Mneu007609.1
Basic Information
- Insect
- Malacosoma neustria
- Gene Symbol
- lrrfip2_1
- Assembly
- GCA_963693495.1
- Location
- OY856376.1:20654188-20672558[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-79 3.6e-75 253.8 29.5 1 297 112 392 112 395 0.90 2 2 0.6 1.9e+04 -4.6 15.1 1 160 391 447 391 465 0.54
Sequence Information
- Coding Sequence
- ATGGGTCAAAGATCAGAATTAGCGACACCTGATAACAGTGACGAAGAGAGCGGAGACGCCTTCACCGATGGTGATTTTGAAGACTCGGAAGATGAAACGCTTATTGAGAAAAATGACTTACCACAATCTAGTATACCGGTGAATGAAACCGTGAATAAACAGCTAGCAAAGAATGTTAACGGGGAATCAATGAATGGATCTTTGAAAGAGAAGGAGTCTACAGTTAACGGTGATAATGAAAACCAAACTCTTTTTATAAATGACGCAAGAAGAGATTCCCATAGTGATCAGAGTTCTTCGATCGTTGGAATTCTCGGAGACCAACAGAACCACGCGGAGCAAAGACTAGCGGCGCGGAGGGCCGCTCGAGCTGAAGCGCGCGAGATTCGCATGAGAGAGTTAGAAAGACAGCAACGAGAACAAGAAGATCATGCCGACAAGGCATATGACATGTACGCAGAAACGGTCGGGAGAAGAGGTGGCACTAGGTTGGCGGCCCTCAGTCCGGCGTCAGTACATTCCCCTCGCCGAAGCTCGGAAGACTCTGCAGATGACACGATCAGCGTTAAGGACCTTAGGCACGAACTCAAAGAGGTTGAGGAGAAATTCCGTAAAGCGATGATACTGAACGCCCAGCTGGACAACGACAAAGCCTCCCTGGGGTACCAGTTGGAGCTGCTCAAGGACAGGATAGAGGAGTTGCAGGAGGAATATGCCCAATTACagCGCGAACACAAGGAGAAGTGTTCGGCTCACGAGCGTTTAAAGCGTGAACACGTGTCGATGGAACGGGAACTGGATGCGGCGAGAGGGGCGGTAAGGGCGCGCGACGCGGCCGCCGCGGAGGCAGGCTTCGCGTTCGTGGAGGCCGCCACGAAGACCACCGCCGAGGACTTCGGACCCGTGCCCCAATTGGCTCTCGTCAGCCACCAAGCGGAGCAACTCCTCAACGACGCCGGGGAGGGCACGCTCGATGTACGGTTGCAGAAAGTCCTCAGCTCAAAGCAGGCGTTGGAGTCTGAAGTGCGGAAACTGAAGCTGCAGTTGAACGAGGAGCGCGCGGCCAGGCAGAACGGCGTCGCCAACCACCACGACCAGGAGTACGAGAACGAATtgGAGTTAGCCCGGAAATGTGCATCGGAAGCGAAAGGACGCGCGGCGCGAGCGGAAGCGGAAGCGGCGCTGCAGGCGGCGGCCGTGGCGCGCCTCGAGGCGCAAGTGGCCAGGCTCAAGGCCAGGCAGGACCACCAGGATGAGCACGAGGAGCAGCTCAAGCAGGAGAGGCGGAGGCTGCAGCGGGAGGCCCGCGAAGCTCTCAACAGAGTTGAGGAATTGGAAACTGAGAACAGCCATTTGACGAAACGTCTCGACAAATTGAAGAACGCGAAGTCCGCGCTACTGAAGGACCTGTGA
- Protein Sequence
- MGQRSELATPDNSDEESGDAFTDGDFEDSEDETLIEKNDLPQSSIPVNETVNKQLAKNVNGESMNGSLKEKESTVNGDNENQTLFINDARRDSHSDQSSSIVGILGDQQNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAETVGRRGGTRLAALSPASVHSPRRSSEDSADDTISVKDLRHELKEVEEKFRKAMILNAQLDNDKASLGYQLELLKDRIEELQEEYAQLQREHKEKCSAHERLKREHVSMERELDAARGAVRARDAAAAEAGFAFVEAATKTTAEDFGPVPQLALVSHQAEQLLNDAGEGTLDVRLQKVLSSKQALESEVRKLKLQLNEERAARQNGVANHHDQEYENELELARKCASEAKGRAARAEAEAALQAAAVARLEAQVARLKARQDHQDEHEEQLKQERRRLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00433169;
- 90% Identity
- -
- 80% Identity
- -