Dlor011735.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Dircenna loreta
Gene Symbol
Paxbp1
Assembly
GCA_963555665.1
Location
OY743093.1:8996362-9003755[-]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.1e-16 5.8e-12 46.4 0.8 19 190 508 654 500 663 0.81

Sequence Information

Coding Sequence
ATGTCTATGTTTCGTAAACCAAAGAAGATACAGAGACGAGTGTTTTGTGCAGACGACGATGAGGACGGCGAGCCAGAGCCGCCGTTGCCGCCTCCGCCGCCAATTATTAGTAACAACAGGACGGAAAATAAACCAGTCAAAACTACGACCCTTTTAAGTTTTGCTGATGAAGAGGAAGAAGGTGAGGTATTTAAGGTAAAGAAGTCATCACAAAGCAAGAGGTTAAGCAAACGCAGAGAGAAGGAGAAACGCCGTGTACCAGATGGTGATAATAATAGATATGCAAATCATATTGATGAGGAAAAACCAGAAGAGAAAGAAGAACCAAGAAAGAAGGTATCATTGGAGGGGCTGATCCTGTGCGGGCGAGAAGCTCTGTCTGCAGAGGCGGGGGGGGACATATCCGATGACAGCGAAGAGGATAACAGGGGGTTCCACACGTACCGCGCGGAGAGCGTGCGGGCGGCGCTGGCGGGCGCGGGGGGGCGCATCCCCGACGCCGCGCTCATACACGCCGCGCGCAAGACGCGACAGCAGGCCCGAGAGTTGGGGGACTTTGTGCCGATACAGTCAGATTCCGGCTCGCGAATGATGAGAGATGATGACGGTGATGACGACGATGATGATGAAGAGGGCAGGATACAGGTCAGAGGATTGGAGCTGCCCAGTGATAAGCCTCAACGCGGTACCGCAGCGGCGCCTTCAGACGAGGAAATCAATAGTGACGGAGAGGAGTGGGAAGAGCAACAGATAAAGAAAGCCATGCCTTCCATAGTCGATATCACagGCGACCTGGTCCCCGTGAACCCGTTCTCGCTGCCCCCCCCTGCGCCCGCGCCGAGACACCTGCGCGCGCTCGCCCACGCCGCGCCCACCAGCGCCCACGACCTCGTGCACGCGCTCCGGGACAGGCTGTCGGAGGTGCAGGCGAGCCGCGCCAGCACGGCGCTGCGGCGGGCGCGGCTGGTGGAGCGCGCGCTGGCCGCCTCGCGCGTGCGCGAcgcccgcgccgcccgccGCGGGGACCTCGACCACAAGTACAGGCGGGCGCAGGCCGCCCGGGGGTACCTCACGGACCTCGTCGAGTGCCTGGACGAGAAGATGCCGCAGCTGGAAGCGTTAGAGGCGCGCGCGCTGGCGCTGCACCGGCGCCGCCGCGACCTGCTCGTGGAGAGACGACGAGCCGACGTACGGGACCAGGCTCAGGACGTGCTCGCACTGGCCGCCCGTGCGGGTTCGTCAAAGCCGGTAGATAATGAAGAAAAACGACAACGCACGGCGGAGCGCGAGGGACGACGGCGCGCACGGCGACTGAGGCGCGAAGCGGCCGGCAACAACGCTCATAGGGACGGGGACTCCAGCGACGACGAATTACCGCCGGCGCTAGCACACCACTGTGCACAGGAGGCCGAGGCGATCCGCTCGATGTCGTCGCAGCTGTTTGCGGACGCGCTGTGGGCGTACCGTGGCGTGCGCGGAGTGTGCGCGCGCGTGGCTCGTCTGCGGCGTGCGCGGGCGCTCTACACCGACGCGTACGTGGCGCAGTGTCTGCCGCGCCTCCTGGCGCCCTACGTCAGGCACCAGtTAATACTTTGGAATCCACTAGCAGATGAAGAAAACGATGACTACGAAAAAATGGACTGGTACAAATGTCTGATGATGTACGGCTGTAAGAACGAGAAGCTGTCCAGTGACTCGGAACAGTCTTCAGATGAGGAGGTCGTTCTGACGGAGACCACAGTTCGTGAGGACCCCGACCTCATGCTGGTCCCAACTATCATTGACAAGGTCGTGCTTCCCAAAGTCACTGAGCTGATAGAGCACGCGTGGGACCCGATGAGCGTCCGCGCGTGCGTGCGCGTGCGCCAGCTGCTGCTGCGAGCGAGCGAGCTGCCGGCGCACGCGTCGCTGGCGCGGCTGGCGGCCGCCGTGCGCTCCGGGCTGGCCGCCGCGCTGCACGCCGACGTGTTCCTGCCGACGCTGCCGCCGCACATAGTGGAGGGTCCGGGCGGTCCGTTCTGGCGACGCTGCCTGGGCGCCGGCGTGCGTCTGCTGCGCGCCGTGCTGTGCGTGTGCGCGCCGCCGCCGGCACTCGCCGCCGACGCCCTGGCGCTGGCGCTCGTCGAGACGCTGTGCTGCGCGGCGGGCGCGGCGCCGGCGGCGTGcagcgcggcggcggcgggcgcgCTGGCGGACACGCTGCCGCGCGCGGGCCCGCTGCGTGCGCCCGCGCTCGCTCGCCTCGCCGCACTCGCCACGCTGGCGCTGTCGCGACTGCACTCGGACAACCCGCTGCATTTGAAAGCATTAGAACAAGCTAGAAGTGTGATAGCGGAAGCGCGAGCCGCCGAGTGA
Protein Sequence
MSMFRKPKKIQRRVFCADDDEDGEPEPPLPPPPPIISNNRTENKPVKTTTLLSFADEEEEGEVFKVKKSSQSKRLSKRREKEKRRVPDGDNNRYANHIDEEKPEEKEEPRKKVSLEGLILCGREALSAEAGGDISDDSEEDNRGFHTYRAESVRAALAGAGGRIPDAALIHAARKTRQQARELGDFVPIQSDSGSRMMRDDDGDDDDDDEEGRIQVRGLELPSDKPQRGTAAAPSDEEINSDGEEWEEQQIKKAMPSIVDITGDLVPVNPFSLPPPAPAPRHLRALAHAAPTSAHDLVHALRDRLSEVQASRASTALRRARLVERALAASRVRDARAARRGDLDHKYRRAQAARGYLTDLVECLDEKMPQLEALEARALALHRRRRDLLVERRRADVRDQAQDVLALAARAGSSKPVDNEEKRQRTAEREGRRRARRLRREAAGNNAHRDGDSSDDELPPALAHHCAQEAEAIRSMSSQLFADALWAYRGVRGVCARVARLRRARALYTDAYVAQCLPRLLAPYVRHQLILWNPLADEENDDYEKMDWYKCLMMYGCKNEKLSSDSEQSSDEEVVLTETTVREDPDLMLVPTIIDKVVLPKVTELIEHAWDPMSVRACVRVRQLLLRASELPAHASLARLAAAVRSGLAAALHADVFLPTLPPHIVEGPGGPFWRRCLGAGVRLLRAVLCVCAPPPALAADALALALVETLCCAAGAAPAACSAAAAGALADTLPRAGPLRAPALARLAALATLALSRLHSDNPLHLKALEQARSVIAEARAAE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00960181;
90% Identity
iTF_00960181; iTF_01034605; iTF_01033752; iTF_00959420;
80% Identity
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