAGATTACTgcactataattaaattgactgaaGAAGAACAAAAAGAAGAAGTGAATCAACGTCAGCAATCTCTCAACTATATGAATGCAGTGTACAAATGTAGTCTATGCTATAAAGGTTTCATAGACACGCATGCTTGGAAGCATCACGTAGCTAAACATGACCCGAGTGCAGGAGACATCGAATGTCCAGTTTGTAAGATCAGATTCAAAACCAAACGCAACTTACAAAAACATGCCGCAAATCATGGGAAGAAATTTGCTTGTAAATCTTGTTCATATGTTTCTAAAACCACgACTCAAGCCAAACAACACCAACAATGGCATAAGGGTGTCACATATAAATGCCAACACTGCGATGAAGTTTCTACtaagtGGACGTCATACCTGAGTCATGTGCGCATCAAGCACCCGTCCCAGTACATCTGTGGCGCCTGTGGGTACTCGTTCGTGAGCCGGCTGGGACTCAACATGCATCGCACCATGATGCACAAAGACCTAGTCGATAATGAAACAGAGGACAACAAAGATGCGCCGTACTGCGAGGAGTGTGACGTGAAGTTCATCAGCGTGGAGGCCTACAAGAGACACATGGTCACCTCCGTCAAACACACGCAAAGCACCGACTTTGGCACGGGGTGTCGCGAGTGCGGTGAAACTTTCCCGGACGCAGAGGCTCTCCGCGTGCATCACCGGCGAAAGCACTCGCGACAGAGACCGAAGAACTACGGGAAGAAACCTTCCCGACTCGCCTGGCCGGCGCCCTGCGAACATTGCTCAGAAGTAATTCCAAATGCAAGAGAGTATTGGTCTCACTTCCGACGCGTCCATCCAGACAAGACATATCCTACACAGAAGAATTTCGTTTGTGATATATGTGGCAAGAGTTTTCGGggCAACGCGTTCCTAGTTTATCATAAGCGTACTCACACATCTGAACGCACGTACAAATGTGGTCAATGTCCAAAAGCCTTCCACAACAGAAATAACCTGCAGATGCATGAACGGACTCATTCTGATGCTCGGCCGTACCCCTGCGCGCTCTGTGACAAGGCCTTCAAGTGCAAGGGCGCACTCGACAGACATTTTAGAAGTCACAGTGGTGAGAAGCCCTACATGTGTCAGGTGTGCGGCAAGTCGTTCGCTCAGTCCAACAGCCGCAAGCTGCACGTCCGCACGGTGCACCTCAAGCAGCCCTCCCCCTACGTGTCGCGAGCGAGACTGGAGCGACGAGCTCGAGCCATCAAAGAGCACGCGCCCGCAGCGCACTACCTATACTGA
Protein Sequence: MEELKVCRICLVMDVKMHDLGSYPLDICYESLIGSNVLKLVQLRGYACYMCAPLLKKFHMFKEKCLQGQSTLYGLMNSFGNITGDSISQINKQNLSSTNLSSFNIYNIDIDSNEGKGELKREPADIVQVRLYYEDSESLKQELVQDRTFDDIEGIKQEEDSYDFGVISSDDDEPLSVHKEKKEENVKKRRSKTAQSDEVEATNASTVLQELYDIITTKKRGRPKKGEIRQKDTKKTKPRRTANTGGVLDDGLDIEDYCTIIKLTEEEQKEEVNQRQQSLNYMNAVYKCSLCYKGFIDTHAWKHHVAKHDPSAGDIECPVCKIRFKTKRNLQKHAANHGKKFACKSCSYVSKTTTQAKQHQQWHKGVTYKCQHCDEVSTKWTSYLSHVRIKHPSQYICGACGYSFVSRLGLNMHRTMMHKDLVDNETEDNKDAPYCEECDVKFISVEAYKRHMVTSVKHTQSTDFGTGCRECGETFPDAEALRVHHRRKHSRQRPKNYGKKPSRLAWPAPCEHCSEVIPNAREYWSHFRRVHPDKTYPTQKNFVCDICGKSFRGNAFLVYHKRTHTSERTYKCGQCPKAFHNRNNLQMHERTHSDARPYPCALCDKAFKCKGALDRHFRSHSGEKPYMCQVCGKSFAQSNSRKLHVRTVHLKQPSPYVSRARLERRARAIKEHAPAAHYLY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00461775;
90% Identity: iTF_00960347;
80% Identity: -