Basic Information

Insect: Mamestra brassicae
Gene Symbol: -
Assembly: GCA_905163435.1
Location: LR991015.1:8391237-8436966[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 1.9 1.6e+02 3.8 0.6 2 23 490 511 489 511 0.89

2 18 0.0015 0.13 13.5 0.1 1 23 521 544 521 544 0.95

3 18 0.17 14 7.1 1.1 2 21 619 638 619 639 0.94

4 18 0.043 3.6 9.0 3.8 2 23 702 723 701 723 0.95

5 18 1.1 89 4.6 0.7 1 23 735 759 735 759 0.90

6 18 0.00016 0.013 16.6 0.3 2 23 766 789 765 789 0.97

7 18 0.26 22 6.5 0.4 1 23 795 817 795 817 0.93

8 18 0.0041 0.34 12.2 2.9 1 23 823 845 823 845 0.98

9 18 2 1.6e+02 3.7 0.3 2 20 881 899 881 901 0.88

10 18 0.088 7.3 8.0 0.2 1 23 980 1002 980 1002 0.96

11 18 2.5 2.1e+02 3.4 7.2 1 23 1009 1031 1009 1031 0.95

12 18 0.0017 0.14 13.4 1.8 1 23 1081 1104 1081 1104 0.95

13 18 0.00028 0.023 15.9 0.7 1 23 1111 1134 1111 1134 0.98

14 18 0.0046 0.38 12.0 0.2 2 23 1157 1179 1156 1179 0.96

15 18 0.0007 0.058 14.6 2.5 2 23 1204 1226 1204 1226 0.94

16 18 0.00018 0.015 16.4 1.3 1 23 1251 1273 1251 1273 0.97

17 18 0.00015 0.012 16.7 0.1 1 23 1279 1301 1279 1301 0.97

18 18 0.00046 0.039 15.2 0.7 3 23 1309 1330 1307 1330 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	1.9	1.6e+02	3.8	0.6	2	23	490	511	489	511	0.89
2	18	0.0015	0.13	13.5	0.1	1	23	521	544	521	544	0.95
3	18	0.17	14	7.1	1.1	2	21	619	638	619	639	0.94
4	18	0.043	3.6	9.0	3.8	2	23	702	723	701	723	0.95
5	18	1.1	89	4.6	0.7	1	23	735	759	735	759	0.90
6	18	0.00016	0.013	16.6	0.3	2	23	766	789	765	789	0.97
7	18	0.26	22	6.5	0.4	1	23	795	817	795	817	0.93
8	18	0.0041	0.34	12.2	2.9	1	23	823	845	823	845	0.98
9	18	2	1.6e+02	3.7	0.3	2	20	881	899	881	901	0.88
10	18	0.088	7.3	8.0	0.2	1	23	980	1002	980	1002	0.96
11	18	2.5	2.1e+02	3.4	7.2	1	23	1009	1031	1009	1031	0.95
12	18	0.0017	0.14	13.4	1.8	1	23	1081	1104	1081	1104	0.95
13	18	0.00028	0.023	15.9	0.7	1	23	1111	1134	1111	1134	0.98
14	18	0.0046	0.38	12.0	0.2	2	23	1157	1179	1156	1179	0.96
15	18	0.0007	0.058	14.6	2.5	2	23	1204	1226	1204	1226	0.94
16	18	0.00018	0.015	16.4	1.3	1	23	1251	1273	1251	1273	0.97
17	18	0.00015	0.012	16.7	0.1	1	23	1279	1301	1279	1301	0.97
18	18	0.00046	0.039	15.2	0.7	3	23	1309	1330	1307	1330	0.95

Sequence Information

Coding Sequence: ATGACAGAGCCACAGCCACCCCTGATCCTCTGCATGGAGAATGCTACAGGCGAGGAAGTGTCGCTCAGGGTAGAACCCGATGATAGCTTCCAGATGTTTCTTGATAAGGCCAAGTCACTCCTAGGCTATGACGTAGACATAAACTCTATAACGAGAAACCAGCCCGTTGCCCTATCAGAAAACGTATACCAATTTCTAGTTAGCACCGAACAAAACTTACAGGCTGACGAGCTAACACAAAACTTTGATCAAATGCTGGGCACCAACGATGGAGCCAATGATTTGGTCTACATACTGGACGATGGCACACAAATCCGCGCCTCTCAAATACACTTCGACAATGATGATCCTTTGGTTGATCTAACAGCTGAGAAAATACCTTTTGTGAAATACGCTGACGATGTCACTGACATAGATTTTGACGATACGAGCATTCAAGAAACTAAAAAGATTAACATCGTTGAAAGTCCCGTCTCGAGATGGTCAAGCAAAAACTCCAGTCCAAAATGCAGTTTCGTCAACTCTCTACCGTTCAAACTCGTATGCAATAACACGTCAGGTTTCGAAGCTCAATTCACGAAATATTTAGAAGCAAATACAACGAAAACGTACGCGACTTTGAACCCTGTGACAACTCGGAATAAATCTCCCAAAAGTTTGATCAAAGATAATTTTAAGAACTATGATGATAGTTATCAGAGAAATGATAACTTATCTTACACGAGAGAAGAGATTTTGAACATGTTCAAAGACTCCCCGATGACATCATTGCCTTATGATCAGGGTTATAGTGAGAGAAGACATGTTAGGAAGACAGACCCCTCGAGACTTGTTCACAAGACGTGGAGTAAGCCTCTTTCTTACGTAGATATTGACGGAGTGTTGATAGGGGAGAGTGAGAgtcaaatatgttttatttgcgGGAAAAATGTGGATAATAATGTTGATAAACTGTACCTCTTTGATAATGAAGACCAGAGGTTGTATAGATGTTCCCCGCAGAAGAAAATGTCGACTCAACTGAAAATTATTTGCGAATGTTGTCTCAACGAAAACTTTACGCCCTGCCGAATGAAAAGCGCCAATCAATTCTTAAACCCCGATGAATATCTCGTGATAAGAAACAACCAGCAATACAtctttcaaaaagttaaaaacttcAATTTCGCGCACCTGGGCAAAGCTAAAGATATCATAAACAAGATAGAAAAGAGAACAGACAAAGAAGAGTTTGTTAAAGTAGAAATAGGTTCTGACGGAGAGATTATTACCAAACCCATAGACAATCGTTCTGATGACGTCGTTATTGTTAAAGATGAGAAAAAAGATGGTAGTTCGAGTGACGTGGAGATTGTCGAGCCGGAACCGGAAATAGATCATATCATAGACAATTTGGAGGAAGCTGATGAGGAGGTGAAAGAGTTTTTGGGGAAATACCAGCGGAATGATAGTGAAATTACCGAGTTGAAATGCAGATTCTGTGAACAAGTCTTCCCGGACCTGGCGGCGGTGACTGATCATTGTGAGACTCACAAACATGACCTAGAAGATGGCGAAGTGTTTCCGTGTCCTCTCTGCAACTATGGTTATGCAAATTTGAAATACCTGAAAGCCCATGTGAAGGCGGCCCACGAGAAGAGTGAAACTTCTGAATTATTAAAAGAAGACAACGTGCCTGTCAAAGAGGAGAATAAAGGTACGATGGAGGTAAAGCAAGAATGCCTGGACAGCAGTGAGGATGAGATCTGGATCGTTCAGACCGCTGATGCTGAAGCCACTCAAGAGCTGCAGAAACTACTTTGTAGTGCCAAAGTTAAAGAAGGCGGCCAGGATGGCGCATCTGAAAAGACACCCAAATGTTTTAATTGCAGCCAAATATTCGCGAACGCGGATGGCCTGTCAAACCATCGTTGTAGAAGACGCACCCGCAAGCGGAAATCCAAAGACTTGGGCAACCTCATATGTATACCGACCGAAGAAGACTTTCTGAAGaGAGCCCAGGGACGTCCCCGACCAGCTGAAACGTCCATAGACAATGATCTTCTTGTTATGCGTCCCCGAAAACGTCGCAGCCGGGAACCGACCTCGAATCCTCAGGTGGTAACCTGCCACAACTGTAACGAATCCTTCACTTCTAAAGTTCGACTCAAGTTTCATATGCAGTTCCACGAAACATCGAATCAAGCGCGCACAGACGGGCGCTACTCATGTTCGGAGTGTGACGACGCCACCTTCCCCACGGAGACTGAACTCTTCGACCACGTGCACTTCCAACACGACAAGCAGAAGAGGTGGCAGTGTCCCGTCGAGGGGTGCGGGAAGACCTTCTTTCTCAGAGCTACCCTCACAAAACACAGCCGCACGCACACAGACACGCGGAGATACGTATGTGTGACTTGCAACAAGAGGTTCCTGGACAAACAGACGCTGGATGAACATGGAGTCACGCATTTACAGATCAAACCCTTCCAATGTCACATCTGCCTGAAGCAGCTGACCCGTCGCTCGCGCTTGCGAATGCACGTCCGCGCGCATGAAGAGGAGCTGGCGCCACGGCTCGTGCGCGTCTGTGCGGTCTGCACGAGGGCGTTCAGAGACCATCTGCATGCACAGGAGGAGCTGGCGCCGCGGCTCGTGCGCGTCTGTGCGGTCTGCACGAGGGCGTTCAGAGACCATCTGCATGCACAGGAACATGTATCAAAATCGACGGAATGCATCGAAGCATTCGCAAACGAGTTGAAAGAAGAGGCAGAAGAGGTATCAGTACAGTTGTCTCCTACCAGTGGACTCGTAAGACATACGGTGCAGATCGTTGAATCCCCGAAACTATCAAAACCGATAAAACGGCAAGTTTCAAACGAAGTAGGAGAGCCGCTCCTGTCGCAGCTCGCGGATGAAGCGCGCGCTTTGATCAGAGTCGTCGAGATCGAGAAAGCATTTCGCTGCGAGTACTGTGAAGATGTGTTTTACTTGGAAAGCGGTCTGAACACGCACCGTGTGATACACAAAGGAGTGAAGAATCCTTTCACCTGCCACATCTGTAAAGTTAGCTTCGCTACCTATTCCAGATGCACAACCCATAAAACAACCCACGGCTTCTACAAACGCTCATTAGCCGACGCTAAAAAACAAGCCGACGCCAAGAAACAGGCCGACGGTCAACTACAAGCGGACACCGACAGCTCTGCCCGCTCTGCCGCCGGCATACTGGGATACGGCGACTTTCCCGTCGTCAAACACTTCCTGTGCGAGGACTGCGGTCGCTCGTACCTGCACTGGACGTACCTACAAGTACACAGACGTATGAAGCACGCCAACGAAAACTTTCTATACAAATGTAACCAGTGCGAGCTTACCTTTCCTAAcagTTGGAGCCTGGCGTACCATCGTAAGAAGGTTCATGGTAAGAATGGAGCCGACGACCCTGGAACAGCCACCAACAAGAGCAACCGAGAAGATTACAGaataccATGTCGGGATTGCGACGAGGTGCTGCCGAATAAGACAGCTTTGTACAAGCATCGCAAGAAGGAGCACAGCGATGGAACAACACGGTCTTATACTAAACCAGGCATGTACCCGAACGCAGAGTCAGAATCTACGGGCGGGGAGTGTCCTCACTGTCCCGCTACGTTCACGCACGCGACCGACCTGCACAAACATGTCAAAGACATCCATAGCAAAGATGACGACTCCTGCGCATCCTGCAACAAGACGTCCGCCTCGGACGCATCGTGTCCGCGCCGCCCGCACGTGTGCCCCGTCTGCGGGCACGCCTTCCGCACGCTGTCCATGCGCAACGAGCACCTGCGCGTGCACACCGGCGAGCGACCCTTCCCCTGTGACGTGTGCGGAGTGGCCTTCAGGAGGTCGACAGCTATGCGCAACCACCGCCTGATCCACACGGGGGTGCGCGCCTGGGCGTGTGGGCGCTGTCCCAAGCGCTTCCGTATCCGCTCCGACCTGCGCACGCATTTGCGCCTCAAGCATCCTGCCACCATTGTAATAGTAGAGATGGAAGGCCTGAACCCTTCGTCTGATGAAGTCCTGAAGGCGCTCACTGCACAAAATGTTCCCCACGACAAGCTTATAGATATCACCAAGATGTCTTTTACAAAGGGCTCGACGAGCGTGATCCCGACGTGTGCGCGCGCGCTGTCAGCGCTCAACAACGTGCCGCGCACGCACGTGGCGTGCATCAAGCCCACCCCCGCACTGGAAGAGTTGCCGGCTCGTCGAGGCCGCGGCATCGCCAAGAACCCGCGCCGCCCCAAGATACTGCAGCGCGGGGACCTGGACGCACACCACCacacggattaccctatcgatgGCGCCGAGGAGCTCTCCGACATCAACGTGCAACTCTTACTTCGGGATGGTGTCCTGGTCAACGGCAATCAGATGGTACAACTACAGTTAGATGACCCTATAATGATGGAGTAA
Protein Sequence: MTEPQPPLILCMENATGEEVSLRVEPDDSFQMFLDKAKSLLGYDVDINSITRNQPVALSENVYQFLVSTEQNLQADELTQNFDQMLGTNDGANDLVYILDDGTQIRASQIHFDNDDPLVDLTAEKIPFVKYADDVTDIDFDDTSIQETKKINIVESPVSRWSSKNSSPKCSFVNSLPFKLVCNNTSGFEAQFTKYLEANTTKTYATLNPVTTRNKSPKSLIKDNFKNYDDSYQRNDNLSYTREEILNMFKDSPMTSLPYDQGYSERRHVRKTDPSRLVHKTWSKPLSYVDIDGVLIGESESQICFICGKNVDNNVDKLYLFDNEDQRLYRCSPQKKMSTQLKIICECCLNENFTPCRMKSANQFLNPDEYLVIRNNQQYIFQKVKNFNFAHLGKAKDIINKIEKRTDKEEFVKVEIGSDGEIITKPIDNRSDDVVIVKDEKKDGSSSDVEIVEPEPEIDHIIDNLEEADEEVKEFLGKYQRNDSEITELKCRFCEQVFPDLAAVTDHCETHKHDLEDGEVFPCPLCNYGYANLKYLKAHVKAAHEKSETSELLKEDNVPVKEENKGTMEVKQECLDSSEDEIWIVQTADAEATQELQKLLCSAKVKEGGQDGASEKTPKCFNCSQIFANADGLSNHRCRRRTRKRKSKDLGNLICIPTEEDFLKRAQGRPRPAETSIDNDLLVMRPRKRRSREPTSNPQVVTCHNCNESFTSKVRLKFHMQFHETSNQARTDGRYSCSECDDATFPTETELFDHVHFQHDKQKRWQCPVEGCGKTFFLRATLTKHSRTHTDTRRYVCVTCNKRFLDKQTLDEHGVTHLQIKPFQCHICLKQLTRRSRLRMHVRAHEEELAPRLVRVCAVCTRAFRDHLHAQEELAPRLVRVCAVCTRAFRDHLHAQEHVSKSTECIEAFANELKEEAEEVSVQLSPTSGLVRHTVQIVESPKLSKPIKRQVSNEVGEPLLSQLADEARALIRVVEIEKAFRCEYCEDVFYLESGLNTHRVIHKGVKNPFTCHICKVSFATYSRCTTHKTTHGFYKRSLADAKKQADAKKQADGQLQADTDSSARSAAGILGYGDFPVVKHFLCEDCGRSYLHWTYLQVHRRMKHANENFLYKCNQCELTFPNSWSLAYHRKKVHGKNGADDPGTATNKSNREDYRIPCRDCDEVLPNKTALYKHRKKEHSDGTTRSYTKPGMYPNAESESTGGECPHCPATFTHATDLHKHVKDIHSKDDDSCASCNKTSASDASCPRRPHVCPVCGHAFRTLSMRNEHLRVHTGERPFPCDVCGVAFRRSTAMRNHRLIHTGVRAWACGRCPKRFRIRSDLRTHLRLKHPATIVIVEMEGLNPSSDEVLKALTAQNVPHDKLIDITKMSFTKGSTSVIPTCARALSALNNVPRTHVACIKPTPALEELPARRGRGIAKNPRRPKILQRGDLDAHHHTDYPIDGAEELSDINVQLLLRDGVLVNGNQMVQLQLDDPIMME*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00121732;
90% Identity: iTF_00952937; iTF_00851163;
80% Identity: -