Mann016479.1
Basic Information
- Insect
- Macrophya annulata
- Gene Symbol
- lilli
- Assembly
- GCA_963924015.1
- Location
- OZ001260.1:21821718-21830900[+]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.5e-06 0.13 12.2 0.0 44 116 13 87 8 116 0.69 2 2 1.7e-06 0.049 13.5 0.0 324 382 164 223 159 228 0.77
Sequence Information
- Coding Sequence
- ATGGTTACGGATCAGAAAGTTAATCCGGATTCTCAAGACCGAACAACTCAACAGATACAATCAAAGTTGGGTAATTATTCACTGGTTAAACATCTACTGGATGAACCAAAAAGGCTGATAGGAATCGAAGGCGTACCTCCAAGCCCGGGACCCTTAGCTCAACGTAAGCCAGTTACTCAAGAATTTAAAAAGCCCGGAGGACCTCGTCCAAATTCGACCGGTACACACGGCTCGCAAAATAGTGGTTACGTTAAACCAGCTGATGGAAAACCACCCTATATGGGAAGAGGCGGTTATCCTGGTCAACCGGTCAAGCACGGTGGTGGGAGCAATGATCATCGAAGTCATGGTCTTCTGCCAGCCAAAGGTCCTCCTAATCCCGCAGGTAGAGGTGGCggcggtggaggtggaggCGGTGGCGGTAGCGGAGGTGGAGGAGGAAATAATCCCGGTTCAGGTGGAGTAGGACCGGGAGGAAGATTGCAAAATGCGGGAAGTCATCTCTCCCGATTACCTCTGGACAACGGTGCAATGTCCCGGCATTCCGCTACCGAGAATGCTGCAGACTTGGACAACATTctcaaggaGATGGCCCTGCCCATCACACCACTGACAGCTATAGCCCAAACCCCACGCAAAGAACCAGAGTCAAAATTTACCTTCAACTCATACCTCGCCAAGGTaagcaaataa
- Protein Sequence
- MVTDQKVNPDSQDRTTQQIQSKLGNYSLVKHLLDEPKRLIGIEGVPPSPGPLAQRKPVTQEFKKPGGPRPNSTGTHGSQNSGYVKPADGKPPYMGRGGYPGQPVKHGGGSNDHRSHGLLPAKGPPNPAGRGGGGGGGGGGGSGGGGGNNPGSGGVGPGGRLQNAGSHLSRLPLDNGAMSRHSATENAADLDNILKEMALPITPLTAIAQTPRKEPESKFTFNSYLAKVSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01303347;
- 90% Identity
- iTF_01412315;
- 80% Identity
- -