Mrus024438.1
Basic Information
- Insect
- Machimus rusticus
- Gene Symbol
- sip1
- Assembly
- GCA_951509405.1
- Location
- OX608052.1:9761345-9764483[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-94 2.5e-90 304.1 15.1 2 275 397 662 396 662 0.98 2 2 0.096 2.1e+03 -0.7 0.1 243 270 675 702 664 707 0.76
Sequence Information
- Coding Sequence
- ATGTCGGACAACGAGTACGAAAGATTTGAAATAACAGATTATGATTTGGAAAACGAATTTAATCCAAATCGTCCGCGGAGGCGGCAAACGAAACACCAACAGATTTATGGTATTTGGGCAGATGATAGTGAAAATGAGGAGGAACAGGAACTAACGTCACGAAGAAGAGGCGGCAGGAAGACCAAGGACTATTCGGCTCCAGTTAGTTTTGTCGCAGGAGGAATCCAACAGTCTGGCAAAAAGGACGATGATGAAGACGATGATATCGAAAATGATGAATCACAAATTACTGATGAAGagGACGAACGACCTTCCTTCGGTCGGAAAGCAGTCGAAAGAGCTTCGTCCTCAGAATCTGAATCAGAGCCAGAAGTTCGACCACAGCCTCCATCAAGGAATCCTGGATTCGGGAGTGGTCCCAGTCGACCATCCTCAACGAATGCTCGTCTCGGAAAATGGGAAGCCCATACAAAAGGAATTGGTGCAAAACTTTTGCTTCAAATGGGCTACGAGCCGGGAAAGGGTTTAGGTAAAGATCTCCAAGGTATCGCTCAACCGGTGGAAGCTCATATGAGAAAGGGTCGAGGAGCTATTGGCGCATATGGCCCTGAAAAAGCTGCTACTATAGCCaatcaaaaattgcaattaaaaattgacgAGGATGAGCGGGAAGCAAAGGAATTCAAGGATAAAATGAACATGTGGAAAAAAGACGGGAAGCCAGAAAAGAGTAAGAAAAATCGGTATTATTACAGGAGTGTGGAGGAAGTTATTGAGAAGGGAAAGAAATCTAGTTTCTTGACTGATAAATACAGcAATAAACTCAGCAATGTTACAGTCATAGACATGACGGGCCCCGAAAAGAGGGTGCTAAGTGGCTATCATGCTCTAGGACAGGCCAAAATTCTCGACGAGGAGCTGTACGAGCACAGACAGGCTAAAAAATGTACTAATTTCGCTCTTCCTGAACTTATGCATAATTTGAATCTAATCGTGGATATGTGCGAACAAGAAATTATCTCAATTGATAAAGCAGAACGGGAAGCTAATGAAAAACAGAAGCAACTTGAGcatgaaaaggaaaatcttgagaaaattgttaaacttGAAAATGATCACATAGACACTCTAGAACAGGCTCTAGATTTGGTAGAAAATTTGACGAACCCTGAAGATCCTCTAACGCTTTCTAAggcagaaaaaatatttgtaaaattgcaaaCTGATTTTTCTGCAGAATATAAAGAATTTGGTTTAGGGGATCTGGCGGCGGGGGTAATAGCACCGCTGGTTAACCAGGAATTAAGCAGCTGGAAACCTCTAGACGAGCCTACTAAATACGTAGAAGTTATAAAGAGATGGCGAACTATCTTAGGAATGCATCAGTCGGAAACAAGAAACGTTTTCGATCCGTACTCTTCCTTAGTTTGGGCTGGAGTTATTCCTAGTTTTCGGCAGGCAGCCTCTACTTGGAATCCAAAACACCATCAGTCAATGGCTGCTTTGTTGGAGGCTTGGGCACCGCTTTTTCCAACTTGGATTCTTGATAATATTTTGGAACAAGTTATTTTACCTAGGCTCTCATCAGCCGTTCAAGATTGGGATCCACTCACAGATACCGTTCCAATTCATGTATGGATTTTGCCTTGGAGCGCTATTTTGGGTCATAAAATGGAGGAATTCGTGTATCCCATGATTCGCGATAAGCTGGGTAATGCGTTGCATGCATGGGTTCCACAGGACCGATCAGCTAGACTTATGCTCACTCCTTGGAAATGTGCATTTTCTGAAGGTGAAATGCAGAGTTTCTTGATGAAGCACATTATCCCTAAACTTCAAATGACTCTTgctgaaataattataaatccTCTTCAACAAGATCTAGagCTCTGGAATCAAGTTTGGGAATGGCATGAATTAATTTCTCCCCTATTTATGGCACAACTCCtcgacaaatattttttcccaaagtGGATGCAAACTCTGGTCATTTGGTTAAACCAGCAACCCAACCTCGAACAAATCTCGCGGTGGTACACCGGATGGAAGGGACTAATAACAGACGAAGTGTTACAACAGCCTAACATTAAGGAGTATTTTCGAAGAGCTCTGGAGCTTATGCATCGGGCGGTGTCCACTCCTCAAAATGCTGAGGCTCCTCCTGttcaacagcagcaacaacagccTCAGCCACAACCTCAAGTTCAGGCACAACCGCAGCAAGTTTCTCATCCTCCTGCTCTGATGGATCTTCAAATTCCACCTCCACCTCAGATAGAATTCAAGGAGTTGGTCTCACAGAGATGCGCCGAACGAGGGATTATTTTTGCTCCACTACCTGGACGAAGGGAATTCGGAAAGCAGGTGTACAGGGTGGGTAAACTATTTTGCTACATCGATCGGGCTGTGCTTATGGTCAGCGATGGAAGTTTCTCAAATTGGACGCCGACTTCTTTGGGATTGCTTTTAGAGAGGGCTTCGTAG
- Protein Sequence
- MSDNEYERFEITDYDLENEFNPNRPRRRQTKHQQIYGIWADDSENEEEQELTSRRRGGRKTKDYSAPVSFVAGGIQQSGKKDDDEDDDIENDESQITDEEDERPSFGRKAVERASSSESESEPEVRPQPPSRNPGFGSGPSRPSSTNARLGKWEAHTKGIGAKLLLQMGYEPGKGLGKDLQGIAQPVEAHMRKGRGAIGAYGPEKAATIANQKLQLKIDEDEREAKEFKDKMNMWKKDGKPEKSKKNRYYYRSVEEVIEKGKKSSFLTDKYSNKLSNVTVIDMTGPEKRVLSGYHALGQAKILDEELYEHRQAKKCTNFALPELMHNLNLIVDMCEQEIISIDKAEREANEKQKQLEHEKENLEKIVKLENDHIDTLEQALDLVENLTNPEDPLTLSKAEKIFVKLQTDFSAEYKEFGLGDLAAGVIAPLVNQELSSWKPLDEPTKYVEVIKRWRTILGMHQSETRNVFDPYSSLVWAGVIPSFRQAASTWNPKHHQSMAALLEAWAPLFPTWILDNILEQVILPRLSSAVQDWDPLTDTVPIHVWILPWSAILGHKMEEFVYPMIRDKLGNALHAWVPQDRSARLMLTPWKCAFSEGEMQSFLMKHIIPKLQMTLAEIIINPLQQDLELWNQVWEWHELISPLFMAQLLDKYFFPKWMQTLVIWLNQQPNLEQISRWYTGWKGLITDEVLQQPNIKEYFRRALELMHRAVSTPQNAEAPPVQQQQQQPQPQPQVQAQPQQVSHPPALMDLQIPPPPQIEFKELVSQRCAERGIIFAPLPGRREFGKQVYRVGKLFCYIDRAVLMVSDGSFSNWTPTSLGLLLERAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01256405;
- 90% Identity
- iTF_00628364;
- 80% Identity
- -