Basic Information

Gene Symbol
-
Assembly
GCA_905333045.1
Location
HG995324.1:13854125-13855733[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.27 54 4.9 0.0 51 86 104 138 82 139 0.77
2 4 0.019 3.8 8.6 0.1 33 85 180 231 153 233 0.72
3 4 0.098 20 6.3 0.2 47 83 284 319 259 321 0.79
4 4 0.00052 0.11 13.6 0.1 49 83 386 419 366 422 0.86

Sequence Information

Coding Sequence
ATGGAAGTAAATACGCATAACGAAAGTTATTGGTTTGTTGTGAGAGAAGACCAAAATAATGTTGTATTGAGTAGGTTCTGCGGTAACAATTTCGCCATCCAGAGTCCTCAAAGACCCGAAGCGAGATATGTCTTAGAGCCTTCCGTGAATCAACAGTATGCCCCAGTCAGCGTACCGCCTGAGGATGTTCCTAAAACATACGCTAAAGAGAGCACACCTAATAAAGAGGAGGAGAACTTCTGGGATCGAAACAAAGTCAAACTGTTCCTCAGTTTGTGTCTTAACGACAGTTTCAGAGGTGAGACAAACAACAGACCGCTTTGGAACGAAATCGCCTCGCATATCGGTACAACACCAGAGGAGTGCGACAAAAAATACCGAAATCTTCGACGCACATTCCTGAGATTACTAAAAAAGAAGAGATTAGGAAAAGATATAAAGTGGGTGCACTATCACGCCTGCGAGGAGGTGTTCAAAGACTGTCAAACGATGTCACCCGCCATCCTGGTGCCGTGGGAGGACTCCAAGATACGACAGCTCCTGACTCTGTACATCGAGAACATCAACAGGTTCAGAAGCTCTGAGTGTCTGCAGAAGGATGTGTGGAAGGAGATAGCGACTCAACTCCACACTACAGAGTACAATTGCTACCATAAATTCAAAAACTTGAAAAGAACATACTTCAATTACATGGAGAAAGGCAATGAATCTGGAAAGATAAAATGGCCGTACCACCACTTTTTCGAAAGAATATTTTACAACTACCATCCTGGCGAGAAGCCCTGGAGTAAATACAAGGTGAAGGTGCTCATTGCTGCATACACAGAAATAGCCGAGAAGTTCAAGAGCACTCAATACCAGAAGAAGGAGCTCTGGAAGGAGGTGTCGCGGAAGGTCGGGGAACCTGCCGGCAGCTGTGACAAGAAGTTCAGGAACCTCAAGCAGACGTACCTTCGATTGAGACGTAAAGCGATCTCCGGACGATGCATCACAAAATGGCGGTACTACAATGACTTTGTAAATCTATATGAAAATGAACATTCTGTACTAAATATACCTACAGATGAGATGCTTAAGCCTTCCGAAGCATGTCTCTATATCAAACAGCTGCTCAGGTTTTACATTGAAAACAAGGAGAAATTTAGTGATCCACTAGTCAAAAAGAAAAACTTGTGGAAACAGATAGCTCGAAAAATAGGTTACTCCCCCGAAGAGTGTGACAAGAAGTTTCGAAATTTAAAACATACGTACCTAAGACTGGCAGAGAAAAAATCCGCAACAGGCAAAGCCATCACTTGGCCCTACTTCTGCGACTTTGAAGAGATTTATGGGGAACCAAACTCAGCCCGAATGCAAGTCAAGCAGGAGTGTAATGTTGACAATGTAATGCTCTCAGAAATAAGGACCATAGTCCACACTGCAACCGACAGTAATGATAGAGATAAGTTTGATAAGTTAGTAAAAGCCGTTGAAGAGTCTAACAACATACAACGGGAAAGAAATAGAATATTACAGTTAATGTTGGATCGAATGCCAAATTAA
Protein Sequence
MEVNTHNESYWFVVREDQNNVVLSRFCGNNFAIQSPQRPEARYVLEPSVNQQYAPVSVPPEDVPKTYAKESTPNKEEENFWDRNKVKLFLSLCLNDSFRGETNNRPLWNEIASHIGTTPEECDKKYRNLRRTFLRLLKKKRLGKDIKWVHYHACEEVFKDCQTMSPAILVPWEDSKIRQLLTLYIENINRFRSSECLQKDVWKEIATQLHTTEYNCYHKFKNLKRTYFNYMEKGNESGKIKWPYHHFFERIFYNYHPGEKPWSKYKVKVLIAAYTEIAEKFKSTQYQKKELWKEVSRKVGEPAGSCDKKFRNLKQTYLRLRRKAISGRCITKWRYYNDFVNLYENEHSVLNIPTDEMLKPSEACLYIKQLLRFYIENKEKFSDPLVKKKNLWKQIARKIGYSPEECDKKFRNLKHTYLRLAEKKSATGKAITWPYFCDFEEIYGEPNSARMQVKQECNVDNVMLSEIRTIVHTATDSNDRDKFDKLVKAVEESNNIQRERNRILQLMLDRMPN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2