Dlor018979.1
Basic Information
- Insect
- Dircenna loreta
- Gene Symbol
- -
- Assembly
- GCA_963555665.1
- Location
- OY743098.1:14979206-14987167[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.012 1 10.6 0.9 3 23 206 227 205 227 0.92 2 23 0.26 22 6.4 0.3 1 22 602 623 602 623 0.95 3 23 5 4.4e+02 2.3 0.3 1 22 664 685 664 687 0.82 4 23 0.22 19 6.6 0.6 1 14 696 709 696 717 0.84 5 23 1.9 1.7e+02 3.6 0.1 3 23 726 747 724 747 0.89 6 23 0.011 0.93 10.7 0.1 3 23 767 788 765 788 0.94 7 23 0.078 6.7 8.0 6.3 1 23 794 817 794 817 0.95 8 23 0.094 8.1 7.8 0.0 1 23 843 866 843 866 0.90 9 23 0.014 1.2 10.4 3.4 1 23 871 893 871 893 0.97 10 23 0.00059 0.051 14.7 0.1 1 23 899 922 899 922 0.96 11 23 5.6e-05 0.0048 17.9 1.3 1 23 934 956 934 956 0.98 12 23 0.0011 0.094 13.9 4.0 1 23 999 1022 999 1022 0.96 13 23 0.027 2.4 9.4 4.6 1 23 1072 1095 1072 1095 0.96 14 23 0.00083 0.072 14.2 2.1 2 23 1120 1142 1119 1142 0.95 15 23 0.031 2.6 9.3 0.1 2 23 1148 1170 1147 1170 0.94 16 23 0.0074 0.64 11.2 0.2 1 21 1214 1234 1214 1235 0.95 17 23 0.00035 0.03 15.4 0.6 1 23 1245 1267 1245 1267 0.94 18 23 6.4e-05 0.0055 17.7 0.4 2 23 1357 1379 1356 1379 0.93 19 23 1.3e-07 1.2e-05 26.2 1.1 3 23 1386 1406 1385 1406 0.98 20 23 0.00052 0.045 14.9 1.6 1 23 1423 1445 1423 1446 0.95 21 23 0.11 9.3 7.6 0.0 1 23 1468 1490 1468 1490 0.98 22 23 0.021 1.8 9.8 0.6 1 23 1496 1519 1496 1519 0.95 23 23 0.00019 0.017 16.2 0.4 1 23 1527 1550 1527 1550 0.96
Sequence Information
- Coding Sequence
- atgaatGTGAATTATGACCGTGTTTGTCGACTGTGCTTGTCATCTAGATGCGAATTATTACCGATATTTCCTACCACCAGTTCGGATGATTTGGAACCTCCTGTCCTCGCTTCAAAGATTAATGATTGCGTGTCAGTGCAGatAAGTGAAAATGACGACCTGCCAACGAATGTCTGCAGGAAATGCATTGACAATGTCAATAACTGGCACATATTTAAGACAGTATGTGAAAGaacacaaaacaaattacaatcatttttaaataaggagAGTAACCAACTAGAAGAGgttaaaataaaaaatgaaccCTTATCTGATGAAGCTTATGATGAAGGAGTGGTTATTGATGGTTCATACCCTGATAGTGagAATGCCACCACATCAAGTAAAGTCCAGCCGGAGGGACCACCCATTTTGGCATCATTGGGGCTCACGCCGAGAAGTGATAAGGGGGTGGATAGTGAAAAAGACGAGGACTATGAAGACGAAGAAGAAATGGAGCAGCAACAATTCTCCAATGTCCCAAGTATGCCGGAAGTTTCAATAACGGTCATGAGACCCAGTGGCGAAACTCTTCATGCTCGTCAAGGCATTCAAGAAATTGCCTCCAAGGATTGTCTTGTTTGCGGTCGATCCTATAGATACTCCCACAATGCCCGAAGGCACGAACTTAACGCTCACAGTTTTGATAGGTAcaccaataaaataacacataaaaaatcTCAGTCACATATGCAACCAAAATTCAGACCAAACCCATTTAACCCAAAAGCTCGTTTAATGCCAAACCCAATTAGCCACAAAAtgcaatttaattcaaaatcgATGGCGGGGAGAATCATGCCACAGAGAATTGTTGCACCACCTAAGCCAATTCCGATCAAAACATCTAAAGCTTCGCAAAATAACTTGCCATACCCTCTTCgtataaaagctttaaaagatttacaaataaagaaaaaagaaccacaaattttgaaaacattgCTTACATCTAAACCTGAAGTTGTGGTATCTGAgcctgaaataattaattctggTCCAGAGAGTCCAGAAACATTAATTTCCGAACCGGAAATAGCATCGTTCCAAGTGGAGACAATTCTGTCAGAACCAGATGGATTCGCTAATCAACAAGACGATGAGGAAGCAGACAATGATAACCAAGGACAACATTATGATACTGTTGATATGGAATCTGATAACGAAATAGAAATTGCTCGACAAAACGAAAATGATGTTGATATTGATGAAAATCCTTTAATTGACACCGAAGAGAACCAACATGAAGAGGAAAACAATATGGAGGAAACTCAAGATGAAAATGATGGAGATGATCATGAGGATAACGAGGATAGACAAGATGATTTAGTTAACAACGTGGACGGGGAGGGTGATGATAATGCCAAAGAAAGTCAAGATGATGACGCTGAGAAAgaaaattaccaaaatattaagaacGAAGATAATGAAGAAGATGAAGAAATGCCAGCATTAAATATAGCACCAGTTGTTGAGATAAATGAGGACATGCAAACAAACTCGTACAACAGTGATGCAAATGAGGAAGAAGAAGCAGATGAAACTGTTGACCCCAACGACACAGTCGATGGTGATGAAGCAGAAAAAGATTTGGACCCAGATAAAGTGTACATCACTAAAACACAGAGAGACTTTATTTTGAAGTACCGTGATATTATTCAACAAATTAACACCAAACGGTGCCTTTGCTGTAATAAGGAACATCCACGAAGAAAAGCAGTAATACAACATTTACAGAAAAATGGACACAAGGTTCCAAAACATACTTGCTATAACTGTGTTGTGACTTTCGGACATATCGGTGCCTTGTTGAGCCACATGAGGTCTAATACCTGCACGGATCTAtggaaaatcatttataacgAGAATGGCATAACCGATGATATTGTATTGGAAGATAAACCTGATAACAAAATTCCGTACAAAGATGTTGTCAATGCTAGGTCATATGCCTGCAAATTGTGTCCGGCTAAATTTCAGCTTAAACAGTTTATAATGAAACATGTCTTAGATGTCCACGAAGATGGTCAATCACGAGTTCCCTTTTCTTGCGTTCATTGTGGGATGAgatttaaagacaaaaatattggtaaaagACACATTCGCAATGGAGATTGCACAGTATACATTGCTTGTGAATTATGTTCTGAGAAGTTTATGAACATGCAAGATTTCAATGATCATGCTGTTTCTGTACACGCTGGCAATTTGGATCCGGAAAATCAGACTAAGTGTGTCGATGGTCGACCAACCGATTGTCCCATTTGCGGCAAGAAGAACAGTAGTTATCCCAATttagtaaaacatttaaaagcagTACATAATGAAGAAAAACCTCATCATTGCCAACATTGCGACTCTAAATTTGAACAAACTACTGATCTTAACAAGCACATCTATATGGAACATTCTGATAGAAGCTTGGGTATGCAATCTATTGAGCCTGACATGTCAATTGTTAAAGAAGAGGCTGAAGAATACCACTACTCTTGTACAGAATGCAATGCTATCTTTGAAACTGTAGATGCATGGACCGATCACCAAGTTGCTGAACATAATCAGGTCGCTCATCACTGCGATCAATGTGAAAAGAAATTTCTGCGACCATCTGAACTTGCAGAACATAAAAATACCCACCTAAGAGTCAAATTTTATCCTTGTGGCGTTTGTCCCAATTCATACAGCACTCCCCAAAAGCTAACAGAACACATGCAGCAAATGCACCCTGGGGCTACCACACGTGGGGGTGATAGCGATTTCTATTGCGATATCTGTGTAAGATCATTCAAGAGTCGTCAGGCATACTCGAATCATATGCGTATTCACTCCAGGGTGCCTACTACCAACAGGAAACCAGGAGAATCTAAAGGGTTTGCACCTCAGATAGTTGGCAAACCCATAAAACAATTCTCTATGCAACCTGGATTCAGCCCATTTGTCCCAAATGCACCTTATTGTTGTGATATTTGCGGTAAAGGATTCATGCATAAGAAAAACATATGGAAACACAAGAAAGTACTCCACGCTGACCTTCTTAATGATAGGAATGACAGCGAGGAAAATACTATGCATGCTTCTACTGAAGAAGATGAATATAATGTTGACGAAAACGGTGCAATCCTGTCAACTCCACAATTTAATAGTTTCAATTTCACCAATGACGCTTTACCATATTCTTGTGAAATATGCTATAAACGATTCCCTTTAAGAACATGTTTGTTTAAACACAAACGCGCAAAGCACGGAATTTCCAATCCCAACGTTAGTGGATCTTCAGAAACACAAACTCAACCATCATCGGCGGAGGGGAGATCGAGTTGCactatatgtaaaataactttttctgATAAGAAGTCATATTATCGTCATCGAAAAAATGTACACAAGTCGGTTGTTCAGATGTGCAAAATATGTGGTAAACCATTGAATTCTACCATAGAACTATATGAGCATCTCAAAGCTGCACATGCCCGTGAATTGCTCGGTTACAATGCCAATCAAGGGCCTAGCAAGTCTCAGGATGCCGGACAAGATATGGAAGTGGAATATGACGAAGACCAAGATTCGGCAGATCCAAGTGTCGACTACCAAGCTCGATATCCTTGCGACACGTGTGGAAAGCAGTTTGTAGGGCTATTAGCTTTGCAAAACCATCAGTGCATAAATCAGATTCAGTCACAGCCGCAGACATTTGAGTGTGAAATATGTCACAAGAGCTACACGTCAATCGCCGCTTTGAAGAGCCACCGCGGATGGCATCTGCGGTCTCCAGACGGTAAAGCCGCTGCCAACAACACCGGGCTTTGGATGCCACAGAACAAGGTAACGACCAAAGTGAGCAAACACGAAGTCGTAGATCCCGTTCAACTCGCGCGCGTTCAACACACGACGCCGGCCAGCATCGCCAAAAGAAGGTTACCACCGGAAGTCGAAATAACCGTCGTCAatcctaataaaaaaatgcgatCAGACGATTCCATCGAATTAGATCACCAGAATAACTCCTCCGGCGTACCCGAAGACAAATATTGCAACATTTGCGATAAAGAATTCACAAAACGAGCGGCCTATCAGCGCCACATGGACGAAGTTCATCAACCTAACTCCGTCTTCTGTCCCGTCTGCGATAAGAGTTTTACGCGAAAGTCCACATTAATCGTTCACATGAAGAAGCACTACGAGAGTGGCGAGGGTACCTCGGGCTCCCAAATGGACGAAGATTCGCACACCTGCGACGTCTGCGGGAGCGTGTTCGACAGCGCCAAATCCTTAATGGCTCATAAGAACATGCACCACGGGGAGGAGGAGTCCGACCAGTCCGAGGACGACGGCGGCGCGGCCGTGCTGCCGCCTGGCGAGTTTACGTGCGCGCAGTGCGGAGACGGCGTGGCCACACCACGCGACCTCATCGCGCACCGCTCCATGCACGCCACGCCCACCAAGTTCTTCTGCAACATCTGCAAGGTGTACTTCGCGAGAGCCCTGGACCTGTCCTCGCACACGCGCGCCCGCCACTCCGACAACGACAAGGTGTTCTTCCCTTGCGCGATGTGCGACCgcttttatatgaataagaaGAGTCTGCAGCGTCACATCGAAATGGCTCACTGA
- Protein Sequence
- MNVNYDRVCRLCLSSRCELLPIFPTTSSDDLEPPVLASKINDCVSVQISENDDLPTNVCRKCIDNVNNWHIFKTVCERTQNKLQSFLNKESNQLEEVKIKNEPLSDEAYDEGVVIDGSYPDSENATTSSKVQPEGPPILASLGLTPRSDKGVDSEKDEDYEDEEEMEQQQFSNVPSMPEVSITVMRPSGETLHARQGIQEIASKDCLVCGRSYRYSHNARRHELNAHSFDRYTNKITHKKSQSHMQPKFRPNPFNPKARLMPNPISHKMQFNSKSMAGRIMPQRIVAPPKPIPIKTSKASQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVVVSEPEIINSGPESPETLISEPEIASFQVETILSEPDGFANQQDDEEADNDNQGQHYDTVDMESDNEIEIARQNENDVDIDENPLIDTEENQHEEENNMEETQDENDGDDHEDNEDRQDDLVNNVDGEGDDNAKESQDDDAEKENYQNIKNEDNEEDEEMPALNIAPVVEINEDMQTNSYNSDANEEEEADETVDPNDTVDGDEAEKDLDPDKVYITKTQRDFILKYRDIIQQINTKRCLCCNKEHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFGHIGALLSHMRSNTCTDLWKIIYNENGITDDIVLEDKPDNKIPYKDVVNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSRVPFSCVHCGMRFKDKNIGKRHIRNGDCTVYIACELCSEKFMNMQDFNDHAVSVHAGNLDPENQTKCVDGRPTDCPICGKKNSSYPNLVKHLKAVHNEEKPHHCQHCDSKFEQTTDLNKHIYMEHSDRSLGMQSIEPDMSIVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCGVCPNSYSTPQKLTEHMQQMHPGATTRGGDSDFYCDICVRSFKSRQAYSNHMRIHSRVPTTNRKPGESKGFAPQIVGKPIKQFSMQPGFSPFVPNAPYCCDICGKGFMHKKNIWKHKKVLHADLLNDRNDSEENTMHASTEEDEYNVDENGAILSTPQFNSFNFTNDALPYSCEICYKRFPLRTCLFKHKRAKHGISNPNVSGSSETQTQPSSAEGRSSCTICKITFSDKKSYYRHRKNVHKSVVQMCKICGKPLNSTIELYEHLKAAHARELLGYNANQGPSKSQDAGQDMEVEYDEDQDSADPSVDYQARYPCDTCGKQFVGLLALQNHQCINQIQSQPQTFECEICHKSYTSIAALKSHRGWHLRSPDGKAAANNTGLWMPQNKVTTKVSKHEVVDPVQLARVQHTTPASIAKRRLPPEVEITVVNPNKKMRSDDSIELDHQNNSSGVPEDKYCNICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLIVHMKKHYESGEGTSGSQMDEDSHTCDVCGSVFDSAKSLMAHKNMHHGEEESDQSEDDGGAAVLPPGEFTCAQCGDGVATPRDLIAHRSMHATPTKFFCNICKVYFARALDLSSHTRARHSDNDKVFFPCAMCDRFYMNKKSLQRHIEMAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00897124;
- 90% Identity
- iTF_00960326; iTF_00959567; iTF_00958813;
- 80% Identity
- -