Mcon012344.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Mamestra configurata
Gene Symbol
-
Assembly
GCA_002192655.2
Location
NDFZ01004746.1:63134-66893[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 26 0.13 12 7.1 0.1 2 23 7 29 6 29 0.90
2 26 7.9e-05 0.0075 17.3 0.7 2 23 50 72 49 72 0.96
3 26 5.8e-05 0.0055 17.7 4.1 1 23 77 99 77 100 0.96
4 26 1.2e-05 0.0011 19.8 1.2 1 23 104 127 104 127 0.95
5 26 0.058 5.5 8.2 0.4 2 23 130 152 129 152 0.95
6 26 0.035 3.4 8.9 1.1 2 20 158 176 157 181 0.91
7 26 0.0099 0.94 10.7 2.7 2 23 226 248 225 248 0.93
8 26 1.7 1.6e+02 3.6 0.3 2 23 277 299 276 299 0.94
9 26 0.0027 0.26 12.4 0.0 1 23 321 344 321 344 0.92
10 26 0.00016 0.016 16.2 0.8 1 23 349 372 349 372 0.94
11 26 0.00016 0.015 16.3 1.1 1 23 378 401 378 401 0.96
12 26 0.00095 0.09 13.8 2.3 1 23 438 460 438 460 0.96
13 26 0.025 2.4 9.4 0.1 3 23 489 510 489 510 0.96
14 26 0.0027 0.25 12.4 1.9 1 23 530 553 530 553 0.96
15 26 2.6e-05 0.0025 18.8 0.5 1 23 558 581 558 581 0.96
16 26 0.00097 0.092 13.8 0.8 1 23 586 609 586 609 0.96
17 26 0.00053 0.05 14.7 1.1 3 23 613 634 612 634 0.96
18 26 0.0053 0.51 11.5 1.4 2 21 642 661 641 662 0.94
19 26 0.0086 0.82 10.8 3.4 1 23 716 739 716 739 0.93
20 26 0.61 57 5.0 0.0 2 23 812 835 811 835 0.94
21 26 1.2e-05 0.0012 19.8 0.1 3 23 842 863 841 863 0.94
22 26 0.0022 0.21 12.7 2.8 2 23 868 890 867 890 0.94
23 26 0.007 0.66 11.1 5.1 1 23 895 918 895 918 0.96
24 26 1.5e-05 0.0014 19.5 5.0 1 23 922 945 922 945 0.97
25 26 0.00018 0.017 16.1 0.3 2 23 952 973 951 973 0.96
26 26 0.00022 0.021 15.9 0.6 1 23 979 1001 979 1001 0.98

Sequence Information

Coding Sequence
ATGGATGTTTCCGATGTCACTTGCGAGATTTGTTCCGAAAGTTTTCCGTTCTTAGACGAAATCATCGACCATTTGATTTTTAAACACCAATTGCCTTACGACAAAGATATAGAGATGCCGTTTTCTGCGTACAGGCTAGTAGATCTCCAGTGTCTCCTTTGCGATAAAAGTTTCAACTTCTTACGTAAATTAATCAGTCATATGAATACCGCGCATCCCAATAACAGCTTTGAGTGTACCGAATGTAAAAAGACGTTTAACAAAAAGAGGGATTTAGATTCGCACTTAAGATTGCATCATAAGAAATATCATTCTTGTGCGAAATGTGATAAAACGTTCCCAACCAACTCCGCGTTACAGATTCATAGGTCTAAAGCCCATGCTTCAACATGTAACATCTGCTTCCAAGTATTTTCGTCAGACGGCAAGCGGTTAGCTCACCTAAAATCAGATCATGATACTGAACTAACCCAATGTGGATTCTGCAATAAAGTTCTAACAACAAAACAGGCGTTTATAAGACATGCTGCAAATTGCATACATACACCTAAGGAAGAGACCGTCATAATTGATGACGAAGACAAAAAGATATCCGTGAAAGAAATAAGAGAAAGTTTGGCAGCCATCTTTAACATGACTACCGCTCTTCCTTTCAAATTCTTTATGAATAGGTTACGCTGTTTCTATTGCACAAGAGACTTTACCACTTGTGAGGAATTAAAGGAACATTCGCTGAGTGAACATCCTCATTGCGATATATCCTTTAAGTCTATGAGATTAAGGAACAGATATGATGGTGTCCAAATCAAAGTTGATACTTCTTCCTTGTCCTGTAGACTATGCCACATCGCATTGCAGGATCTGAACGATTTAATCGACCATTTGACCAAAGAGCATAAAGTTAAATGCGACATGACTGTTGAGAGTAATTTACAGCCGTTCAAGTTGATTAAAGACAACTATCCGTGTCCTATTTGCGGTGAAGTCTACAGATATTTTGGCGTTTTACTCAAGCATGTTAGTGCGTCTCACAGTGGAAATAGGCACATATGCATGTATTGCGGGAGAGCGTTCAGAACGGATCCCAATCTTAGAGCTCATGTTTCAAGGCGTCATAAAACCGCTGTCAATCACAAGTGTACTAGTTGTGATCTACAATTTCCTACTAATAGTGCGTTAAGAAATCATCAAGGAACTGTCCACGATGGTCTGCCAGGACCGTACGAAGGCTGTACCTCTGAGCGACGAcggaaaaacttgaaaatactGTTCAACCACACGACAATCATGCCTTTTAAATGGCGGGGCAAATACCTCTGCTTCTACTGCGGAAAAAACTATACAGAGTACGCAGAATTTAGAAAACACACAAAATCCCACGGACTTTGCACCACTAAAGATTACTCCTTGAAACTAATCAAAGGGAATAATGTAGAAATTAAAATCGACGTCTCGGAAATCGGTTGTGACATCTGCAATGAACCCTTCAGCAGGTTCGAGGAAATAATCGATCATTTGATCTCGAAACATAATTTGGAATACaacaaaaatatcgatattcCCTTCCAGGAGTACCGATTAGTCGATTTTCGATGTTTGCACTGCGAAGAACGGTTTTCCTACTTCGGATATTTAGTAAAACACGTTAACAATGCTCACCCACAGAACTGCTTCATTTGCGATGATTGTGGAGTTACTTTCAACAAGAAAAGGGATCTGTCGATACATTTGAGAAATTATCACAGACAAGGAGGATATCCATGCGATTTGTGCTTGAAGAACTTCGAAACACGACTTATGTTGCGGAGACATCAAAATAATATGCATTTTAGGCATTGCAAGAGCTGTGGTTTACGATTCGCGTCCCTTTCTCTATTACAAAAACATGTCCAAGTCGATCATCCCCAAAATGAGAGCAATATGAAGTGTAATTACTGCTCCAAGGAGTTCCACACTTCTTTAGGTTTAAAACAGCATATTAGCAAATGTAAAGTCAAAATCATTTGTCAGGTCGAACCCCAAACTTCTTTTCTGAACGACAATAACATAGAAccgaagaaaaaacaaaatatcctTCAAATAAGACAGAATATACAGTGTGTACTGAACATGTCGACTGCTGTgccttttaaattcttttcgAAATACTCTTGTTTTTATTGCTCGAAGAAATTCGTAGAATTTGACGAGTTACGCCACCATACTACTCTAGAACACCCTGTGTGCGATCTGAAGTCCAAATGCATGAAGAAATGTAAAGGAGAAAGGATAGCTGTCAAAATTGACATTTCTAGTTTAGCTTGCAAATTATGTTGCCTCCCTATGCCTAACTTAGAAGATTTGATTAGCCATTTAATAGCAGAACATAAGGCAAACTATGACACGTCAATTTCTGGCTGTTTAGAACCGTTTAGGGTTATAAAAGACAACATGCCTTGTCCCATATGCCCGGACACCGTCTTTCGATACTTCGGAATTTTGCTTCGGCATATGAACTCCGAACACAGCAATAACAATCGAATCTGTGACTTTTGCGGTCGTAGTTTCAGGAATGCTGCAAATCTCAACGTGCATATTACATACGCCCATACAGGTTCTTGCGAATGTGATATTTGCGGTGTCAAATACAAGAACCAATGGTGTTTAGCGCGGCATAGAGCGAGGACGCATGACGCTAAAGACCATAAATGCCCAAAATGTCCAGAACAGTTCCAGTCAcagtaccataaacaaaaacatttaataaaaatgcataATGTTGGCCACAAATGTAGTTATTGCGGTAAAATGTTTACTAGAAACTCCTTCATGAAAGACCATGTGAGAAGGACTCATTTGAAGGAAAAGAACATTCCCTGTTCGATTTGCAATGAGAAGTTTTTCGATAATTATCTTCTAAGGATGCATATGGTGAAACACGAGGGTGATAGGAAATTCAGTTGTACTGTTTGTGCAAAAGCTTTCTTGAGGCGAAGTAATTTGAGTTCGCATATGGAAATGCATAAAAAGTACGGACATGTGCAGTTGCAGAGTTAA
Protein Sequence
MDVSDVTCEICSESFPFLDEIIDHLIFKHQLPYDKDIEMPFSAYRLVDLQCLLCDKSFNFLRKLISHMNTAHPNNSFECTECKKTFNKKRDLDSHLRLHHKKYHSCAKCDKTFPTNSALQIHRSKAHASTCNICFQVFSSDGKRLAHLKSDHDTELTQCGFCNKVLTTKQAFIRHAANCIHTPKEETVIIDDEDKKISVKEIRESLAAIFNMTTALPFKFFMNRLRCFYCTRDFTTCEELKEHSLSEHPHCDISFKSMRLRNRYDGVQIKVDTSSLSCRLCHIALQDLNDLIDHLTKEHKVKCDMTVESNLQPFKLIKDNYPCPICGEVYRYFGVLLKHVSASHSGNRHICMYCGRAFRTDPNLRAHVSRRHKTAVNHKCTSCDLQFPTNSALRNHQGTVHDGLPGPYEGCTSERRRKNLKILFNHTTIMPFKWRGKYLCFYCGKNYTEYAEFRKHTKSHGLCTTKDYSLKLIKGNNVEIKIDVSEIGCDICNEPFSRFEEIIDHLISKHNLEYNKNIDIPFQEYRLVDFRCLHCEERFSYFGYLVKHVNNAHPQNCFICDDCGVTFNKKRDLSIHLRNYHRQGGYPCDLCLKNFETRLMLRRHQNNMHFRHCKSCGLRFASLSLLQKHVQVDHPQNESNMKCNYCSKEFHTSLGLKQHISKCKVKIICQVEPQTSFLNDNNIEPKKKQNILQIRQNIQCVLNMSTAVPFKFFSKYSCFYCSKKFVEFDELRHHTTLEHPVCDLKSKCMKKCKGERIAVKIDISSLACKLCCLPMPNLEDLISHLIAEHKANYDTSISGCLEPFRVIKDNMPCPICPDTVFRYFGILLRHMNSEHSNNNRICDFCGRSFRNAANLNVHITYAHTGSCECDICGVKYKNQWCLARHRARTHDAKDHKCPKCPEQFQSQYHKQKHLIKMHNVGHKCSYCGKMFTRNSFMKDHVRRTHLKEKNIPCSICNEKFFDNYLLRMHMVKHEGDRKFSCTVCAKAFLRRSNLSSHMEMHKKYGHVQLQS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00851011;
90% Identity
iTF_00173442;
80% Identity
-