Lbel028523.1
Basic Information
- Insect
- Lysandra bellargus
- Gene Symbol
- clz9
- Assembly
- GCA_905333045.1
- Location
- HG995357.1:3722978-3725674[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.6e-10 1.4e-07 31.7 0.0 1 41 14 55 14 58 0.91
Sequence Information
- Coding Sequence
- ATGGTTCGCCACTATAAAAAGAAAACTGAAAAGACTTATACTGAGGCAGAACTGCAGCAAGCACTGAAAGATGTGAACAATAAAAACATGACGAGCTACCAAGCAGCAGAAAAATACGGTATACCAAGATCCACTATTATAAGTAGAGTATACCACACTGATATGAGCGACAAGATTGGGAGACCAACGGTTTTTTCAGAAGAAACAGAAAAACGAATGGCAAATAGCTTACACATTATGGAAAAACATGGTTTCCCATTAACCAGAAAAGAAGTGGCAGTTCTCGTGTCTCAATTTGTGCGCAGAAATGGAATTAACACTCCGTTTAAAAATGATATGCCAGGAAAGGATTGGCTGCAGGCCTTCCAAAAAAGACACAGCCTATCGATTAAAAAGCCACAATCCGTCGAAATCGCCAGACGAATGGCATGTGACCCATATATTATTTATGGTTATTTCAATTTATTGAGCGAAGTGCTGGCATGCCTGGGGTTAGAGGATAAGCCTCAACAAATTTATAACTTAGATGAAACCAGCATATGTAATGACCCTGTCAAAGGTAAAGTTATTGGCAAGCAAGGATTTCGCTGTACCCGGACAACTAGTGGTCCCGGAAGAAATAATACAACTGTGTTACTGGCGGCAAATGCTTCCGGGAAAAAAGTACCACCACTTATAATTTTCCAAGGGAAACACCTTTGGACGGAGTGGTTGTATAAAAACGAAATGATTGATACCGCCTATGCAGTTAGTGAAAAGGGCTGGATGCAAACCAGCATATTTGAAAAATATATGAAATCGGTGTTTGTTCCTGCGTTGGGAAGTACGAGGCCGGTGCTGCTGATATATGACGGTCATTCGACGCACGTCGATTTAAATGTCATCGAATACGCGCAATCAGAAGGGGTTACAATTTTGAAACTTCCACCACACTCCTCACATGTTTTGCAGCCTCTAGACTGCAGCGCCATGAAACCCCTAAAAGACCGCTGGGAAGACGAAGTAATCAAATGGCAGAGGCTTCATATTGGTACAAACTTACCAAAGTCTGAATTTGCACGAATTCTAACCAAAATATGGGATGAACTGGATCCTCTAATTTTACAAAATGGATTTCGTAAGACTGGCATTCAACCATTAAATCGAAATGCCATCAAGGAGGAGATTTTTGACCCTTTGGTATTGCAAAAATGGAAGAATTCTCAGGCCGATGCCATACAAGAGAGCCCCATACCAGCAGTGCAAGTTGTGCATGGCTGTGGTTGCAACATAACACATGAATTGGAGAATTCTCAGTCCAACGCCATCCAAGCGGATTCTTTACCAGCGCAAGATAAGCATGGCTCTGATTGCAACGAGACACAAGAATTGGAAAATTCTCAGTCGAAAGCCATCCAAGCGGACTCTTTACCAGCGCAAGATAAGCATGGCTCTGATTGCAACGAGACACAAGAATTGGAAAATTCTCAGTCGAATGCCATCCAAGCGGACTCTTTACCAGCGCAAGATAAGCATGCCTGTTACAATTGCAACGAAACACAAGAATTCAAAGAGAATGTCATGCCTGTCGTACCATCGGTTCCAAGTTTAACCACAATTGCACTAACCAAAATAAATAAGCAATTTACAAACGGGCAAATAGTTGAAAAAATCTGTGACGAACCAAGTTCCAGTTTTTTTTCTAATAATAACTCCCACCAGAAAAAAGCGTATCAGAGTAACATCAAGATGCAAAACGTACCTATCACTGTCACGTCAAAACTGCCAATATCCAAAAAATTTGACTTGAACAAACTATCATCTCTGAAAATTTTAGATTGCAAGTTAGTGAAAAATGCAGCTAAGACAAACGAGCTTAAGGAGCCATGTGTTTCGTTTGAGGAATTATTGCTTCAAACTATATCAAAGAGTGATCTTCCAAAAACAAAGAAAAAGCGTATTGCTAACAGCAACGACGAAGTTTTGACATATAAAGACACAATAGATAGAATGAAAAAAGAAAAAGAAGAGAAGGAGATGATACTAAAAGATAAAGAAAATAAAATAAAAAAAGAGAAGGAGAAGAAGAAAAAAGATAAAGAAAACCAAAAAAAACAAAAATTGCTTGAAAAACAGGCCATCTCAAAGAGCAAAAAACCCAGAAAACCTAAAAAACAGGAGAGAGAATCAGGCGGGTTGGATCCAAAGTCAAAGTATATTAAAAAGTCTGGTAAGAGGAATATCCGCAAGTGCCAGAAATACGTATCAGATAGTGATTCTCCTTGTTCATACGTATCTTTGAGTGAGACTGAATCGGTAGATAATTTGGAAACATTTTACAACCGCATGATGGAATTAGATTATGAGGAAAATGTTGCTGATGTGGAGTTAGTTGAAGCTAGTACATCTAAAATAATCCCAGTACAATGTTGGTCAAAACAAAAACCAAAAGAAGGAAAATTTATTTTAGCAAAATTCTCGTCATCGAAGGGCAAAAAGACCTTTAAGTATGTGTGCCAGATAGAAAGTGTGAGTGAAGGCAAAATTGTAGTACAAGGGTTTCATTCCTTAAACAAGAATAAAAAAGTCTTTCGTATTATCGAAAATGATCACTCAATCATAGAAGAACATGAGATAATTGATTATCTTCCCGACCCTGATGTGAAAGGCGTTGATTATATGTTTCCGAACGATATTGATATTAAAGAATATACTTAA
- Protein Sequence
- MVRHYKKKTEKTYTEAELQQALKDVNNKNMTSYQAAEKYGIPRSTIISRVYHTDMSDKIGRPTVFSEETEKRMANSLHIMEKHGFPLTRKEVAVLVSQFVRRNGINTPFKNDMPGKDWLQAFQKRHSLSIKKPQSVEIARRMACDPYIIYGYFNLLSEVLACLGLEDKPQQIYNLDETSICNDPVKGKVIGKQGFRCTRTTSGPGRNNTTVLLAANASGKKVPPLIIFQGKHLWTEWLYKNEMIDTAYAVSEKGWMQTSIFEKYMKSVFVPALGSTRPVLLIYDGHSTHVDLNVIEYAQSEGVTILKLPPHSSHVLQPLDCSAMKPLKDRWEDEVIKWQRLHIGTNLPKSEFARILTKIWDELDPLILQNGFRKTGIQPLNRNAIKEEIFDPLVLQKWKNSQADAIQESPIPAVQVVHGCGCNITHELENSQSNAIQADSLPAQDKHGSDCNETQELENSQSKAIQADSLPAQDKHGSDCNETQELENSQSNAIQADSLPAQDKHACYNCNETQEFKENVMPVVPSVPSLTTIALTKINKQFTNGQIVEKICDEPSSSFFSNNNSHQKKAYQSNIKMQNVPITVTSKLPISKKFDLNKLSSLKILDCKLVKNAAKTNELKEPCVSFEELLLQTISKSDLPKTKKKRIANSNDEVLTYKDTIDRMKKEKEEKEMILKDKENKIKKEKEKKKKDKENQKKQKLLEKQAISKSKKPRKPKKQERESGGLDPKSKYIKKSGKRNIRKCQKYVSDSDSPCSYVSLSETESVDNLETFYNRMMELDYEENVADVELVEASTSKIIPVQCWSKQKPKEGKFILAKFSSSKGKKTFKYVCQIESVSEGKIVVQGFHSLNKNKKVFRIIENDHSIIEEHEIIDYLPDPDVKGVDYMFPNDIDIKEYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01248033; iTF_01248034; iTF_00164268; iTF_00164269; iTF_00164270; iTF_00933666; iTF_00164271; iTF_00403707;
- 90% Identity
- iTF_01248033; iTF_00933666; iTF_01248034; iTF_00164268; iTF_00164271; iTF_00403707; iTF_00164270; iTF_00164269;
- 80% Identity
- -