Mmes005932.1
Basic Information
- Insect
- Mechanitis messenoides
- Gene Symbol
- Paxbp1
- Assembly
- GCA_959347415.1
- Location
- OY365761.1:11507695-11516583[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-14 1.1e-10 42.2 0.7 17 190 507 655 500 664 0.72
Sequence Information
- Coding Sequence
- ATGTCCATGTTTCGTAAACCAAAAAAGATCCAGAGACGAGTGTTTTGTGCAGACGACGATGAGGACGGCGAGCCAGAGCCTCCGTTGCCGCCTCCACCGCCTATTATTAGTAACAACAGGAAGGAAAATAAACCAATCAAAACTACAACGCTTTTAAGTTTTGTCGATGAAGAGGAAGAAGGTGAGGTATTCAAGGTTAAGAAGTCATCTCAAAGCAAGAGGTTAAGTAAACGCAGAGAGAAGGAGAAACGTCGTGTGCCAGAtggtgataataataaatatgccaATCATATTGATGAGGAAAAACCAGAGGCAAAAGAAGAACCAAAAAAGAAGGTATCGCTGGAGGGGCTCATCCTGTGCGGGCGGGAGGCGCTGTCCGCGGAGGCGGGGGGGGACATGTCCTCGGACAGTGAAGAGGATAACAGGGGGTTCCACACGTACCGCGCGGAGAGCGTGCGGGCGGCGCTGGCGGGCGCGGGGGGGCGCATCCCCGACGCCGCGCTCATACACGCCGCGCGCAAGACGCGACAGCAGGCGCGCGAGTTAGGCGACTTTGTGCCGATACAGTCGGATTCCGGTCAGCGGATGATGAGAGATGATGACGTTGATGACGACGATGATGATGAAGAAGAGGGCAGGATACAGGTCAGAGGACTGGAGCTGCCCAGTGATAAACCTCAACGTGGTACCGCAGCAGCGGCTTCAGATGAGGAAATGAATAGCGCAGGAGAGGAGTGGGAAGAGCAACAGATTAAAAAAGCCATGCCTTGCATTGCTGATATCACAGGTGACATGGTCCCCGTGAACCCGTTCTCGCTGCCCCCCCCTGCGGCCACTCCCCGCCACCTGCGCGCGCTCGCCGACAGTGCGCCTAACAGTGCCGCCGACCTCGTGCGAGCGCTCAGGGAGAGGCTGTCGGAGGTGCAAGCGAGTCGCGCGAGCACGGCTAGTCGTCGAGCTCAGCTGGTGGAGCGCGCGCTGGTGGCTTCACGAGTGAGGGACTCCCGAGAGGCGCGCCGCGGGGACCTGGACCACAAGTACAGGAGGGCGCAGGCCGCCAGGGGGTACATCACCGACCTTATCGAGTGCCTGGATGAGAagATGCCGCAGTTGGAAGCTCTGGAGGCTCGCGCTTTGGCGTTACACCGTCGCCGCCGCGACCTGCTCGTGGAGAGACGACGAGCTGACGTCAGAGACCAGGCGCAGGACGTACTCGCTCTCGCCGCCCGTGCAGGTGCATCAAAGCCGGTGGATAATGAAGAAAAACGGCAACGTACAGCAGAGCGCGAGGGACGACGACGCGCCCGGAGACTAAAGCGCGAGGCGGCCGGGAACAACGCACACAGGGACGGGGACTCCAGCGACGACGAACTGCCGCCGGCACTGGCGCACCACTGTGCTCAGGAGGCCGAGGCGATCCGCTCGCTGTCGTCTCAGCTGTTCGCAGACGCGCTGTGGGCGTACCGCGGCGTGCGCGGAGTGTGCGCGCGAGTCGCTCGTCTGCGCCGCGCGCGCGACCTCTACACGGACGCCTACGTGGCGCAGTGTCTGCCGCGCCTACTGGCGCCATACGTCAGGCACCAGttaattcttTGGAATCCACTAGCAGATGAAGACAACGATGACTACGAGAAAATGGACTGGTACAAATGTCTGATAATGTACGGCTGTAAGAACGAGAAGTTGTCGAGTGATTCAGAACAATCTTCAGAGGAGGAGGTTGTACTTACGGAGACCTCGGTGCGTGACGATCCCGACCTCATGCTGGTGCCAACCATCATTGACAAGGTCGTGGTCCCCAAGGTCACTGAGCTGGTGGAGCACGCGTGGGATCCTATGAGCGTGCGTGCATGCGTTCGCGTGCGTCAGCTGCTGCTGCGGGCGAGTGACCTGCCGGCGCACTCCTCGCTAGCTCGCTTCGCAGCTGCCGTGCGCACAGGACTCGCTGCCGCACTGCATGCTGACGTGTTCTTGCCGACGCTGCCGCCACACATAGTGGAGGGTCCAGGCGGTCCGTTCTGGCGTCGCTGCCTGGGCGCGGGCGTGCGTCTGCTGCGCGCTGTGCTGTGTGTGTGCGCGCCGCCGCACGCACTCGCCGCTGACGCGCTGGCGCTGGCGCTCGTGGAGACGCTGTGCTGTGCTGCGGGCGCAGCCCCCGGCGCGTGCAGTGCggcggcggccagcgcgcTCGCCGACACGCTGCCGCGTGCCGGACCCGTGCGGGCGCCAGCGCTGGCGAGACTGGCCGCACTCGCCACGCTGGCGCTGTCCAGACTGCACTCTGACAACCCGCTGCATTtGAAAGCATTAGAACAAGCTAGAGGTGTGATAGCAGAAGCTCGAGCCGCTGAATGA
- Protein Sequence
- MSMFRKPKKIQRRVFCADDDEDGEPEPPLPPPPPIISNNRKENKPIKTTTLLSFVDEEEEGEVFKVKKSSQSKRLSKRREKEKRRVPDGDNNKYANHIDEEKPEAKEEPKKKVSLEGLILCGREALSAEAGGDMSSDSEEDNRGFHTYRAESVRAALAGAGGRIPDAALIHAARKTRQQARELGDFVPIQSDSGQRMMRDDDVDDDDDDEEEGRIQVRGLELPSDKPQRGTAAAASDEEMNSAGEEWEEQQIKKAMPCIADITGDMVPVNPFSLPPPAATPRHLRALADSAPNSAADLVRALRERLSEVQASRASTASRRAQLVERALVASRVRDSREARRGDLDHKYRRAQAARGYITDLIECLDEKMPQLEALEARALALHRRRRDLLVERRRADVRDQAQDVLALAARAGASKPVDNEEKRQRTAEREGRRRARRLKREAAGNNAHRDGDSSDDELPPALAHHCAQEAEAIRSLSSQLFADALWAYRGVRGVCARVARLRRARDLYTDAYVAQCLPRLLAPYVRHQLILWNPLADEDNDDYEKMDWYKCLIMYGCKNEKLSSDSEQSSEEEVVLTETSVRDDPDLMLVPTIIDKVVVPKVTELVEHAWDPMSVRACVRVRQLLLRASDLPAHSSLARFAAAVRTGLAAALHADVFLPTLPPHIVEGPGGPFWRRCLGAGVRLLRAVLCVCAPPHALAADALALALVETLCCAAGAAPGACSAAAASALADTLPRAGPVRAPALARLAALATLALSRLHSDNPLHLKALEQARGVIAEARAAE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00842694; iTF_01034605; iTF_01033752; iTF_00959420; iTF_00461577; iTF_00958679;
- 90% Identity
- iTF_00461577;
- 80% Identity
- -