Malb011755.1
Basic Information
- Insect
- Macrophya alboannulata
- Gene Symbol
- -
- Assembly
- GCA_949628255.1
- Location
- OX451207.1:46101475-46105278[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.2 6.4e+03 -2.1 0.0 13 21 5 16 2 17 0.64 2 2 1.7e-11 1.5e-08 35.0 0.0 2 35 56 90 55 96 0.91
Sequence Information
- Coding Sequence
- ATGGAAAGTGTGGTCGATTGGAACAGGGGCCCAATGAGCACACGAGCGGCGGTTCACACCGAGGCCAAGTTGTTGGAGTCATCCCACGCTTGGCTCGGTGCCTCCACCTCCAGTATAGCCGCTGACTATTCAACCCTGCTGAAGTTGAAGGCTCCGACATGGACGCGTCACGATCTTCAGGAGGCTATAGAGGCCGTTGTTACCCAGAAGATGCGGTTCACTCAGGCCTCGACAAAGTATGGAATCCCGAAGGGTACCCTCTACGACAACATCCTAGGAAAATCTAAACGAATGATGGTACTTGAGGAGGCCGGCCTCAACCCGACCGAGGAAACTGCCGTTTTGGAATTTTGTTGCGATATTAGTGTTAGCCCTTACAATAGAAGGACCAAAAAGTCCCTAAACGCTATTTTAACATTCGTCGAAAGACTCAGGAGAAAACGAGATCCGGGTTTCATGTTCACCGGATTAGCTGGGTTCAGGTGGTGGTGGGCATTTTGCAAAAAGCATTCTATCGTCTCGCTTTATTTCAACGACGAGAACGAACACGAATGA
- Protein Sequence
- MESVVDWNRGPMSTRAAVHTEAKLLESSHAWLGASTSSIAADYSTLLKLKAPTWTRHDLQEAIEAVVTQKMRFTQASTKYGIPKGTLYDNILGKSKRMMVLEEAGLNPTEETAVLEFCCDISVSPYNRRTKKSLNAILTFVERLRRKRDPGFMFTGLAGFRWWWAFCKKHSIVSLYFNDENEHE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00219718;
- 90% Identity
- iTF_01453998;
- 80% Identity
- iTF_01412240;