Mpay004736.1
Basic Information
- Insect
- Meandrusa payeni
- Gene Symbol
- lrrfip2
- Assembly
- GCA_029286785.1
- Location
- JAGSMX010000006.1:15741433-15762542[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.1e-73 5.2e-69 233.3 25.4 1 268 132 409 132 428 0.86 2 3 1 2.4e+04 -7.1 18.0 1 47 429 474 427 493 0.74 3 3 0.073 1.8e+03 -1.6 2.2 149 236 481 505 468 508 0.46
Sequence Information
- Coding Sequence
- ATGGGTCAGAAATCGGAACTAACTTCGGACAATAGTGATGAAGAAAGTGGAGACGCCTTCACTGACGGTGACTTCGATGATTCAGGTGAAGAGTCTGTTACACAGCGATTGGATGTTATAAAAACCAGTCAACTGCCTGTTACTGAAACGTTTAATCCGTGTGTTGGAAAAGTAAATATCGAGAGTGATGATAAACATGAAGAAATATCAACCATTAAGAATGGCGATGATGAGGGCACTGAAGGTAGTGTTGAAAATGTAGAGAACGGACACTGTGCTCAATGTGACCAGTTGGACAATTATATGGAACAAGGCGTAGCGGATGCGCGCAAAGACTCTCAGAGCGAAATCAATCCGTCGATAGTAGGGATTCTCGGCGACCAGCACACCCATGCGGAGCAGAGACTGGCAGCGCGGCGGGCGGCACGCGCGGAGGCCCGCGAGATCCGTATGCGAGAGCTGGAGCGACAGCAGCGCGAGCATGAAGACCATGCGGACAAAGCCTTCGACATGTACTCAGAGACAGTGGGACGCCGCGGAGGTAGACTGGCGGCGCTCAGTCCGTCAATACATTCGCCGCGACGCAGTTCCGAGGATTCTGTCGATGACGTCTTCAGCATCAAAGACCTAAGGCACGAGCTGAAAGAGGTGGAGGAAAAGTTCCGCAAGGCGATGATCCTGAACGCGCAATTGGACAATGACAAGGCCGCGCTCGGCTATCAACTAGAACTACTCAAGGACAGAATAGAGGAGCTGCACGAGGAACACGCCCAGCTGCAGCGTGAACACAAAGAGAAGTGCTCGGCGCACGAACGTCTAAAACGCGAGCACGCGTCCCTGGAGCGCGAAGTGACCGCGGCGCGGGACGCCATCAGAGCACGGGACTCGGCGGCCGCGGCCGCTGGGTTTGCTTTCGTGGAGGCCGAGCTCAACGGGGTTCAAAGAGACGCGGATGAAAAGGGGGTGGAGCTCAGCGGTACGGAACCCGAGGCGGTGGTGGCTCAGGGATTCGGTAATGTGCCACCGCTGGCGCTAGTATCGCATCATTCGGAACAGTTACTTAATGATGCCGGTGAAGGAACACTGGACGTGCGGTTACAGCGGTTGGTGAGCTCGAAGCAGGCGCTAGAGTCCGAGGTGCGCAAGCTGAAGCTCTGCCTCAACGAGGAGAGGGCCGCGCGACAGAACGGGGTGGCATCACACCACGACAGGGAACATGACAGCGAGCTGGAATCGCTGCGCAAATCAGTTGCTGAAGCGAAAGGTAGAGCTGCCCGGGCGGAAGCGGAAGCGGCGCTACAAGCTGCGGCCGTGGCTAGGTTGGAGGCCCAGGTGGCGCGGCTGCGGGCCCGCCAGGAGCACCAGGACGAGCACGAGGAACAGCTCAAACAAGAGCGGCGCCGGCTACAGAGAGAGGCAAGAGAAGCTCTCAATCGAGTGGAAGAATTGGAGACAGAGAACAGCCACCTGACGAAGCGGCTTGACAAGCTCAAAAACGCCAAATCCGCACTGCTCAAGGAACTCTGA
- Protein Sequence
- MGQKSELTSDNSDEESGDAFTDGDFDDSGEESVTQRLDVIKTSQLPVTETFNPCVGKVNIESDDKHEEISTIKNGDDEGTEGSVENVENGHCAQCDQLDNYMEQGVADARKDSQSEINPSIVGILGDQHTHAEQRLAARRAARAEAREIRMRELERQQREHEDHADKAFDMYSETVGRRGGRLAALSPSIHSPRRSSEDSVDDVFSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEHAQLQREHKEKCSAHERLKREHASLEREVTAARDAIRARDSAAAAAGFAFVEAELNGVQRDADEKGVELSGTEPEAVVAQGFGNVPPLALVSHHSEQLLNDAGEGTLDVRLQRLVSSKQALESEVRKLKLCLNEERAARQNGVASHHDREHDSELESLRKSVAEAKGRAARAEAEAALQAAAVARLEAQVARLRARQEHQDEHEEQLKQERRRLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01337765;
- 90% Identity
- -
- 80% Identity
- -