Msep277577.1
Basic Information
- Insect
- Magicicada septendecula
- Gene Symbol
- -
- Assembly
- GCA_034769895.1
- Location
- CM068376.1:186310370-186312175[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5e-10 8e-08 35.9 0.0 5 40 19 54 18 56 0.94
Sequence Information
- Coding Sequence
- ATGGTGAGAGATTACAAAAGAAAGACGCAGAGGCAAGAGTGGTCGGCAGTTTCCATGCAAGAAGCTGTTAAAGCAGTAATAAATGGCTCAATGGGATACAAAAAGGCAGCTCTTCAGTTCAAAGTGCCACAAACAACTTTAGAGCGCCACGTTAAGAAAAAAAGAGATGATCCAGAGCATTCTGTGAAGAAATCTATGGGACGTTTCACTTGTGTTTTTAATGAAGCACAAGAATCCGAGATTGTGGATTATTTAACTAAAATGGAGGCTCAACTCTTCGGTCTTACTATCAATGAACTTCGTGACCTTGCTTTCCAGCTAGCAGAGCGAAATAAATTGAATCATCCATTTTGTGAGAATGGAAAAGCTGGTGTAGACTGGGCAAGAGGATTTTTAACTCGCCACCCTAATTTAAGCATAAGAAGACCTGAGGCTACGTCTGCAGCTCGTGCGATGGGCTTCAATAAGGTTGTTGTAGAACAGTTCTTCAGCCATCTATCCTACGTAGTTGATACTTACCAGCTTACACCAGACAGgatttataactgtgatgaaacaggtCTAACTGTAAACCCTAAAGGGCATTCGAAGATAATAGCAAAAAGAGGCCGTAGACAGGTTGGCACAGTCACATCAGCCGAGAGGGGTCAAACTGTTACAGCTGAAATATGCTTTTCAGCTGCTGGAACCTACATCGCTCCAATGCTAATTTTTCCTAGAAAACGGATGCAGCAGGAATTTCAGACCGGACTTCCCCCAAGTGCGACTTCACAGGTCCATCAAACAGGATGGATGACCAAAGAACTTTGTTTAGTTTGGTTTGAAAAGTTCATATCTTTTACAGGAGCAAAAAAAGAGAAACCAATGCTACTACTCTTGGATGGGCATTCAACACACACGAAAAGTTTAGCACTAATTGATATGGCTCGTGCAAATGGAGTGATTCTCTTGTGTTTCCCTCCCCACtgttcccatagactccaaccccTTGACGTTAGATTTGTGAAGCCCTTAAGTAAATACTATGAGGAGGAAGTCCGTAAATGGCTTAGATGCAATCCAGGAAAAGTGGTGACATTATTCCAGATCGCTTCTCTGTTTGGTACCGCCTATGTTCAAgcatcaacaatgatgacagccgTGAACGGGTTCCGGAAAACAGGCATATGGCCTGTTGATATGAATGTTTTTAATGATGCAGATTTTTTGCCTTCGGTAACTACAGACATCCAGCTCCCTACTGACATTGCTAATGAGGCTACAGTTTTAAATATACAGGCAGACCTGACCTCACCATCTCTGAGTAGTCCTGAAAAACTTAATATGCCGAGCTGTAGTAGGTCTAATTTCAAATGTGCCACCCCGGAAAACATTTTACCCATACCAAAAATTTCTCAGGAAAATAAACGTGTTTCAAAAAATCGTGGTAAAAGTACTATCTTAACATCATCACCATATAAAAATAAGCTACATagtgctgaaaaaaataaaattggggtcaagaaaccagtgaaaagacgccttttactttctaaaaaagctctgaaaaaatgtccagataaacagagaaacatatCACCTGAAAATGACAAAAACTATAACCTTAACAAACCAACTGTTTTCGTAACTCCTCAGTCATCTAGTGAAGAAGTCGATAGCGAAGATGAGTGTCTCTACTGTCATGATTCTTCTGAAGAAGGTTGGATTAGATGTGTTTCTTGCCTAAAATGGGCTCACAACTTTTGCGCAGGAATCGAAAGTGAAGACGAGGATGTCACACACATTTGTGCTCTTTGTGAAACATGA
- Protein Sequence
- MVRDYKRKTQRQEWSAVSMQEAVKAVINGSMGYKKAALQFKVPQTTLERHVKKKRDDPEHSVKKSMGRFTCVFNEAQESEIVDYLTKMEAQLFGLTINELRDLAFQLAERNKLNHPFCENGKAGVDWARGFLTRHPNLSIRRPEATSAARAMGFNKVVVEQFFSHLSYVVDTYQLTPDRIYNCDETGLTVNPKGHSKIIAKRGRRQVGTVTSAERGQTVTAEICFSAAGTYIAPMLIFPRKRMQQEFQTGLPPSATSQVHQTGWMTKELCLVWFEKFISFTGAKKEKPMLLLLDGHSTHTKSLALIDMARANGVILLCFPPHCSHRLQPLDVRFVKPLSKYYEEEVRKWLRCNPGKVVTLFQIASLFGTAYVQASTMMTAVNGFRKTGIWPVDMNVFNDADFLPSVTTDIQLPTDIANEATVLNIQADLTSPSLSSPEKLNMPSCSRSNFKCATPENILPIPKISQENKRVSKNRGKSTILTSSPYKNKLHSAEKNKIGVKKPVKRRLLLSKKALKKCPDKQRNISPENDKNYNLNKPTVFVTPQSSSEEVDSEDECLYCHDSSEEGWIRCVSCLKWAHNFCAGIESEDEDVTHICALCET
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00944001; iTF_00943970; iTF_00944002; iTF_00943843; iTF_00943971; iTF_00944003; iTF_00943844; iTF_00944004; iTF_00944005; iTF_00943846; iTF_00944006; iTF_00943847; iTF_00944007; iTF_00943976; iTF_00944008; iTF_00943977; iTF_00944009; iTF_00944010; iTF_00944011; iTF_00944012; iTF_00944013; iTF_00944045; iTF_00943982; iTF_00944014; iTF_00944015; iTF_00944111; iTF_00944016; iTF_00943985; iTF_00944017; iTF_00944881; iTF_00944018; iTF_00944019; iTF_00944020; iTF_00943989; iTF_00943990; iTF_00943992; iTF_00943962; iTF_00943995; iTF_00944059; iTF_00944987; iTF_00943996; iTF_00943997; iTF_00944349; iTF_00943966; iTF_00943998; iTF_00944670; iTF_00943839; iTF_00943999; iTF_00944095; iTF_00944671; iTF_00944703; iTF_00944000; iTF_00943863;
- 90% Identity
- iTF_00943990;
- 80% Identity
- -