Basic Information

Gene Symbol
lilli
Assembly
GCA_950108345.1
Location
OX467289.1:2142806-2164113[-]

Transcription Factor Domain

TF Family
AF-4
Domain
AF-4 domain
PFAM
PF05110
TF Group
Unclassified Structure
Description
This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 5.8e-07 0.012 15.1 3.7 18 146 4 128 2 202 0.50
2 6 1.1e-12 2.2e-08 34.0 36.0 336 510 213 415 175 419 0.58
3 6 1 2.1e+04 -15.0 28.1 139 250 428 533 395 587 0.40
4 6 1 2.1e+04 -21.2 30.0 109 226 566 681 480 719 0.36
5 6 1 2.1e+04 -10.1 27.7 84 245 663 819 634 853 0.39
6 6 0.0027 55 3.0 23.3 81 253 916 1102 898 1131 0.50

Sequence Information

Coding Sequence
ATGTCCTCTCAAGTGGCCGACAGAGATAGAGAACAGGAGGTACCCGGAGCTCCATTATTCACCTCTCCGGTCAAAATAAATCCATCTTCGGCGGACCGAGTAACGTTACAAATCCAAAGCAAATTGGGCGATTATCAGAGGGTGAAGCCATTTCTGGACGACTCAAAACGATTAATCGGAGTAGACGGCGTACCTCCGAGTCCCGGAGGACCTCTGTTATCGTCGGCACCGCTGGCACCAACTTCGTCGACTCGATTACCAACTGCAGTGGTCTTACCGTCGCGAGTTCATCCTCCGGCCGATTCGAGGTTGGAATTTAAGAAGCCATCTCAAAGTAACAGTAGAACGACaacatcatcatcatcatcatcccAACACCATCCTTATCAACGTAGAGATTTTGTTAAACCAACCGATGGGAAACCTTCGTACGAAGGTCGTGGCGGATATCCGGGACAACCAATAAAACCGACGAACTCGATAAATAATCATCGTTCGAATGGAATCGTCCCGATCAAACAGCCTCCGCCGCAATCGTCTTCATCTGTAAACAACAACAACAGCAGTTCAACAACAAGAATTCACAACGCCTCGCGTCACTTGCCTCGAATTTCCGTCGATCAGAGTGGCGTTGCGGTCCCTAGGGAACCTTCGGCTTCTAGTGGAACTCAAGAAGTTGAAAACATCTTGAAGgAAATGATAGAAGTGAGAACACCCTTGACAGCAATAGCAGCCACTCCGCGTAAAGAGcccgaaacaaaatttacgtttaattCTGTCTTACCAAAGTTGACTGAGGCGCCTCAATCGCCATCACCATTAGAGTCAGCGTCGCTAAAGAAACATGAGCAACGCCAATCGATTCAACGTGCATCAACcGATTTGCGAGATGATCTCAAAATATCGGATTCAGACGACAGCGACGTTGAACAACATAAGAAATCGCCATTATTACCACAATCGGCTTCCAAGTTACCAGTAGAAAGATTGATCTCACCGATTGGAAGGACTCCAGCTAGTTCGGCAATGGAACGACCGTCCGAGAAGCAAATTTTGTCTCCGGTGGCGAGTTCTTCGAGCGATTCCGGCTCAGATTCCGGCTCCGACAGCGATTCTAGTAGCGACGATTCTGCGGAAGAGCGCGTGACGTCGGCGAGACGGCCAGTTTCGCCGGAACCATCACAAAACCCACCTCAAGTTTCGCCCAAACCGGAAGAAGAGACCAAACCTCGTTGGAACTTGGCCTCGTATTTAGATCAAAACGGCGTCAAAACCGAACAACTTCATTCTCCGCGTGCTAAATCGCCTCGTAATTCGACGTCCAACATCCTGCCCATAAATTCTAAAAGTTCTAACGATAGTAGGCGGAAATCTAGTGACGAATCGGACTCTAGCGATTCGACTAAAGATTTAGACAGTGTAGTGGCAGAAGCCTTTGCTTCCAAACCTTCCGTTCCTCTTCTTTCCAGTTTGTCCGATTCGGATAGTAGTAGTAAACGAAAAAGTCCTAAACGAAGAAAGAAACCCTTACATTCAGTTACCAAAAACGTTTCGGATAGTGATAGTGACGACGACGTGCGAACTAAAACTAAAGTTACTAAGCCCACAAATCGCGTAAGTCCCAGGCCTAAATCGGTAGATTCGCACAGCGATTCTGATATAGACTCTAatcgttttattaataaatcgcGTTTATCTTTGCCAAATCAAAAAAGGCCAGACCTAGATAAGCCTAAAACCAATAGGGGTAGACCGAGAAAGATCAAACAATCACGTAGCGGCTCCGATAccgaagttaaaattaaaaagagagGCCGTCCGCCCGGTAGTAGTACCAAAAATCGTTCCTTGAGCGGATCCGAAAACGAGGCGCCCAAGAAGAGAGGCAGACCCCCGTTAAAGTCGAAACGTCCACCGTCGCCTAGTAGTTCCGAAGACGAACGCAAACCGTCAGTTTTCGACAAACCTGCACCTCCTAGGAGACGAACCATCTCCAAAAGAGATTCGGATTCGGATACAGACAACAAATCGCACAAAACGACGAGCTTGGATCGAGATTTGAAGCGAAGCAATTTGACGAAACACAAACATAATAAACCGGCTAAAAGCGAAGAAAAAGATAGGTATATAAAGACGAAGAATGATTCGGAGAACGACGAGTGGGGGAAGATGAACAAAAATAGAATTAGGAATCATTTGTTCGAAAGAAGTCAGGAGGAGATAAGTTTAAAGCAAAATCAACAGAAAAGAAGTAGCGATTCGCCAAAGAAGAAAGAAACCGCCGCTTCTTTTAGAAGAAAAGGCATTTCCAATACGAACGCTAAGAGCTCACCTTATGTTGCCACGTCGACCGACTCCGATAGCGACTTAGATAATAAGCAGGCTGTGAAAAAACTATCTTTGGATGCTACTAAACGTAATCGAAGTCGATCTTCTTCGGACAGTGATATTAACGATCGGTTTTCCGATGTGGATCGGATGTCGAATTTGATTTCGGCCGCAAAAGTCGAAAGTCCGGTTAAGGTCGAATCTGGCGGAAAGGCTGTGCAGGATAAGAAGAAGAGCGACACTTTACGCAAGTTATTTACGCCTAAGAGAGATTCAGAAGGCGGTAAAGGAGGCGGTAAGGGTGGCGGAAAGGGCGGTAAAGGAGGTAAAGGTAAGGGAGGCGTTAATGTCATCATCGTCGATGGCGATTACGAGAGGAGTAGTTCATCCGTGGACGACGAAATTCTACCTAGAATTCCAACAATTAGTGGTTCTAAAGACGCGCGTGTGCAATCGTCGAACGCTTCGGTTAAACGCCATAAAAACGGAACGACTTTCAGCGAAAcgctcaaattaaaaagtgagAAGCCTTCGTTAAAAGTGCGCTTAAATCTAAGTAACGTGGATtgtggtaaattaaaaaacgcgCCGAAATTAAACAAGGTGCAACAACAACATTTAAGTGTAGCCGCCGAAACAAAACagttagaaacaaaaaaaataaaaatcgaaccAAAAGAAgaagtgaaaattaaaagcgAACGAACAAATTTAAACGATAGCGATAGTGAGGCggataaaaaaacgaattggAAAAGTGAAAAAGATCCGGATAATCCAAAAGTTGTTAATCATAAACGTAAAAGACTTAATAGTTGTAGTAGTTCTATTTCTTCCTTATCTACTGTAAGTAGCCTATCGCATACTAGCAGAAGAAAAGAACATAGGAAAGATAAAGAAGATCATCACAAAAGTAAGAGACGGAAAGATAAGTCGGAAGCGACTCAGAGATCTCAcgtaaattcaaataacttaACCGACGCACCGCCAACTAACCACGAGAGGGAAGTAGCAAGAATACCGCCCATTCCTTCGCCCGCCGAACGCAATTCTACTTGGTCTCAGCCCATCAGGGAATATCATTCTTATTTTGAAAAGAGCGACGAGCCCTCGGAAGATCAAGAGCGtgaCCAAAATAAGTACCTTACCGAAGCGAAACGTCTAAAACATTTAGCCGACAAAGAGACTGATACAATTAAACAAGGCATGCTTTATATGGAGGCTGTTCTTTATTTTCTCCTAACCGGAAATGTGATGGAACAAGAAAGTTCAGAAAAACCGGCTTTTACAATGTTCAAGGACACCCTCAGCCTTATTAAGTACATTTCATCCAAGTTTCGAGGAGAACAAAGCAACTGCTCGTCTCTTCACGCCAAACTAGCAGTtttaagttaTCGATGCCAAGCCTTGTTGTACTACAAGCTGTTTAAAATGAGAAGACCCGAGTTAAAAGACAACCACAAACTCGTCAACGAGTTTTGCTCAAAGTCTGCCAATATAGCACCAATACAATCGGACCAAATAAATCACACACTCGGAGGACAAGGAACGCCTTGTCCATTATCGCCGACACCATCGCCCGCTGGATCCGTTGGTTCTGTCGGAAGCCAATCGTCCGGTTATAGTAGCGGCGAGTTGGCTATGAGAGGCAATTCGGCCACGCCATCGACGTCGACGGCAAATCCTTGCATGTTGATGCCTCTTCCCGTTTATCATGCAGTGACGaaacttaatcaaaattaCCTATATTTATTTTCCTATCAGGATTTGTGGGATCAAGCCGATTCTTTGGTTATGAAAGGCAAACATAAagatttttttatCGAGTTGGACAAGCAATACAAACCGCTCACCTTACATAGCTCCTTAATAGAGCTAGTCAAATACGTTCGTAATGGAATAACGAGACTTAAagagaaaatgtaa
Protein Sequence
MSSQVADRDREQEVPGAPLFTSPVKINPSSADRVTLQIQSKLGDYQRVKPFLDDSKRLIGVDGVPPSPGGPLLSSAPLAPTSSTRLPTAVVLPSRVHPPADSRLEFKKPSQSNSRTTTSSSSSSQHHPYQRRDFVKPTDGKPSYEGRGGYPGQPIKPTNSINNHRSNGIVPIKQPPPQSSSSVNNNNSSSTTRIHNASRHLPRISVDQSGVAVPREPSASSGTQEVENILKEMIEVRTPLTAIAATPRKEPETKFTFNSVLPKLTEAPQSPSPLESASLKKHEQRQSIQRASTDLRDDLKISDSDDSDVEQHKKSPLLPQSASKLPVERLISPIGRTPASSAMERPSEKQILSPVASSSSDSGSDSGSDSDSSSDDSAEERVTSARRPVSPEPSQNPPQVSPKPEEETKPRWNLASYLDQNGVKTEQLHSPRAKSPRNSTSNILPINSKSSNDSRRKSSDESDSSDSTKDLDSVVAEAFASKPSVPLLSSLSDSDSSSKRKSPKRRKKPLHSVTKNVSDSDSDDDVRTKTKVTKPTNRVSPRPKSVDSHSDSDIDSNRFINKSRLSLPNQKRPDLDKPKTNRGRPRKIKQSRSGSDTEVKIKKRGRPPGSSTKNRSLSGSENEAPKKRGRPPLKSKRPPSPSSSEDERKPSVFDKPAPPRRRTISKRDSDSDTDNKSHKTTSLDRDLKRSNLTKHKHNKPAKSEEKDRYIKTKNDSENDEWGKMNKNRIRNHLFERSQEEISLKQNQQKRSSDSPKKKETAASFRRKGISNTNAKSSPYVATSTDSDSDLDNKQAVKKLSLDATKRNRSRSSSDSDINDRFSDVDRMSNLISAAKVESPVKVESGGKAVQDKKKSDTLRKLFTPKRDSEGGKGGGKGGGKGGKGGKGKGGVNVIIVDGDYERSSSSVDDEILPRIPTISGSKDARVQSSNASVKRHKNGTTFSETLKLKSEKPSLKVRLNLSNVDCGKLKNAPKLNKVQQQHLSVAAETKQLETKKIKIEPKEEVKIKSERTNLNDSDSEADKKTNWKSEKDPDNPKVVNHKRKRLNSCSSSISSLSTVSSLSHTSRRKEHRKDKEDHHKSKRRKDKSEATQRSHVNSNNLTDAPPTNHEREVARIPPIPSPAERNSTWSQPIREYHSYFEKSDEPSEDQERDQNKYLTEAKRLKHLADKETDTIKQGMLYMEAVLYFLLTGNVMEQESSEKPAFTMFKDTLSLIKYISSKFRGEQSNCSSLHAKLAVLSYRCQALLYYKLFKMRRPELKDNHKLVNEFCSKSANIAPIQSDQINHTLGGQGTPCPLSPTPSPAGSVGSVGSQSSGYSSGELAMRGNSATPSTSTANPCMLMPLPVYHAVTKLNQNYLYLFSYQDLWDQADSLVMKGKHKDFFIELDKQYKPLTLHSSLIELVKYVRNGITRLKEKM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00950854;
90% Identity
-
80% Identity
-