Basic Information

Gene Symbol
lilli
Assembly
GCA_963924605.1
Location
OZ004604.1:17140336-17157518[+]

Transcription Factor Domain

TF Family
AF-4
Domain
AF-4 domain
PFAM
PF05110
TF Group
Unclassified Structure
Description
This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 0.0006 15 5.1 0.2 44 130 12 103 8 164 0.60
2 6 1.8e-13 4.7e-09 36.5 25.6 336 512 185 377 142 379 0.58
3 6 1 2.5e+04 -7.9 18.4 130 240 384 485 363 501 0.32
4 6 0.039 9.9e+02 -0.8 1.8 442 472 487 517 474 521 0.80
5 6 1 2.5e+04 -12.2 28.8 74 246 616 782 588 804 0.38
6 6 0.0013 32 4.1 22.9 63 250 876 1057 869 1129 0.55

Sequence Information

Coding Sequence
ATGTTGTGTAAACTtaTAAATCCATCTTCAGCTGACCGCGTAACGTTACAAATCCAAAGCAAACTGGGTGATTATCAGCGGGTGAAACCATTTCTGGACGATTCGAAACGGTTAATTGGAGTGGACGGCGTACCTCCGAGTCCCGGAGGACCTCTGTTATCGGCACCTCTGGCACCAACGTCGTCGTCTCGATTACCAACTGCGGTCGTCTTACCATCGCGAGTCCATCCTCCTGCCGAATCGAGACTGGAATTTAAAAAGCCACCTCAGAGCAGAACGACAACATCCCAACACCATTCTTATCAACGTCGAGATTTTGTTAAACCAACCGATGGGAAACCTTCGTACGAAGGTCGTGGCGGATATCCGGGGCAACCAATAAAACCGGTGAGCTCGATAAATAATCATCGTTCAAATGGTATCGCCCCAATCAAACAGCCTCCGCAACAATCATCTTCAGCTataaacaacaacaacaacagttCCACTACGAGAATTCACAACGCCTCGCGTCATTTGCCTCGAATTTCTGTCGATCAgAGTGGCGTCGCGGTCCCTAGAGAATCTTCAACTCCTAGTGGAACTCAAGAAGTTGAAAACATCTTGAAGGAAATGATAGAAGTTAGAACACCTTTGACGGCGATCGCAGCAACTCCACGTAAAGAGCCCGAAACAAAATTTACATTCAATTCTGTCTTACCAAAGGTAAGTGTTGTATTTTTATCATTATGCAAAGTTTATACCGTTAAAAGGCCACATAACGATTTGCGAGATGATCTCAAAATATCGGATTCTGACGACAGCGACGTTGAACAACATAAGAAATCGCCATTATTACCACAATCGGCTTCCAAGTTACCAGTAGAAagATTGATCTCACCGATCGGAAGGACGCCAGCAAGTTCAGCAATGGAACGACCATCCGAAAAGCCAATTACATCACCAGTAGCGAGTTCTTCGAGCGATTCCGGTTCAGATTCTGGTTCGGACAGTGATTCTAGTAGCGACGATTCGACGGAAGAACGCGTAACGTCGGCGGTACCGCCAGTTTCGCCCGAACCGCAAAATCCTCCTCAAGTTTCGCCCAAACCCGAAGAAGAGACCAAACCTCGTTGGAATTTAGCTTCGTATTTAGATCAAAACGGTGTTAAAACGGAACAAGCTCAATCTCCTCGTGCTAAATCACCTCGTAATTCGACGTCTAACAGCTTGACTTTAAATTCTAAAAGTGTTAACGATATTAGGCAGAAATCTAGTGACGAATCGGACTCTAGCGATTCGACTAAATATTTAGACAGTGTAGTAGCTGAAGCTTTTGCTTCAAAACCTTCCGTTCCTCTTCTTTCCAGTTTATCTGATTCTGATAGTAGTAGTAAACGAAAAAGTCCTAAACGAAGAAAGAAACCATTACATTCAGTTACCAAAAACGTTTCGGATAGTGATAGTGACGATGACGTACGAACTAATATTAAAGTTACTAAACCTACAAATCGCGTAAGTCCCAGGCCTAAATCGGTCGATTCGCGCAGCGAATCAGATGTAGACTCGAGTCATTTCGTTAATAAATCGCGTTTATCTTTGCCAAATCAAAAAAGGCCAGATCTAGATAAGCCTAAATCAAATAGAGGTAGGCCGAGAAAAATCAAACCATCACATAGCGGTTCCGATACCGAAGTTAAGATTAAAAAGAGAGGTCGTCCACCCGGTAGTACAAGCACTAATAAAAATCGTTCTTTGAGCAGATCTGATAACGAAGCGCCTAAAAAGAGAGGCAGACCTCCGTTGAAATCGAAACGTCCACCTTCGCCTAGTAGTTCAGAAGACGAACGCAAACCGTCAGTTTTCGACAAACCGGCACCTCCTAATAGAAGAAGAACCATCTCAAAAAGAGATTATTCTGATTCCGACACGGACAAATCGCACAAAACGACAAATTCGGATCGCGACTTAAAACGAAGCGATTTAACAAAACACAAATACAACAAAGTAACCAAAAGTGACGAAAAAGAGAGatttaaaaagacgaaaaatgaTTCCGAAAATGACGAGTGGggtaaaatgaacaaaaatagAATAAGAAATCATTTGTTTGAAAGAAGTCAAGAAGACGTAAGTCTCaagcaaaataaacaaaagagaAGTAGCGAATCGCCAAAGAAGAAAGAAACGGCAGCTTCTTTTAGAAGAAAAGGCATTTCTAATTTGAACGTCAAGAGCTCACCTTACATTGCTACAACTGACTCCGATAGCGATTCAGATAATAAGCAGGCTGTGAAAAAACTATCTTTGGATGGTAAGAAGCGCAATCGAAGTCAGTCTTCTTCCGATAGCGATATTAACGATCGATTTTCTGACATCGATCGGACGGCGAGTTCGGCTTTGGTTAATAAAGTCGAGAGTCCGGTTAAAGTTGAATCGGGTGGAAAAGCTGTGCAAGATAAGAAAAAGAGTGATACTTTAAGGAAGTTGTTTACGCCTAAGAGAGATTCGGAAGGTGGTAAAGGAGGAGGTAAAGGTGGAGGAAAAGGTGGTAAAGGAGGTAAAGGTAAAGGAGGCGTTAATGTTATCATTGTCGACGGTGATTACGAACGATCGAGTTCTTCTGTGGATGACGAAGTTTTGCCGACCATACCAACAAGTAGTGCGCCTAAAGATTTACGTGTTGTATCGTCAAATGTTTCTCCGATTAAACGTCGTAAGAACGGATCGACTTTCAGCGAGACGCTCAaaacaaaaactgaaaaaccTTCATTAAAAGTGCGATTAGATATAAGTAACGTTGATTTTGGCAAGTTAAAAAACATACCAAAGTTAAACAAAGTGCAACAACAACGTTTAAGTGCAGCTGCCGAAACAAAACAGTtagaaacaaaagtaaaaatcgAACCTAAAGaagaagttaaaattaaaagcgAAAGAACAAATTTAAACGATAGTGATAGTGAAGTcgataaaaaatcaataaattggaAAAGTGAAAAGGATGTGGACAATTCTAAATCTGTTAATCACAAACGTAAAAGACGTAATAGTTGTAGTAGTTCCGTTTCTTCGTTATCCACCGTTAGTAGTTTATCGCATAATAGTAGAAGAAAAGAGCATAGGAAAGATAAAGAAGACCATCACAAAAGTAAGAGGCGAAAAGATAAAACCGAGTCGACTCAGAGATCTtatataaattcaaataatttaaccaACGCTCCACCGACTAACCACGAGAGGGAAGTAGCGAGGATACCACCTATTCCTTCACCTGCTGAACGTAATTCAACTTGGTCTCAACCTATTAGGGAATATCATTCTTATTTTGAGAAAAGCGATGAACTCTCGGAAGAACAAGAACGTGACCAAAATAAGTACCTTACCGAAGCGAAACGTCTAAAACATTTAGCCGACAAAGAGACTGATACAATTAAACAAGGTATGCTTTACATGGAGGCTGCTCTTTATTTTCTCCTAACTGGAAATGCGATGGAACTTGAAAGTTCAGAAAAACCCGCTTTTACAATGTTTAAGGACACCCTCAGCCTTATCAAGTACATCTCATCCAAGTTTCGAGGAGAACAAAACAATTGTTCGTCTCTTCACGCCAAACTAGCAGTTTTAAGTTACCGATGTCAAGCTCTGTTGTATTACAAGCTGTTTAAAATGCGAAGACCCGAATTAAAAGACAGCCACAAACTCGTCAACGAGTTTTGCACAAAGTCTGCTAATGTAGCACCAATACAATCGGACCAAATAAACCACGCTGTTGGCGGCCAAGGAACGCCTTGCCCATTATCGCCGACACCATCACCTGCAGGATCCGTGGGTTCCGTTGGAAGTCAGTCTTCTGGTTATAGTAGCGGCGAATTGGCGATTAGAGGCAATTCGGCTACGCCATCCACGTCAACGACGTCAGCTCCGAATCCTTGCATGTTGATGCCACTTCCTGTATATCACGCAGTAACAAAACTTAATCAAAATTACCTATATTTATTTTCCTATCAAGATTTGTGGGATCAAGCCGATTCTTTGGTTATGAAAGGCAATCATAAAgagTTTTTTATTGAGTTGGATAAGGAATACAAACCGCTCACCTTACATAGTTCTTTAATAGAGCTAGTAAAATATGTTCGTAATGGAATAACGAGActtaaagaaaaaatgtaa
Protein Sequence
MLCKLINPSSADRVTLQIQSKLGDYQRVKPFLDDSKRLIGVDGVPPSPGGPLLSAPLAPTSSSRLPTAVVLPSRVHPPAESRLEFKKPPQSRTTTSQHHSYQRRDFVKPTDGKPSYEGRGGYPGQPIKPVSSINNHRSNGIAPIKQPPQQSSSAINNNNNSSTTRIHNASRHLPRISVDQSGVAVPRESSTPSGTQEVENILKEMIEVRTPLTAIAATPRKEPETKFTFNSVLPKVSVVFLSLCKVYTVKRPHNDLRDDLKISDSDDSDVEQHKKSPLLPQSASKLPVERLISPIGRTPASSAMERPSEKPITSPVASSSSDSGSDSGSDSDSSSDDSTEERVTSAVPPVSPEPQNPPQVSPKPEEETKPRWNLASYLDQNGVKTEQAQSPRAKSPRNSTSNSLTLNSKSVNDIRQKSSDESDSSDSTKYLDSVVAEAFASKPSVPLLSSLSDSDSSSKRKSPKRRKKPLHSVTKNVSDSDSDDDVRTNIKVTKPTNRVSPRPKSVDSRSESDVDSSHFVNKSRLSLPNQKRPDLDKPKSNRGRPRKIKPSHSGSDTEVKIKKRGRPPGSTSTNKNRSLSRSDNEAPKKRGRPPLKSKRPPSPSSSEDERKPSVFDKPAPPNRRRTISKRDYSDSDTDKSHKTTNSDRDLKRSDLTKHKYNKVTKSDEKERFKKTKNDSENDEWGKMNKNRIRNHLFERSQEDVSLKQNKQKRSSESPKKKETAASFRRKGISNLNVKSSPYIATTDSDSDSDNKQAVKKLSLDGKKRNRSQSSSDSDINDRFSDIDRTASSALVNKVESPVKVESGGKAVQDKKKSDTLRKLFTPKRDSEGGKGGGKGGGKGGKGGKGKGGVNVIIVDGDYERSSSSVDDEVLPTIPTSSAPKDLRVVSSNVSPIKRRKNGSTFSETLKTKTEKPSLKVRLDISNVDFGKLKNIPKLNKVQQQRLSAAAETKQLETKVKIEPKEEVKIKSERTNLNDSDSEVDKKSINWKSEKDVDNSKSVNHKRKRRNSCSSSVSSLSTVSSLSHNSRRKEHRKDKEDHHKSKRRKDKTESTQRSYINSNNLTNAPPTNHEREVARIPPIPSPAERNSTWSQPIREYHSYFEKSDELSEEQERDQNKYLTEAKRLKHLADKETDTIKQGMLYMEAALYFLLTGNAMELESSEKPAFTMFKDTLSLIKYISSKFRGEQNNCSSLHAKLAVLSYRCQALLYYKLFKMRRPELKDSHKLVNEFCTKSANVAPIQSDQINHAVGGQGTPCPLSPTPSPAGSVGSVGSQSSGYSSGELAIRGNSATPSTSTTSAPNPCMLMPLPVYHAVTKLNQNYLYLFSYQDLWDQADSLVMKGNHKEFFIELDKEYKPLTLHSSLIELVKYVRNGITRLKEKM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00949869;
90% Identity
-
80% Identity
-