Basic Information

Insect: Cyaniris semiargus
Gene Symbol: clz9
Assembly: GCA_905187585.1
Location: LR994551.1:12448693-12451386[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 3.3e-10 1.2e-07 31.7 0.0 1 41 14 55 14 58 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	3.3e-10	1.2e-07	31.7	0.0	1	41	14	55	14	58	0.91

Sequence Information

Coding Sequence: ATGGTTCGCCACTATAAAAAGAAAACTGAAAAGACTTATACTGAGGCAGAACTGCAGCAAGCACTGAAAGATGTGAACAATAAAAACATGACGAGCTACCAAGCAGCAGAAAAATACGGTATACCAAGATCCACTATTATAAGTAGAGTATACCACACTGATATGAGCGACAAGATTGGGAGACCAACGGTTTTTTCAGAAGAAACAGAAAAACGAATGGCAAATAGCTTACACATTATGGAAAAACATGGTTTCCCATTAACCAGAAAAGAAGTGGCAGTTCTCGTGTCTCAATTTGTGCGCAGAAATGGAATTAACACTCCGTTTAAAAATGATAGGCCAGGAAAGGATTGGCTGCAGGCCTTCCAAAAAAGACACAGCCTATCGATTAAAAAGCCACAATCCGTCGAAATCGCCAGACGAATGGCATGTGACCCATATATTTTTTATGGTTATTTCAATTTATTGAGCGAAGTGCTGGCATGCCTGGGGTTAGAGGATAAGCCTCAACAAATTTATAACTTAGATGAAACCAGCATATGTAATGACCCTGTCAAAGGTAAAGTTATTGGCAAGCAAGGATTTCGCTGTACCCGGACAACTAGTGGTCCCGGAAGAAATAATACAACTGTGTTACTGGCGGCAAATGCTTCCGGGAAAAAAGTACCACCACTTATAATTTTCCAAGGGAAACACCTTTGGACGGAGTGGTTGTATAAAAACGAAATGATTGATACCGCCTATGCAGTTAGTGAAAAGGGCTGGATGCAAACCAGCATATTTGAAAAATATATGAAATCGGTGTTTGTTCCTGCGTTGGGAAGTGCGAGGCCGGTGCTGCTGATATATGACGGTCATTCGACGCACGTCGATTTAAATGTCATCGAATACGCGCAATCAGAAGGGGTTACAATTTTGAAACTTCCACCACACTCCTCACATGTTTTGCAGCCTCTAGACTGCAGCGCCATGAAACCCCTAAAAGACCGCTGGGAAGACGAAGTAATCAAATGGCAGAGGCTTCATATTGGTACAAACTTACCAAAGTCTGAATTTGCACGAATTCTAACCAAAATATGGGATGAACTGGATCCTCTAATTTTACAAAATGGATTTCGTAAGACTGGCATTCAACCATTAAATCGAAATGCCATCAAGGAGGAGATTTTTGACCCTTTGGTATTGCAAAAATGGAAGAATTCTCAGGCCGATGCCATACAAGAGAGCCCCATACCAGCAGTGCAAGTTGTGCATGGCTGTGGTTGCAACATAACACATGAATTGGAGAATTCTCAGTCCAACGCCATCCAAGCGGATTCTTTACCAGCGCAAGATAAGCATGGCTCTGATTGCAACGAGACACAAGAATTGGAAAATTCTCAGTCGAAAGCCATCCAAGCGGACTCTTTACCAGCGCAAGATAAGCATGGCTCTGATTGCAACGAGACACAAGAATTGGAAAATTCTCAGTCGAATGCCATCCAAGCGGACTCTTTACCAGCGCAAGATAAGCATGCCTGTTACAATTGCAACGAAACACAAGAATTCAAAGAGAATGTCATGCCTGTCGTACCATCGGTTCCAAGTTTAACCACAATTGCACTAACCAAAATAAATAAGCAATTTACAAACGGGCAAATAGTTGAAAAAATCTGTGACGAACCAAGTTCCAGTTTTTTTTCTAATAATAACTCCCACCAGAAAAAAGCGTATCAGAGTAACATCAAGATGCAAAACGTACCTATCACTGTCACGTCAAAACTGCCAATATCCAAAAAATTTGACTTGAACAAACTATCATCTCTGAAAATTTTAGATTGCAAGTTAGTGAAAAATGCAGCTAAGACAAACGAGCTTAAGGAGCCATGTGTTTCGTTTGAGGAATTATTGCTTCAAACTATATCAAAGAGTGATCTTCCAAAAACAAAGAAAAAGCGTATTGCTAACAGCAACGCCGAAGTTTTGACATATAAAGACACAATAGATAGAATGAAAAAAGAAAAAGAAGAGAAGGAGATGATACTAAAAGATAAAGAAAATAAAAAAAAAGAGAAGGAGAAGAAGAAAAAAGATAAAGAAAACCAAAAAAAACAAAAATTGCTTGAAAAACAGGCCATCTCAAAGAGCAAAAAACCCAGAAAACCTAAAAAACAGGAGAGAGAATCAGGCGGGTTGGATCCAAAGTCAAAGTATATTAAAAAGTCTGGTAAGAGGAATATCCGCAAGTGCCAGAAATACGTATCAGATAGTGATTCTCCTTGTTCATACGTATCTTTGAGTGAGACTGAATCGGTAGATAATTTGGAAACATTTTACAACCGCATGATGGAATTAGATTATGAGGAAAATGTTGCTGATGTGGAGTTAGTTGAAGCTAGTACATCTAAAATAATCCCAGTACAATGTTGGTCAAAACAAAAACCAAAAGAAGGAAAATTTATTTTAGCAAAATTCTCGTCATCGAAGGGCAAAAAGACCTTTAAGTATGTGTGCCAGATAGAAAGTGTGAGTGAAGGCAAAATTGTAGTACAAGGGTTTCATTCCTTAAACAAGAATAAAAAAGTCTTTCGTATTATCGAAAATGATCACTCAATCATAGAAGAACATGAGATAATTGATTATCTTCCCGACCCTGATGTGAAAGGCGTTGATTATATGTTTCCGAACGATATTGATATTAAAGAATATACTTAA
Protein Sequence: MVRHYKKKTEKTYTEAELQQALKDVNNKNMTSYQAAEKYGIPRSTIISRVYHTDMSDKIGRPTVFSEETEKRMANSLHIMEKHGFPLTRKEVAVLVSQFVRRNGINTPFKNDRPGKDWLQAFQKRHSLSIKKPQSVEIARRMACDPYIFYGYFNLLSEVLACLGLEDKPQQIYNLDETSICNDPVKGKVIGKQGFRCTRTTSGPGRNNTTVLLAANASGKKVPPLIIFQGKHLWTEWLYKNEMIDTAYAVSEKGWMQTSIFEKYMKSVFVPALGSARPVLLIYDGHSTHVDLNVIEYAQSEGVTILKLPPHSSHVLQPLDCSAMKPLKDRWEDEVIKWQRLHIGTNLPKSEFARILTKIWDELDPLILQNGFRKTGIQPLNRNAIKEEIFDPLVLQKWKNSQADAIQESPIPAVQVVHGCGCNITHELENSQSNAIQADSLPAQDKHGSDCNETQELENSQSKAIQADSLPAQDKHGSDCNETQELENSQSNAIQADSLPAQDKHACYNCNETQEFKENVMPVVPSVPSLTTIALTKINKQFTNGQIVEKICDEPSSSFFSNNNSHQKKAYQSNIKMQNVPITVTSKLPISKKFDLNKLSSLKILDCKLVKNAAKTNELKEPCVSFEELLLQTISKSDLPKTKKKRIANSNAEVLTYKDTIDRMKKEKEEKEMILKDKENKKKEKEKKKKDKENQKKQKLLEKQAISKSKKPRKPKKQERESGGLDPKSKYIKKSGKRNIRKCQKYVSDSDSPCSYVSLSETESVDNLETFYNRMMELDYEENVADVELVEASTSKIIPVQCWSKQKPKEGKFILAKFSSSKGKKTFKYVCQIESVSEGKIVVQGFHSLNKNKKVFRIIENDHSIIEEHEIIDYLPDPDVKGVDYMFPNDIDIKEYT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00933665;
90% Identity: iTF_00933665;
80% Identity: -