Mcon005760.1
Basic Information
- Insect
- Mamestra configurata
- Gene Symbol
- Lrrfip1_1
- Assembly
- GCA_002192655.2
- Location
- NDFZ01004330.1:1-9071[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.025 3.5e+02 0.9 0.6 44 91 54 102 30 107 0.75 2 2 1.2e-62 1.7e-58 198.9 16.3 1 174 122 291 122 299 0.94
Sequence Information
- Coding Sequence
- ATGGGACAGCGCTCCGAAGTGGCCACGCCTGACAATAGTGACGAGGAGAGCGGAGACGCCTTCACTGACGGAGATTTCGGTGATTCTGATGACGAAACGATCGTCGAACGCGCTGATGAAGCTAAGCCAGCACACATGCCGATCAATGAAGTTGTTAAAGATGATATTCAGAAGAGTGCTGCTACTAATGGCCACTCTAACGGTAGTATAGATGAGCAGCCTAGAATGAATGGCCGAAAGAATAGCGAAGCTCATTCGAGTGATATGGAAAACCAAAGCTTAGTATTATCGGATTTGCGCCGAGACTCACACGGCGACCAGAATCCTTCAATCGTTGGCATTCTCGGCGATCAGCAGAACCATGCGGAGCAGAGGTTAGCAGCGCGACGAGCGGCGCGGGCCGAGGCGCGAGAGATACGCATGCGCGAGCTGGAGAGGCAGCAGCGCGAGCAGGAGGATCATGCGGACAAGGCCTACGATATGTATGCCGGCAAGACACCAGAGACGGTGGGTCGTCGCGGCGCTACGAGGCTGACGGCGCTGAGCCCGGCCGTACACTCCCCGAGGCGAAGCTCTGAAGACTCCATCGATGATGGCTTCAGCATCAAGGATCTTAGGCACGAGTTGAAGGAAGTGGAAGAGAAGTTCCGCAAGGCGATGATCCTGAACGCGCAGCTGGATAATGACAAGGCGGCGCTCGGATACCAGCTGGAGCTGCTGAAGGATAGGATAGAGGAGCTGCATGAAGAGTACGCGCAGCTTCAGCGCGAACACAGAGAAAAATGCTCATCATTCGAGCGTCTAAAGCGCGAGCACGAGTCGGTATCTCGCGAGCTGAGCGCGGCGCGGGACGCAGTACTCGCGCGGGATGCCGCCGCAGCGGGAGCAGGCTTCGCCTT
- Protein Sequence
- MGQRSEVATPDNSDEESGDAFTDGDFGDSDDETIVERADEAKPAHMPINEVVKDDIQKSAATNGHSNGSIDEQPRMNGRKNSEAHSSDMENQSLVLSDLRRDSHGDQNPSIVGILGDQQNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAGKTPETVGRRGATRLTALSPAVHSPRRSSEDSIDDGFSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYAQLQREHREKCSSFERLKREHESVSRELSAARDAVLARDAAAAGAGFA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00667507;
- 90% Identity
- iTF_00667507;
- 80% Identity
- -