Basic Information

Insect: Aricia agestis
Gene Symbol: clz9
Assembly: GCA_905147365.1
Location: LR990274.1:11565385-11568078[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.6e-09 5.7e-07 29.6 0.0 4 41 17 55 14 58 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.6e-09	5.7e-07	29.6	0.0	4	41	17	55	14	58	0.90

Sequence Information

Coding Sequence: ATGGTTCGCCACTATAAAAAGAAAACTGAAAAGACTTATACTGTGGCAGAACTGCAGCAAGCACTGAAAGATGTGAACAATAAAAACATGACGAGCTACCAAGCAGCAGAAAAATACGGTATACCAAGATCCACTATTATAAGTAGAGTATACCACACTGATATGAGCGACAAGATTGGGAGACCAACGGTTTTTTCAGAAGAAACAGAAAAACGAATGGCAAATAGCTTACACATTATGGAAAAACATGGTTTCCCATTAACCAGAAAAGAAGTGGCAGTTCTCGTGTCTCAATTTGTGCGCAGAAATGGAATTAACACTCCGTTTAAAAATGATATGCCAGGAAAGGATTGGCTGCAGGCCTTCCAAAAAAGACACAGCCTATCGATTAAAAAGCCACAATCCGTCGAAATCGCCAGACGAATGGCATGTGACCCATATATTATTTATGGTTATTTCAATTTATTGAGCGAAGTGCTGGCATGCCTGGGGTTAGAGGATAAGCCTCAACAAATTTATAACTTAGATGAAACCAGCATATGTAATGACCCTGTCAAAGGTAAAGTTATTGGCAAGCAAGGATTTCGCTGTACCCGGACAACTAGTGGTCCCGGAAGAAATAATACAACTGTGTTACTGGCGGCAAATGCTTCCGGGAAAAAAGTACCACCACTTATAATTTTCCAAGGGAAACACCTTTGGACGGAGTGGTTGTATAAAAACGAAATGATTGATACCGCCTATGCAGTTAGTGAAAAGGGCTGGATGCAAACCAGCATTTTTGAAAAATATATGAAATCGGTGTTTGTTCCTGCGTTGGGAAGTGCGAGGCCGGTGCTGCTGATATATGACGGTCATTCGACGCACGTCGATTTAAATGTCATCGAATACGCGCAATCAGAAGGGGTTACAATTTTGAAACTTCCACCACACTCCTCACATGTTTTGCAGCCTCTAGACTGCAGCGCCATGAAACCCCTAAAAGACCGCTGGGAAGACGAAGTAATCAAATGGCAGAGGCTTCATATTGGTACAAAATTACCAAAGTCTGAATTTGCACGAATTCTAACCAAAATATGGGATGAACTGGATCCTCTAATTTTACAAAATGGATTTCGTAAGACTGGCATTCAACCATTAAATCGAAATGCCATCAAGGAGGAGATTTTCGACCCTTTGGTATTGCAAAAATGGAAGAATTCTCAGGCCGATGCCATACAAGAGAGCCCCATACCAGCAGTGCAAGTTGTGCATGGCTGTGGTTGCAACATAACACATGAATTGGAGAATTCTCAGTCCAACGCCATCCAAGCGGATTCTTTACCAGCGCAAGATAAGCATGGCTCTGATTGCAACGAGACACAAGAATTGGAAAATTCTCAGTCGAAAGCCATCCAAGCGGACTCTTTACCAGCGCAAGATAAGCATGGCTCTGATTGCAACGAGACACAAGAATTGGAAAATTCTCAGTCGAATGCCATCCAAGCGGACTCTTTACCAGCGCAAGATAAGCATGCCTGTTACAATTGCAACGAAACACAAGAATTCAAAGAGAATGTCATGCCTGTCGTACCATCGGTTCCAAGTTTAACCACAATTGCACTAACCAAAATAAATAAGCAATTTACAAACGGGCAAATAGTTGAAAAAATCTGTGACGAACCAAGTTCCAGTTTTTTTTCTAATAATAACTCCCACCAGAAAAAAGCGTATCAGAGTAACATCAAGATGCAAAACGTACCTATCACTGTCACGTCAAAACTGCCAATATCCAAAAAATTTGACTTGAACAAACTATCATCTCTGAAAATTTTAGATTGCAAGTTAGTGAAAAATGCAGCTAAGACAAACGAGCTTAAGGAGCCATGTGTTTCGTTTGAGGAATTATTGCTTCAAACTATATCAAAGAGTGATCTTCCAAAAACAAAGAAAAAGCGTATTGTTAACAGCAACGCCGAAGTTTTGACATATAAAGACACAATAGATAGAATGAAAAAAGAAAAAGAAGAGAAGGAGATGATACTAAAAGATAAAGAAAATAAAAAAAAAGAGAAGGAGAAGAAGAAAAAAGATAAAGAAAACCAAAAAAAACAAAAATTGCTTGAAAAACAGGCCATCTCAAAGAGCAAAAAACCCAGAAAACCTAAAAAACAGGAGAGAGAATCAGGCGGGTTGGATCCAAAGTCAAAGTATATTAAAAAGTCTGGTAAGAGGAATATCCGCAAGTGCCAGAAATACGTATCAGATAGTGATTCTCCTTGTTCATACGTATCTTTGAGTGAGACTGAATCGGTAGATAATTTGGAAACATTTTACAACCGCATGATGGAATTAGATTATGAGGAAAATGTTGCTGATGTGGAGTTAGTTGAAGCTAGTACATCTAAAATAATCCCAGTACAATGTTGGTCAAAACAAAAACCAAAAGAAGGAAAATTTATTTTAGCAAAATTCTCGTCATCGAAGGGCAAAAAGACCTTTAAGTATGTGTGCCAGATAGAAAGTGTGAGTGAAGGCAAAATTGTAGTACAAGGTTTTCATTCCTTAAACAAGAATAAAAAAGTCTTTCGTATTATCGAAAATGATCACTCAATCATAGAAGAACATGAGATAATTGATTATCTTCCCGACCCTGATGTGAAAGGCGTTGATTATATGTTTCCGAACGATATTGATATTAAAGAATATACTTAA
Protein Sequence: MVRHYKKKTEKTYTVAELQQALKDVNNKNMTSYQAAEKYGIPRSTIISRVYHTDMSDKIGRPTVFSEETEKRMANSLHIMEKHGFPLTRKEVAVLVSQFVRRNGINTPFKNDMPGKDWLQAFQKRHSLSIKKPQSVEIARRMACDPYIIYGYFNLLSEVLACLGLEDKPQQIYNLDETSICNDPVKGKVIGKQGFRCTRTTSGPGRNNTTVLLAANASGKKVPPLIIFQGKHLWTEWLYKNEMIDTAYAVSEKGWMQTSIFEKYMKSVFVPALGSARPVLLIYDGHSTHVDLNVIEYAQSEGVTILKLPPHSSHVLQPLDCSAMKPLKDRWEDEVIKWQRLHIGTKLPKSEFARILTKIWDELDPLILQNGFRKTGIQPLNRNAIKEEIFDPLVLQKWKNSQADAIQESPIPAVQVVHGCGCNITHELENSQSNAIQADSLPAQDKHGSDCNETQELENSQSKAIQADSLPAQDKHGSDCNETQELENSQSNAIQADSLPAQDKHACYNCNETQEFKENVMPVVPSVPSLTTIALTKINKQFTNGQIVEKICDEPSSSFFSNNNSHQKKAYQSNIKMQNVPITVTSKLPISKKFDLNKLSSLKILDCKLVKNAAKTNELKEPCVSFEELLLQTISKSDLPKTKKKRIVNSNAEVLTYKDTIDRMKKEKEEKEMILKDKENKKKEKEKKKKDKENQKKQKLLEKQAISKSKKPRKPKKQERESGGLDPKSKYIKKSGKRNIRKCQKYVSDSDSPCSYVSLSETESVDNLETFYNRMMELDYEENVADVELVEASTSKIIPVQCWSKQKPKEGKFILAKFSSSKGKKTFKYVCQIESVSEGKIVVQGFHSLNKNKKVFRIIENDHSIIEEHEIIDYLPDPDVKGVDYMFPNDIDIKEYT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00933665;
90% Identity: iTF_00933665;
80% Identity: -