Eoch016813.1
Basic Information
- Insect
- Eremobia ochroleuca
- Gene Symbol
- lrrfip2
- Assembly
- GCA_949629135.1
- Location
- OX451396.1:2356605-2363652[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.018 3.4e+02 1.3 0.2 43 91 53 102 34 107 0.80 2 2 2.8e-54 5.4e-50 171.4 9.9 1 138 122 255 122 258 0.94
Sequence Information
- Coding Sequence
- ATGGGACAGCGCTCAGAAGTGGCCACGCCTGATAATAGTGACGAGGAGAGCGGGGATGCCTTCACTGACGGAGATTTTGGTGATTCCGATGACGAGACGATCGTCGAACGCCTTGATGAAGCTAAGCCTGCTCACATACCGATAAATGAAGCTGTAAAGGATGATATTCAGAAGAGTGCTGCTACTAATGGTCACTCTAATGGTAGTGTAGATGAGCAGCCCATAATGAATGGGCGTAAAAATAGTGAAGCTCATTCAACTGATATGGAAAACCAAAGCTTAGTACTATCGGATTTGCGCCGAGATTCACACGGCGATCAGAATCCTTCAATCGTTGGCATTCTCGGTGATCAGCAGAATCATGCAGAGCAGCGGTTAGCAGCGCGACGAGCAGCTCGGGCTGAAGCGCGAGAAATACGCATGCGTGAGCTGGAGAGGCAGCAGCGCGAACAGGAAGATCATGCCGACAAGGCGTACGATATGTATGCCGGCAAGACACCAGAGACGGTGGGTCGTCGAGGCGCTACGAGGCTGACGGCGCTCAGCCCGGCCGTACACTCACCGAGACGAAGCTCTGAAGACTCCGTTGATGATGGTTTCAACATCAAGGACCTTAGGCATGAGTTAAAAGAGGTGGAGGAGAAGTTCCGCAAGGCGATGATCCTAAACGCGCAACTCGACAACGACAAGGCCGCGCTCGGCTACCAGTTGGAGCTGCTCAAGGATAGGATAGAGGAGCTGCACGAGGAGTACGCGCAGCTGCAGGTAACAATCATGTGA
- Protein Sequence
- MGQRSEVATPDNSDEESGDAFTDGDFGDSDDETIVERLDEAKPAHIPINEAVKDDIQKSAATNGHSNGSVDEQPIMNGRKNSEAHSTDMENQSLVLSDLRRDSHGDQNPSIVGILGDQQNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAGKTPETVGRRGATRLTALSPAVHSPRRSSEDSVDDGFNIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYAQLQVTIM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00952734;
- 90% Identity
- iTF_00952734;
- 80% Identity
- -