Dpun001031.1
Basic Information
- Insect
- Dendrolimus punctatus
- Gene Symbol
- LRRFIP2
- Assembly
- GCA_012273795.1
- Location
- CM022537.1:19563423-19586881[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.097 2.3e+03 -2.0 0.7 68 97 63 92 17 108 0.51 2 3 1.3e-77 3.1e-73 247.1 27.3 1 295 123 401 123 404 0.88 3 3 1 2.3e+04 -6.5 17.1 1 48 402 448 402 476 0.70
Sequence Information
- Coding Sequence
- ATGGGCCATCGATCGGAGGTAGCCACGCCTGAAAACAGTGACGAGGAGAGCGGTGATGCTTTCACCGATGGCGATTTTGATGTTTCAGAAGACGAAGCCCTCGGAGAACGTACTGACGTTTCTACAACCAATATAACACTTACTGAAACAGTAAATGTAGAAATCACGAAGACTGTGAACGGTGAATCATTAAATGGATCCCTTGATGAGAGTTCTGAGAACGAACCAAAAGTCAATGGAAGAAAGAACAGTGAAAAATTAGGTGATATAGAAAACCAAAGTCAATTAATAACCGACGCAAGGAGAGATTCTCATAGTGAACAGAGTCCTTCGATAGTTGGGATTTTAGGAGATCAGCAGAATCATGCAGAGCAGAGGCTAGCAGCGAGGAGAGCTGCTCGAGCGGAAGCTCGTGAAATTCGCATGAGAGAGTTGGAAAGACAACAGAGAGAACAAGAGGACCATGCCGACAAGGCGTATGACATGTATGCAGAGACGGTTGGAAGACGAGGTGGAACCAGGTTGGCGGCACTCAGTCCTGCAGCAGTGCTTTCGCCTCGAAGAAGTTCGGAAGATTCAGCAGACGATTCGTTTAACATTAAGGACCTTCGACACGAACTCAAAGAGGTTGAAGAGAAATTCCGCAAAGCGATGATATTGAACGCGCAACTTGACAACGATAAAGCTGCGTTGGGATACCAGTTGGAGCTACTAAAAGACAGGATAGAGGAATTACATGAAGAATATGCCCAGTTACAACGTGAGCACAGGGAGAAGTGTTCGGTTCACGAGCGTTTAAAGCGCGAGCATGTGTCCGTGGAGCGGGAGCTGGAAGCTGCGAGGGCCGCGGTCAGGGCGAGGGACTTCGCCGCCGCCGAAGCGGGCTTCGCTTTCGTCGAGGCCTCCGTGCAGACGAGCACCGAGGACTTCGGGCCGGTGCCCCAGTTGGCGCTGGTCAGCCACCAGGCGGAGCAGCTGCTCAACGACGCCGGGGAGGGGACGCTGGACGTGCGGTTGCAGAAATTGGTCGGCTCTAAACAAGCTTTGGAGTCTGAGGTGCGCAAGCTGAAGCTGCAGTTGAACGAGGAGCGCGCGGCCAGGCAGAACGGCGTCGCCAACCACCACGACCAGGAGTACGAGAGCGAGCTGGAGGCGGCGCGCAAGTCGGCGGGCGAGGCGAAGGCGCGAGCGGCGCgcgcggaggcggaggcggcgCTGCAGGCGGCGGCCGTGGCGCGGCTCGAGGCGCAGGTGGCGCGGCTGCGCGCGCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGAGGCGGAGGCTCCAGAGGGAGGCTCGCGAAGCCCTCAATCGAGTTGAAGAATTGGAGACCGAGAACAGCCATTTGACGAAACGACTCGACAAACTGAAGAACGCGAAGTCCGCATTGCTCAAGGACCTGTGA
- Protein Sequence
- MGHRSEVATPENSDEESGDAFTDGDFDVSEDEALGERTDVSTTNITLTETVNVEITKTVNGESLNGSLDESSENEPKVNGRKNSEKLGDIENQSQLITDARRDSHSEQSPSIVGILGDQQNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAETVGRRGGTRLAALSPAAVLSPRRSSEDSADDSFNIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYAQLQREHREKCSVHERLKREHVSVERELEAARAAVRARDFAAAEAGFAFVEASVQTSTEDFGPVPQLALVSHQAEQLLNDAGEGTLDVRLQKLVGSKQALESEVRKLKLQLNEERAARQNGVANHHDQEYESELEAARKSAGEAKARAARAEAEAALQAAAVARLEAQVARLRARQDHQDEHEEQLKQERRRLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00947909;
- 90% Identity
- -
- 80% Identity
- -