Basic Information

Insect: Magicicada septendecula
Gene Symbol: -
Assembly: GCA_034769895.1
Location: CM068369.1:470784028-470785832[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 3.2e-10 5.1e-08 36.5 0.0 5 40 19 54 18 56 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	3.2e-10	5.1e-08	36.5	0.0	5	40	19	54	18	56	0.94

Sequence Information

Coding Sequence: ATGGTGAGAGATTACAAAAGAAAGACGCAGAGGCAAGAGTGGTCGGCAGTTTCCATGCAAGAAGCTGTTCAAGCAGTAATAAATGGCTCAATGGGATACAAAAAGGCAGCTCTTCAGTTCAAAGTGCCACAAACAACTTTAGAGCGCCACGTTAAGAAAAAAAGAGATGATCCAGAGCATTCTGTGAAGAAATCTATGGGACGTTTCACTTGTGTTTTTAATGAAGCACAAGAATCCGAGCTTGTGGATTATTTAACTAAAATGGAGGCTCAACTCTTCGGTCTTACTATCAATGAACTTCGTGACCTTGCTTTCCAGCTAGCAGAGCGAAATAAATTGAATCATCCATTTGGTGAGAATGGAAAAGCTGGTGTAGACTGGGCAAGAGGATTTTTAACTCGCCACCCTAATTTAAGCATAAGAAGACCTGAGGCTACGTCTGCAGCTCGTGCGATGGGCTTCAATAAGGTTGCTGTAAAACAGTTCTTCAGCCATCTATCCTACGTAGTTGATACTTACCAGCTTACACCAGACAGgatttataactgtgatgaaacaggtCTAACTGTAAACCCTAAAGGGCATTCGAAGATAATAGCAAAAAGAGGCCGTAGACAGGTTGGCACAGTCACATCAGCCGAGAGGGGTCAAACTGTTACAGCTGAAATATGCTTTTCAGCTGCTGGAACCTACATCGCTCCAATGCTAATTTTTCCTAGAAAACGGATGCAGCAGGAATTTGAGACCGGACTTCCCCCAAGTGCGACTTCACAGGTCCATGAAACAGGATGGATGACCAAAGaactttttttagtttggtttgaaaagttcatatcttttacaggagcaaaaaaagagaaaccaatgctactactcttggatgggcattcaacacacacgaaaagtttagcactaattgatatggctcgtgcaaatggagtgattctcttgtgtttccctccccactgttcccatagactccaaccccttgacgttgcatttatgaagcccttaagtaaatactatgaggaggaagtccgtaaatggcttagatgcaatccaggaaaagtggtgacattattccagatcgcttctctgtttggtaccgcctatgttcaagcatcaacaatgatgacagccgtgaacgggttccggaaaacaggcatatggcctgttgatatgaatgtttttaatgatgcagattttttgccttcggtaactacagacatccagctccctactgacattgctaatgaggctacagttttaaatatacaggcagacctgacctcaccatctctgagtagtcctgaaaaacttaatatgccgagctgtagtaggcctaatttcaaatgtgccaccccggaaaacattttacccataccaaaaatttctcaggaaaataaacgtgtttcaaaaaatcgtgtgaaaagacgccttttactttctaaaaaagctctgaaaaaatatccagataaacagagaaacatatCACCTAAAAATGACAAAAACTATAACCTTAACAAACCAACTGTTTTCGTAACTCCTCAGTCATCTAATGAAGAAGTCGATAGCGAAGATGAGTGTCTCTACTgtcatgatttttctgaagaaggttggattagatgtgtttcttgcctaaaatgggctcacaactcttgcgcaggaatcgaaagtgaagacgaggatgtcacacacatttgtgctctttgtgaaacatga
Protein Sequence: MVRDYKRKTQRQEWSAVSMQEAVQAVINGSMGYKKAALQFKVPQTTLERHVKKKRDDPEHSVKKSMGRFTCVFNEAQESELVDYLTKMEAQLFGLTINELRDLAFQLAERNKLNHPFGENGKAGVDWARGFLTRHPNLSIRRPEATSAARAMGFNKVAVKQFFSHLSYVVDTYQLTPDRIYNCDETGLTVNPKGHSKIIAKRGRRQVGTVTSAERGQTVTAEICFSAAGTYIAPMLIFPRKRMQQEFETGLPPSATSQVHETGWMTKELFLVWFEKFISFTGAKKEKPMLLLLDGHSTHTKSLALIDMARANGVILLCFPPHCSHRLQPLDVAFMKPLSKYYEEEVRKWLRCNPGKVVTLFQIASLFGTAYVQASTMMTAVNGFRKTGIWPVDMNVFNDADFLPSVTTDIQLPTDIANEATVLNIQADLTSPSLSSPEKLNMPSCSRPNFKCATPENILPIPKISQENKRVSKNRVKRRLLLSKKALKKYPDKQRNISPKNDKNYNLNKPTVFVTPQSSNEEVDSEDECLYCHDFSEEGWIRCVSCLKWAHNSCAGIESEDEDVTHICALCET

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00944080;
90% Identity: iTF_00943982; iTF_00943976; iTF_00943977; iTF_00943985; iTF_00943966; iTF_00944080; iTF_00943863; iTF_00944045; iTF_00944001; iTF_00944002; iTF_00943843; iTF_00944003; iTF_00943844; iTF_00944004; iTF_00944005; iTF_00943846; iTF_00944006; iTF_00943847; iTF_00944007; iTF_00944008; iTF_00944009; iTF_00944010; iTF_00944011; iTF_00944012; iTF_00944013; iTF_00944014; iTF_00944015; iTF_00944111; iTF_00944016; iTF_00944017; iTF_00944881; iTF_00944018; iTF_00944019; iTF_00944020; iTF_00943989; iTF_00943992; iTF_00943995; iTF_00944059; iTF_00944987; iTF_00943996; iTF_00943997; iTF_00944349; iTF_00943998; iTF_00944670; iTF_00943839; iTF_00943999; iTF_00944095; iTF_00944671; iTF_00944703; iTF_00944000;
80% Identity: -