Basic Information

Insect: Mechanitis lysimnia
Gene Symbol: -
Assembly: GCA_036026155.1
Location: JAYRBX010000051.1:3938560-3942717[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.011 1.6 10.7 0.9 3 23 42 63 41 63 0.92

2 23 0.23 35 6.6 0.3 1 22 438 459 438 459 0.95

3 23 4.5 6.9e+02 2.5 0.3 1 22 500 521 500 523 0.82

4 23 0.073 11 8.1 0.8 1 20 532 551 532 553 0.81

5 23 1.7 2.6e+02 3.8 0.1 3 23 562 583 560 583 0.89

6 23 0.0096 1.5 10.9 0.1 3 23 603 624 601 624 0.94

7 23 0.069 11 8.2 6.3 1 23 630 653 630 653 0.95

8 23 0.084 13 7.9 0.0 1 23 679 702 679 702 0.90

9 23 0.013 1.9 10.5 3.4 1 23 707 729 707 729 0.97

10 23 0.00052 0.08 14.9 0.1 1 23 735 758 735 758 0.96

11 23 5e-05 0.0076 18.1 1.3 1 23 770 792 770 792 0.98

12 23 0.00097 0.15 14.0 4.0 1 23 835 858 835 858 0.96

13 23 0.0098 1.5 10.9 3.4 1 23 908 931 908 931 0.96

14 23 0.00074 0.11 14.4 2.1 2 23 956 978 955 978 0.95

15 23 0.058 8.9 8.4 0.1 2 23 984 1006 983 1006 0.93

16 23 0.0066 1 11.4 0.2 1 21 1050 1070 1050 1071 0.95

17 23 0.00031 0.047 15.6 0.6 1 23 1081 1103 1081 1103 0.94

18 23 5.7e-05 0.0087 17.9 0.4 2 23 1193 1215 1192 1215 0.93

19 23 1.2e-07 1.8e-05 26.3 1.1 3 23 1222 1242 1221 1242 0.98

20 23 0.0054 0.82 11.7 1.1 1 23 1259 1281 1259 1282 0.95

21 23 0.2 30 6.7 0.0 1 23 1303 1325 1303 1325 0.97

22 23 0.018 2.8 10.0 0.6 1 23 1331 1354 1331 1354 0.95

23 23 0.00017 0.026 16.4 0.4 1 23 1362 1385 1362 1385 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.011	1.6	10.7	0.9	3	23	42	63	41	63	0.92
2	23	0.23	35	6.6	0.3	1	22	438	459	438	459	0.95
3	23	4.5	6.9e+02	2.5	0.3	1	22	500	521	500	523	0.82
4	23	0.073	11	8.1	0.8	1	20	532	551	532	553	0.81
5	23	1.7	2.6e+02	3.8	0.1	3	23	562	583	560	583	0.89
6	23	0.0096	1.5	10.9	0.1	3	23	603	624	601	624	0.94
7	23	0.069	11	8.2	6.3	1	23	630	653	630	653	0.95
8	23	0.084	13	7.9	0.0	1	23	679	702	679	702	0.90
9	23	0.013	1.9	10.5	3.4	1	23	707	729	707	729	0.97
10	23	0.00052	0.08	14.9	0.1	1	23	735	758	735	758	0.96
11	23	5e-05	0.0076	18.1	1.3	1	23	770	792	770	792	0.98
12	23	0.00097	0.15	14.0	4.0	1	23	835	858	835	858	0.96
13	23	0.0098	1.5	10.9	3.4	1	23	908	931	908	931	0.96
14	23	0.00074	0.11	14.4	2.1	2	23	956	978	955	978	0.95
15	23	0.058	8.9	8.4	0.1	2	23	984	1006	983	1006	0.93
16	23	0.0066	1	11.4	0.2	1	21	1050	1070	1050	1071	0.95
17	23	0.00031	0.047	15.6	0.6	1	23	1081	1103	1081	1103	0.94
18	23	5.7e-05	0.0087	17.9	0.4	2	23	1193	1215	1192	1215	0.93
19	23	1.2e-07	1.8e-05	26.3	1.1	3	23	1222	1242	1221	1242	0.98
20	23	0.0054	0.82	11.7	1.1	1	23	1259	1281	1259	1282	0.95
21	23	0.2	30	6.7	0.0	1	23	1303	1325	1303	1325	0.97
22	23	0.018	2.8	10.0	0.6	1	23	1331	1354	1331	1354	0.95
23	23	0.00017	0.026	16.4	0.4	1	23	1362	1385	1362	1385	0.96

Sequence Information

Coding Sequence: ATGGAGCAACAACAACAGTTCTCCAATGTTCCGAGTATGCCAGAAGTTTCAATAACAGTCATGAGGCCGACTGGTGAGACTCTTCACGCTCGTCAAGGCATTCAAGAAATCGCCTCCAAGGATTGTCTCGTTTGCGGTCGATCCTACAGATACTCTCATAATGCCCGAAGGCATGAACTGAATGCACATAGTTTTGATAGGTACACCAATAAAATAACTACTAAAAAATCACAGTCACACATGCAACCAAAATTTAGACCAAATCCATTTAATCCTAAAGCCCGTTTAATGCCAAATCCGATTAGCCACAAAATGCAGTTTCATTCAAAATCGATGCCAGGGAGAATTATGCCACAGAGAATTGTTGCTCCACCTAAACCAATTCCGATTAAAACATCTAAAGCTGCGCAAAATAATTTGCCTTACCCTCTTCGTATAAAAGCGTTAaaagatttacaaataaaaaaaaaggaacctCAAATTTTGAAGACATTGCTGACATCTAAGCCTGAAGTTTTGGTATCTGAGCCTGAGATTATTAATTCTGGGCCAGAGAGTCCTGAGACATTAATTTCCGAACCCGAAATAGCATCATTCCAAGTGGAGACGATTCTATCAGAGCCGGATGGGTTTGTTAATCAACAAGAGGATGAGGAAGCAGACAATGACAACCAAGGACAACATTATGATACTGTTGATATGGAATCTGATAACGAAATTGAGATTGCCCGACAGAACGAAAATGATGTGGATATTGACGAAAATCCTTTAATTGATACTGATGAGAACCAACAGGACGAGGAGAACAATATGGAGGAAGCTCAAGATGAAAATGACGGAGATGATCATGAGGATAATGAGGATAGACAggatgatttaattaataacgaGGACGGGGAGGGTGATGATAATGCCAAAGAAAGTCAAGATGATGATGCCGAgaaaataaattaccaaaatataaagaatgaaGACAATGAAGAAGATGAAGAAATGCCAGCGTTAAACATAGCGCCAGTTGTTGAAATAAATGAggatatacaaacaaactcGTATAACAGTGATGCTAATGAGGAAGAAGAAGCAGACGAAACAGTAGATCCCAACGACACAGTCGATGGTGATGAAGCAGAAAAAGACCTGGACCCAGATAAAGTATACATCACTAAAACACAacgagattttattttaaaataccgtGATATTATTCAACAAATTAATACTAAGCGGTGCCTTTGTTGTAATAAAGAACATCCACGAAGAAAAGCAGTTATTCAACATTTACAGAAAAATGGTCACAAGGTTCCAAAACATACTTGCTACAATTGTGTTGTGACTTTCGGACACATCGGCGCCTTGTTGAGCCACATGAGGTCTAACACCTGCACGGATCTAtggaaaatcatttataatgaaaatggtATAACCGATGATATAGTATTGGAAGATAAACCTGACAACAAAATTCCGTATAAGGATGTCGTCAATGCCAGGTCATACGCCTGTAAATTGTGTCCAGCTAAGTTTCAGCTTAAGCAGTTTATAATGAAGCACGTCTTAGATGTCCACGAAGATGGTCAATCACGCGTTCCCTTTTCTTGCGTCCATTGTGGAATGCGTTTTAAAGACAAAAGTATTGGAAAAAGACACATTCGCAATGGAGATTGCACCGTGTATATCGCTTGTGAATTATGTTCTGAGAAGTTTATGAATATGCAAGATTTCAATGATCATGCAGTTTCTGTACACGCTGGCAATCTGGATCCGGAAAATCAGACTAAATGTGTCGATGGTAGACCAACTGATTGTCCAATTTGCGGCAAGAAGAACAGTAGTTATCCaaatttagtaaaacatttaaaagctGTACACAATGAAGAAAAGCCTCATCATTGCCAACATTGCGACTCTAAATTTGAACAAACTACTGATCTTAACAAGCATATCTATATGGAACATTCGGATAGAAGCTTGGGTATGCAATCTATTGAGCCTGACATGTCAATTGTAAAAGAAGAGGCTGAAGAATACCACTATTCCTGTACAGAATGCAATGCTATCTTTGAAACTGTAGATGCGTGGACAGATCACCAAGTAGCTGAACATAATCAGGTCGCTCATCATTGCGATCAATGTGAAAAGAAATTTCTACGTCCATCGGAACTTGCAGAACATAAGAATACTCACCTAAGAGTAAAATTTTATCCTTGTGGCGTTTGTCCAAATTCTTATAGCACTCCCCAGAAGCTAACGGAACATATGCAACAAATGCATCCTGGGGCTACCACACGTGGGGGTGATAGCGACTTCTATTGCGATATATGTGTAAGATCTTTCAAGAGTCGTCAAGCCTACTCGAACCACATGCGCATTCACTCTAGGGTGCCTACTACTAACAGGAAACCAGGAGAATCTAAAGGATTTGCTCCTCAAATAGTAGGTAAACCCATAAAACAATTCTCGATGCAACCAGGATTCAGCCCATTTGTCCCAAATGCACCATACTGTTGTGATATTTGCGGTAAAGGATTCATGCATAAGAAAAACATATGGAAACATAAGAAAGTACTGCACGCTGACCTTCTTAATGATAGAAATGACAGCGAAGAAAATACTATGCATGCCTCTACTGAAGAAGATGAATATAATGTTGACGAAAATGGTGCAATCTTGTCAACCCCACAGTTTAACAGTTTCAATTTTACTAATGATGCTTTGCCATATTCGTGTGAAATATGCTATAAACGATTTCCTCTAAGGACATGTTTATGGAAACACAAACGCGCTAAGCACGGTATTTCCAAGCCGAACGCTGGTAGTTCTTCAGAAACTCAAACTCAAACATCATCCTCGGAGGGAAGATCGAGTTGCACGATATGTAAAATTACGTTTTCCGATAAGAAGTCATATTATCGCCACCGAAAAAATGTACACAAGTCGACTGTACAGATGTGCAAAATATGTGGAAAACCTTTGAATTCTACTTTAGAACTATACGAGCATCTCAAAGCTGCACATGCGCGTGAATTACTCGGGTACAATGCCAATCAAGGCCCCGGCAAGTCTCAAGACGCCGGCCAAGATATGGACGTGGAATATGACGAAGACCAAGACTCGGCCGATCCGAGCGTAGACTACCAGGCTCGATACCCCTGCGACACATGTGGCAAGCAATTTGTGGGGCTACTAGCTTTGCAAAATCATCAGTGTATAAATCAGATTCAATCACAGCCGCAGACATTCGAATGTGAAATATGTCACAAGAGTTACACGTCAATCGCCGCGCTGAAGAGCCACCGTGGATGGCATCTGCGATCCCCCGACGGAAAAGCCGCCGCCAACAATACCGGGCTTTGGATGCCACAGAACAAGGTCACGACCAAAGTGAGCAAACACGAAGTCGTAGATCCCGTTCAACTCGCGCGCGTTCAACACACGACACCGGCCAGCATCGCCAAGAGGAGGCTTCCACCGGAAGTGGAAATAACCGTCGTTAATCCCAACAAAAAACTGCGGTCGGACGACTCCATCGATCTAGATCATCAGAACAACTCCTCCGGGGGACCAGAAGATAAATATTGCAACATCTGCGACAAGGAATTCACAAAGCGAGCGGCCTACCAGCGCCACATGGACGAGGTGCACCAGCCTAACTCCGTCTTCTGTCCCGTCTGCGACAAGAGTTTTACGCGGAAATCTACACTAATCGTGCACATGAAGAAGCATTACGAGAGCGGCGAGGGAACCTCGGGCTCCCAGATGGACGATGACTCGCACACCTGCGACGTCTGCGGCAGCGTATTCGACGGCGCGAAGGCCCTGATGTCCCACAAGAACATGCACCACGGGGAGGAGGAGTCCGACCAGTCGGATTCGGAGAGCGCGCCTCCCGCCCCGCCCGGGGAGTTCACGTGCGCGCAGTGTGGTGACGGAGTGGCGACCCCCCGCGACCTTCTGGCTCACCGCGCCATGCACGCTGCGCCCACCAAGTTCTTCTGCAACATCTGCAAAGTGTACTTCGCGCGCGCGCTCGACCTCTCCTCTCACACGCGCGCGCGACACGCAGACAACGACAAGGTGTTCTTCCCCTGCGCCATGTGCGACCGCTTCTATATGAACAAGAAGAGCCTGCAGCGGCACATCGAGATGGCGCACTGA
Protein Sequence: MEQQQQFSNVPSMPEVSITVMRPTGETLHARQGIQEIASKDCLVCGRSYRYSHNARRHELNAHSFDRYTNKITTKKSQSHMQPKFRPNPFNPKARLMPNPISHKMQFHSKSMPGRIMPQRIVAPPKPIPIKTSKAAQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEIINSGPESPETLISEPEIASFQVETILSEPDGFVNQQEDEEADNDNQGQHYDTVDMESDNEIEIARQNENDVDIDENPLIDTDENQQDEENNMEEAQDENDGDDHEDNEDRQDDLINNEDGEGDDNAKESQDDDAEKINYQNIKNEDNEEDEEMPALNIAPVVEINEDIQTNSYNSDANEEEEADETVDPNDTVDGDEAEKDLDPDKVYITKTQRDFILKYRDIIQQINTKRCLCCNKEHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFGHIGALLSHMRSNTCTDLWKIIYNENGITDDIVLEDKPDNKIPYKDVVNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSRVPFSCVHCGMRFKDKSIGKRHIRNGDCTVYIACELCSEKFMNMQDFNDHAVSVHAGNLDPENQTKCVDGRPTDCPICGKKNSSYPNLVKHLKAVHNEEKPHHCQHCDSKFEQTTDLNKHIYMEHSDRSLGMQSIEPDMSIVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCGVCPNSYSTPQKLTEHMQQMHPGATTRGGDSDFYCDICVRSFKSRQAYSNHMRIHSRVPTTNRKPGESKGFAPQIVGKPIKQFSMQPGFSPFVPNAPYCCDICGKGFMHKKNIWKHKKVLHADLLNDRNDSEENTMHASTEEDEYNVDENGAILSTPQFNSFNFTNDALPYSCEICYKRFPLRTCLWKHKRAKHGISKPNAGSSSETQTQTSSSEGRSSCTICKITFSDKKSYYRHRKNVHKSTVQMCKICGKPLNSTLELYEHLKAAHARELLGYNANQGPGKSQDAGQDMDVEYDEDQDSADPSVDYQARYPCDTCGKQFVGLLALQNHQCINQIQSQPQTFECEICHKSYTSIAALKSHRGWHLRSPDGKAAANNTGLWMPQNKVTTKVSKHEVVDPVQLARVQHTTPASIAKRRLPPEVEITVVNPNKKLRSDDSIDLDHQNNSSGGPEDKYCNICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLIVHMKKHYESGEGTSGSQMDDDSHTCDVCGSVFDGAKALMSHKNMHHGEEESDQSDSESAPPAPPGEFTCAQCGDGVATPRDLLAHRAMHAAPTKFFCNICKVYFARALDLSSHTRARHADNDKVFFPCAMCDRFYMNKKSLQRHIEMAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00897124;
90% Identity: iTF_00461751;
80% Identity: -