Mcon000931.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Mamestra configurata
Gene Symbol
-
Assembly
GCA_002192655.2
Location
NDFZ01005472.1:794198-805049[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 7.6e-05 0.0071 17.3 0.1 3 23 135 155 134 155 0.97
2 16 6.9e-07 6.5e-05 23.7 1.2 1 23 161 183 161 183 0.99
3 16 4.3e-06 0.0004 21.2 2.7 1 23 189 211 189 211 0.99
4 16 2.8e-06 0.00027 21.8 2.6 1 23 226 248 226 248 0.98
5 16 0.00012 0.012 16.7 0.6 1 23 263 285 263 285 0.98
6 16 3.9e-05 0.0037 18.2 3.1 1 23 300 322 300 322 0.98
7 16 2.7e-07 2.6e-05 25.0 1.5 1 23 337 359 337 359 0.99
8 16 0.00012 0.011 16.7 2.8 1 23 365 387 365 387 0.98
9 16 8.5e-06 0.00081 20.3 2.1 1 23 393 415 393 415 0.99
10 16 0.028 2.6 9.3 1.8 1 23 422 444 422 444 0.98
11 16 4.6e-07 4.4e-05 24.3 2.3 1 23 450 472 450 472 0.99
12 16 0.032 3 9.1 1.8 1 23 479 501 479 501 0.98
13 16 1.9e-06 0.00018 22.4 1.5 1 23 507 529 507 529 0.99
14 16 0.0015 0.14 13.2 0.3 1 20 535 554 535 557 0.93
15 16 4.7e-05 0.0044 18.0 1.5 2 23 564 585 563 585 0.96
16 16 2.3e-06 0.00021 22.1 1.3 1 23 591 614 591 614 0.97

Sequence Information

Coding Sequence
ATGTTCGAACAGCAGATCAAGGCAGAACCTATGAGTTTCTACACATCTCATCCCCACGTACACTCCGGTCCCCCAACAATAATACGGTCAGACTCAAGCCATGCATCTATCATCAACATGAACCAACATCACCAGACACACCAGGAGGATTCTAAAGACAGCCTCATAGTACAACATCAAGTACAACACCAACAAGATCTCATGGAACAACATCAACAACAACAAGAAATGCATCAACAAGACGACGAGctgAGCTTCAAAGGAATGGAAGATGAAGGCGTTGACATGGATATGGACGGACGACAATGTTCGCAGGGTATGGGAGTGGACATGGGATCAGTTCAAACTAAAATGGAAGTGTCAAATGGGGGTCAGTCGACGCCACGATCTAAACCTCAGGCCTGTAAGGTCTGCGGTAAAGTTCTGTCGTCGGCCTCTTCTTACTATGTCCACATGAAGCTTCACTCAGGGAACAAACCTTTTCAGTGCACTGTGTGCGACGCAGCTTTTTGCCGTAAGCCGTATTTAGAAGTGCACATGCGCACACACACAGGAGAGCGTCCCTTCCAGTGCGACCTCTGCCTCAAGCGATTCACGCAGAAGTCCAGTCTCAACACGCACAAACGTGTTCACACAGATGAGCACATGCGCGCGTTGATGGTGAAGGACCGGCCCTACAAGTGTGAGCTCTGTCAGATGCGGTTCACGCAGAGCTCCAGCCTCAACCGACACAAGAAAATTCACACGGAGGAACACAGACGTGCGCTGCTGGCTAAGGATCGGCCCTACCAATGCGGCGTCTGCTTTGTGAGATTCACCCAGAAATCAAGTTTGGGCCGGCACGGAAAAATACATACCGAGGAGCACAGACGAGCCCTGTTAGAGAAAGTGCGGCCGTACCAGTGCCACATCTGTTTTATGCGCTTCACTCAGAAGTCCAGCCTGGGACGACATGGGAAAATACACACTGAGGAGCACATCCAATCGCTGATCAACAAAGTGCGCCCCTATCAATGCGACATCTGTGACAAGCGGTTCACTCAGAAGTCCAGCCTTGGTACTCATAAACGTATACACACCGGGGAGCGGCCGTTCCAGTGCACCGTCTGCCTCAAGTCCTTCACGCAGAAGTGCGCGCTCAATTTGCACGAAAAAATACATACGGGCGAGCGGCCCTATCAGTGCGACGCGTGTCTGAAGCGCTTCACGCAGAAGTCCAGCCTCAATATACATAAGAGGACGCACACAGTCCAGGGCAGACCGTTCCAGTGCCTGTCGTGCCCCGCCGCCTTCACCTGCAAGCAATACCTGGAGATACACACGCGCACGCACACCGGCGAGCGGCCGTATCAGTGCGACATCTGCCTGAAGCGCTTCACGCAGAAGTCCAGTCTCAACATCCACAAGCGGACGCACTCAGTGCAGGGGCGGCCCTTCCAGTGCCTGCAGTGCCCGGCCGCCTTCACGTGCAAGCAGTACCTGGAGATCCACAACCGCACGCACACCGGCGAACGCCCCTACCAGTGTGACGTATGCCTCAAGAGATTCGCGCAAAAATCTACACTCAATATACACAAACGAACGCACACAGGTGAACGTCCTTATGCTTGTGATATTTGCCAGAAACGTTTTGCTGTGAAGAGCTACGTAACAGCACACAGATGGTCTCACGTGGCCGACAAGCCGTTGAACTGCGACCGCTGTTCCATGTCGTTCACATCCAAGTCGCAGTTCGCGCTGCACCTCCGCACGCACTCAACCGGCTCTTGCTACGAGTGCAGCGTCTGCGGACGTTCCTTCGTCAGGGACAGCTATCTAATAAGACACCACAACCGTGTCCACCGCGAGAACCACAGCAACGTGTCGGCGAACAGTATGGGCACCATCAACAGTGTTGCCACCAACACCAACCACTCGAACAACAGCAACTTTGACTCGCCCGGCGTTTGTGACTTAAGCTTCGTTCCCATGGTGAATCGTTATATGACATCCCAAGGGACCCAAGTGTCCATGCAGGATACCAACAAAATGTCTGCGATGTCGCCACAGTCTATCGCGTCTATTTcGTCGCCCCCTCCCTCGCATACCCCTACGCCCCAGCCCCAGATGTCTGGTCAGATGCATCTTGACTGA
Protein Sequence
MFEQQIKAEPMSFYTSHPHVHSGPPTIIRSDSSHASIINMNQHHQTHQEDSKDSLIVQHQVQHQQDLMEQHQQQQEMHQQDDELSFKGMEDEGVDMDMDGRQCSQGMGVDMGSVQTKMEVSNGGQSTPRSKPQACKVCGKVLSSASSYYVHMKLHSGNKPFQCTVCDAAFCRKPYLEVHMRTHTGERPFQCDLCLKRFTQKSSLNTHKRVHTDEHMRALMVKDRPYKCELCQMRFTQSSSLNRHKKIHTEEHRRALLAKDRPYQCGVCFVRFTQKSSLGRHGKIHTEEHRRALLEKVRPYQCHICFMRFTQKSSLGRHGKIHTEEHIQSLINKVRPYQCDICDKRFTQKSSLGTHKRIHTGERPFQCTVCLKSFTQKCALNLHEKIHTGERPYQCDACLKRFTQKSSLNIHKRTHTVQGRPFQCLSCPAAFTCKQYLEIHTRTHTGERPYQCDICLKRFTQKSSLNIHKRTHSVQGRPFQCLQCPAAFTCKQYLEIHNRTHTGERPYQCDVCLKRFAQKSTLNIHKRTHTGERPYACDICQKRFAVKSYVTAHRWSHVADKPLNCDRCSMSFTSKSQFALHLRTHSTGSCYECSVCGRSFVRDSYLIRHHNRVHRENHSNVSANSMGTINSVATNTNHSNNSNFDSPGVCDLSFVPMVNRYMTSQGTQVSMQDTNKMSAMSPQSIASISSPPPSHTPTPQPQMSGQMHLD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00896125;
90% Identity
iTF_00786174;
80% Identity
-