Basic Information

Insect: Mamestra brassicae
Gene Symbol: IKZF1
Assembly: GCA_905163435.1
Location: LR990993.1:13460029-13467532[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 3.5 2.9e+02 3.0 0.9 1 23 54 77 54 77 0.94

2 20 0.095 7.9 7.9 4.1 1 23 84 107 84 107 0.97

3 20 5.5 4.6e+02 2.3 4.0 1 23 191 213 191 213 0.96

4 20 0.0019 0.16 13.2 1.0 2 23 219 240 218 240 0.97

5 20 2.3 1.9e+02 3.5 1.4 1 23 246 268 246 269 0.94

6 20 0.23 19 6.7 3.4 2 22 501 521 500 521 0.95

7 20 0.095 7.9 7.9 2.6 1 23 618 640 618 640 0.95

8 20 0.66 55 5.2 0.3 2 23 777 798 776 798 0.96

9 20 0.0013 0.1 13.8 0.5 2 23 878 899 877 899 0.96

10 20 0.15 12 7.3 0.3 1 23 907 929 907 929 0.97

11 20 5.5 4.6e+02 2.3 2.6 1 23 965 987 965 987 0.93

12 20 0.00027 0.022 15.9 4.0 1 23 995 1017 995 1017 0.99

13 20 0.92 77 4.8 2.2 1 23 1101 1123 1101 1123 0.97

14 20 1.1 89 4.6 1.8 1 20 1181 1200 1181 1203 0.92

15 20 0.72 60 5.1 0.6 1 23 1302 1324 1302 1324 0.94

16 20 0.006 0.5 11.7 1.1 1 23 1330 1352 1330 1352 0.96

17 20 0.0074 0.62 11.4 2.6 1 23 1442 1464 1442 1464 0.97

18 20 0.00019 0.016 16.4 1.4 1 23 1470 1492 1470 1492 0.99

19 20 0.92 77 4.8 2.7 1 23 1582 1604 1582 1604 0.96

20 20 0.011 0.9 10.8 5.6 1 23 1615 1637 1615 1637 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	3.5	2.9e+02	3.0	0.9	1	23	54	77	54	77	0.94
2	20	0.095	7.9	7.9	4.1	1	23	84	107	84	107	0.97
3	20	5.5	4.6e+02	2.3	4.0	1	23	191	213	191	213	0.96
4	20	0.0019	0.16	13.2	1.0	2	23	219	240	218	240	0.97
5	20	2.3	1.9e+02	3.5	1.4	1	23	246	268	246	269	0.94
6	20	0.23	19	6.7	3.4	2	22	501	521	500	521	0.95
7	20	0.095	7.9	7.9	2.6	1	23	618	640	618	640	0.95
8	20	0.66	55	5.2	0.3	2	23	777	798	776	798	0.96
9	20	0.0013	0.1	13.8	0.5	2	23	878	899	877	899	0.96
10	20	0.15	12	7.3	0.3	1	23	907	929	907	929	0.97
11	20	5.5	4.6e+02	2.3	2.6	1	23	965	987	965	987	0.93
12	20	0.00027	0.022	15.9	4.0	1	23	995	1017	995	1017	0.99
13	20	0.92	77	4.8	2.2	1	23	1101	1123	1101	1123	0.97
14	20	1.1	89	4.6	1.8	1	20	1181	1200	1181	1203	0.92
15	20	0.72	60	5.1	0.6	1	23	1302	1324	1302	1324	0.94
16	20	0.006	0.5	11.7	1.1	1	23	1330	1352	1330	1352	0.96
17	20	0.0074	0.62	11.4	2.6	1	23	1442	1464	1442	1464	0.97
18	20	0.00019	0.016	16.4	1.4	1	23	1470	1492	1470	1492	0.99
19	20	0.92	77	4.8	2.7	1	23	1582	1604	1582	1604	0.96
20	20	0.011	0.9	10.8	5.6	1	23	1615	1637	1615	1637	0.98

Sequence Information

Coding Sequence: ATGCTACAGCAGATGTCCTCGTCGCCGCGCGCACAAGTCGGCGAGGTCGCGACTATCGTGCGCCACCTTGAAGGCCGCGTCTGCGGCGACGTGTCTTCGGAGGCTTCTTCGGACGCCGCCGAAGATTTCGAATTACCACAGTGCAAGATAAGGAGGAATTATAATTGCACCAAGTGCACGTTCTATACGCAGAACCCGCGCGCTTATCTCGTCCACACGCGTGACGCTCACTTCGTCAGACTCAAGATTTACGATTGTCCACACTGTGTTTACGCCTCGAGACATCATCAAAAACTTATAAGACACGTCAAAATGGTTCACGGaggaacaaaacaaacttctgcGACTGCTAAAGTGGAAGAGCTATCACCTCCCCCCAACGATAACATGGAGCCAGCAGAGCGCATTGAAGACATGCTTGAGGAAGTCGAGGACTGCGAGGAGATGATGATGGAAGTAGATGAGGACTCCATGGACCAACCTGATGATGTCGACGGTGACGGCGACCAAAGTGTAGACTTCGGATCGCCCTATCGGAGAGCACGTCTGTCAAAAGCTAAGGGCAAATTCTTCTCATGCGATAAGTGTAACTATGTCACCCACATAAGAGCTAGATTCACAAAGCACGTGAAGTATCATTCAATGCCTATGATCAAGTGTACCATGTGTGATTTTCGAACACCATACAAGTGGAATTTGGACCGTCATATGAAGAACCACGGTGGAAATGGAAGTTTCAATTGTTCGATGTGCAACTTCACGGCGGACATCAAGCAGAGTCTGACGGTGCACGAAATGAATCATCACACACCGGCAACGGGCCAATCGCTGCCGAGTCGCCGCCGCAACCGGGTGGGCGCCAGCGACACGGTTATCGCGGAGTACGACGCGGCGAGCGCGTTGCTCCCCAAGGAGGAAGAAGGGAGCGGCGACTCGCGGTCCTCACACTCGGTCTCGGACATGGGTCTCCAATACGCAGAGAGAGAACTAGTCAGTTGCAAAAGTGATTCCAACGACGGTACAGCTTCTGATGCAATCACCAACCGAAAGGAAACTTCGCAAGATGGATACAACCTTTCACCAACTCATAGCGCAGACGAGAAGCTCCAAAAACAATGCAGGAAGATTCCCAGGCCAATACCACAACTCATACCGCTGAATTCATCGACACCAAACCAAAAACAAACCTGTTCTGGTGAACCACCACAGAAAAAGTTCAAGGAATCTTTACCCGACAGCGATGATGTATCTGCTGAAAATACTCTCTTACCAGCAAACCCATCGATAAAAGAGACTGCAGGTCGAAAGAAAAATGAATCATTTTTCGACAGATTAAAAGAAAGACTGCTTACAGAAACAGGCGAAGAAGGTTCACTAATATGTAAGATCTGTGGATTTGAAAGTAAATGCCTATCGGAACATTCTGTACACGAGAAAAATTGTTCTCCACAAACAAATCGGATCAATGCAAACACGTCGCTTAAAAGTTTAAGTTCCACTCGATGCCAGAATTGTAGACACAGGTGCAAGTCTAGTGCAGACTTGTACATCCACATGCAAACTTGCGTTAAAAGCGACTCCGCCGACAATGAAACCTCTATCAAAATTGATAGTAGTAATGATGGAGTCATTCCAATCCATGAAACAGAGACTGAGCCTCATCCAATGGAAAACGTCGTTTTCGTTTGGAACAATATTAACCACGACCCTAACAAGTTTGATGTACCCCTagacataaatataaatgatgATTCCACTCTACCAGAAATGCATCGAGGTTTTGATGCTGAGATTGTTGATGATAATGAAAGCATGAATTTGTCGCCGAGTCAAGCTATTGGAAGGAAGGTATTTAAATGTCCAcattgtccattcttctccacaACAGCATCCAGATTTCATGTTCATATCGTCGGTCACTTAAACAAGAAACCGTTTGAATGCTCCCTCTGCAAATATAAATCTAATTGGAGATGGGATATCACCAAACATATTAAATTGAAATCCGCGAGGGATCCCGACCATAATGAAGCAAAAGTACTTATGACCGATGAAACAGGAAGAAGAAACTATAGCAAATACAACAAATTCTTAGCAATGCCTGTTTTAAACGAACATGGTGAAAATGAGTTCCATTACCTGGATCCTAACACTGCAGTCGACAGCACGATGGAAATTGATGAATCATTTAATGAAATATCCGACGTTATGAATGTACAATTTGAAATGCAACCGCTTAACTTACAGACACAACACATTGAAGATAATTACAACTTTATTGATAATAGAGGTCTCAACGATATGAAGAAGCCCAAGAAGACGTTATGGAAatgtaaaaaatgtaattacaaagatCCCTCAAAAGAAGCGCTATTAGAACATGTTCGTGAACACTCCAGATCGGAAGGCTTCCATGAAGAGCCAAATAAACCACCTATTAAGAAACCTGAAAACAATACTCCCGACCCAGCAGATCTGGCGTACCGTTGTGGACATTGCAATCAGCTATCTAATTGGAAACATGTCATCCAGCGCCATTGCCGATTAAAACACGATGGAGTGATCAAAGTGATAACTACAGTTAAACCAAAACCTGATCCACCGATGAACATCAATGAGATCAACATTGATACTTGCAACAAGTGTCCGTACAGGACGAGTGACAAGAAGCTACTCATCGCTCATTTACAACAGCATCAGCCCTCGCCAAATTCTATTTTCAAGTGCTACTTCTGTCCGTTCTTCGTGAAGGATGAGCCAGAATTAATTCAACATCTGCTCCTGCACGGTATCACCGACCCAGAAGATTACATCGCAAAAGCAATGGGAACTAAATCCCCAGGCCCAGAACCGCAAGTTCCTGCTACTACGTCATTAAACTCGACAAAGCGCCACAAATGCATAGAATGTCCATACGAAACAAACAGTAAGTCACAATTCATGTACCACGAACAATTTCATCGACTGCCGGCGGATACGCCATACAAATGTCCAGAATGCAACTACAGCGTTTCTAAGAGACACCTGCTGCACCAGCATCTGCGAGTCCACGGCATCGCAACCAAAAGAATTGAAACCGAGGCCGAATTAGAAGCATCAACCTCCACCCAAAACAAGATGGATAAAACGGACTCCCATATTAATCTTGATGAAATACCATTTGTCTGGGTTTCGGCCAAGAATGAGTTTCATAAAATGTACAAGTGCCGATACTGTTCATACGTTAATGctataaaatgcaaaataccaAATCATGAAAAAATTCATTGCATCGTACTCGAAAACAATGATACAACTATTTACAAGTGTTTGGAATGCAAATTCACGTGTGATAAACCCGGCAGACTCGCAGAGCATTCCAAAAATCATGCAGAAATATATGGTCGCATTTATTGTCCCGTCGAACATGATGTGCCCGATGAAGaacaaatcacaaaattgagAAAAGTTatagaaattgaaaaattaGCAAATCCCGAAAGTACCACAACCTCAAAAGATGAAGGCAATACGCAAGAAAAtggagaaataaaattattatatttttgtcaaaagtGTCCAGCAAGATTTTTTGATGACGTCCAACTCGAGGCTCATGAAAAATGTCATCAATCAAATCATGGTTTAACATTGCCCAACAAATGTAAAAGTTGTGACTTTTCGGTGACCGAAGATTTAGAATTAGCGGCACATTTTTCTGTCCACACAGATACatatcacacaaaaacaaagatGCTTAAATTTATTCACAACTCACATCGTTTACACAGGCCACCCGTGCTCGAGTTGGTTCACTGGCCAACGACTTCTGAGATTACGTGGGTAGCCACTGGGCCGAGCAAAGCTGAAAATATTGAAAGCCCTTTGAAAAAAACGAATGATTCAAAACACGtgccaaaacaatatttttgcagACAATGTCCAGCGAAGTTTTTCAAAGGTTCCGCGCTTTCCTACCACATGGGGCTGCATGGGGGTGAAGGCGAGCACAAGTGCAAAAAGTGCAACTACGCCGTGAAGAACATTGGGAATCTAGCCAAACATGAATTACTTCACGATAATGACAACAAGGGTACAAGTTGCGACTATGAATCCGGCGACGATatggattataaaaatattccattGTCAGGCACAGATTTGTTCCAGAGGAAGACTGAGGCTCAGAAAAGAGTTTTAACGGATAAAGATAAGTTAGTTAAGCCGAACGATCATTTTCCGCCTGTCCTACAAGCTGATCCCCAGTTCGGTTATCTAATGCACGGTAATCCGGAATTCATATATCCCACCTACTTGAAAAATGGTCGCCAAAAAGAAAAGCGATACAAATGCCACAAGTGTCCGTCAGCCTTTGAGAAAAGAGAACAATATAAGATTCATTTATCATTGCACGGCTCCAAGCAAAGATATAAATGTGAGTTGTGTGATTATTCAGTGAAATATTACGCCAATTACGTTCAACATATGCGAAAACATCAAATGAACGATGAAGCTCAAGCTGAAAGGAAAAAAGGTAATGATTTTACAGAATCAGAACATCAAGAAGACGTAAAGCAAGACGACAGCAGTGATAACattaaacttgcaataaaaacTATGCCAAAAGGAGCTGCTAAGAGTGACTTTCAACAATTCTCAATTAGCGACCAACAAACGCTCAGGCTGCTGCAGAGGAGACGGTCAATGAATAATTCTGGAAACCACAACACTTCTGAAACTTCGCCAATCAAAGAGCGCAAAATGCACATGTGTCTATTATGTCCCTACACTAATCAACGTCAAGATTCTTTAAGCAATCATTACAGGAGGCACGGTGACACCGATATCCTGAACGGAGGCAGTCATAAATGTTCTCATTGCGACCTAGTGGTTGTTCAGTCGCATTTCCTTCGGGAACATCTCAAGACACACTTCAACTACCACAAAACTCTTATTCCTGAATGTTTTGTGGCTAACGAAGCTGTTAGTTTTACTATAACCAAGTTGGATGAAGACGGTGAATCAGTTGATCTCAAATTAGACGTGCAGAACAAGAGTTATGCATGTAACGATGAaaagttatttgtgaaaattaaaactggaGAACTATtggtagaataa
Protein Sequence: MLQQMSSSPRAQVGEVATIVRHLEGRVCGDVSSEASSDAAEDFELPQCKIRRNYNCTKCTFYTQNPRAYLVHTRDAHFVRLKIYDCPHCVYASRHHQKLIRHVKMVHGGTKQTSATAKVEELSPPPNDNMEPAERIEDMLEEVEDCEEMMMEVDEDSMDQPDDVDGDGDQSVDFGSPYRRARLSKAKGKFFSCDKCNYVTHIRARFTKHVKYHSMPMIKCTMCDFRTPYKWNLDRHMKNHGGNGSFNCSMCNFTADIKQSLTVHEMNHHTPATGQSLPSRRRNRVGASDTVIAEYDAASALLPKEEEGSGDSRSSHSVSDMGLQYAERELVSCKSDSNDGTASDAITNRKETSQDGYNLSPTHSADEKLQKQCRKIPRPIPQLIPLNSSTPNQKQTCSGEPPQKKFKESLPDSDDVSAENTLLPANPSIKETAGRKKNESFFDRLKERLLTETGEEGSLICKICGFESKCLSEHSVHEKNCSPQTNRINANTSLKSLSSTRCQNCRHRCKSSADLYIHMQTCVKSDSADNETSIKIDSSNDGVIPIHETETEPHPMENVVFVWNNINHDPNKFDVPLDININDDSTLPEMHRGFDAEIVDDNESMNLSPSQAIGRKVFKCPHCPFFSTTASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPDHNEAKVLMTDETGRRNYSKYNKFLAMPVLNEHGENEFHYLDPNTAVDSTMEIDESFNEISDVMNVQFEMQPLNLQTQHIEDNYNFIDNRGLNDMKKPKKTLWKCKKCNYKDPSKEALLEHVREHSRSEGFHEEPNKPPIKKPENNTPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGVIKVITTVKPKPDPPMNINEINIDTCNKCPYRTSDKKLLIAHLQQHQPSPNSIFKCYFCPFFVKDEPELIQHLLLHGITDPEDYIAKAMGTKSPGPEPQVPATTSLNSTKRHKCIECPYETNSKSQFMYHEQFHRLPADTPYKCPECNYSVSKRHLLHQHLRVHGIATKRIETEAELEASTSTQNKMDKTDSHINLDEIPFVWVSAKNEFHKMYKCRYCSYVNAIKCKIPNHEKIHCIVLENNDTTIYKCLECKFTCDKPGRLAEHSKNHAEIYGRIYCPVEHDVPDEEQITKLRKVIEIEKLANPESTTTSKDEGNTQENGEIKLLYFCQKCPARFFDDVQLEAHEKCHQSNHGLTLPNKCKSCDFSVTEDLELAAHFSVHTDTYHTKTKMLKFIHNSHRLHRPPVLELVHWPTTSEITWVATGPSKAENIESPLKKTNDSKHVPKQYFCRQCPAKFFKGSALSYHMGLHGGEGEHKCKKCNYAVKNIGNLAKHELLHDNDNKGTSCDYESGDDMDYKNIPLSGTDLFQRKTEAQKRVLTDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERKKGNDFTESEHQEDVKQDDSSDNIKLAIKTMPKGAAKSDFQQFSISDQQTLRLLQRRRSMNNSGNHNTSETSPIKERKMHMCLLCPYTNQRQDSLSNHYRRHGDTDILNGGSHKCSHCDLVVVQSHFLREHLKTHFNYHKTLIPECFVANEAVSFTITKLDEDGESVDLKLDVQNKSYACNDEKLFVKIKTGELLVE*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01231174;
90% Identity: iTF_00953155;
80% Identity: -