Basic Information

Gene Symbol
-
Assembly
GCA_905333045.1
Location
HG995324.1:13854125-13855733[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.00013 0.17 12.7 0.0 22 45 104 129 99 130 0.85
2 4 0.013 17 6.2 0.7 22 46 197 224 171 224 0.68
3 4 0.89 1.2e+03 0.3 0.1 22 45 289 313 279 314 0.75
4 4 0.0046 6.3 7.7 0.1 21 46 390 414 376 414 0.84

Sequence Information

Coding Sequence
ATGGAAGTAAATACGCATAACGAAAGTTATTGGTTTGTTGTGAGAGAAGACCAAAATAATGTTGTATTGAGTAGGTTCTGCGGTAACAATTTCGCCATCCAGAGTCCTCAAAGACCCGAAGCGAGATATGTCTTAGAGCCTTCCGTGAATCAACAGTATGCCCCAGTCAGCGTACCGCCTGAGGATGTTCCTAAAACATACGCTAAAGAGAGCACACCTAATAAAGAGGAGGAGAACTTCTGGGATCGAAACAAAGTCAAACTGTTCCTCAGTTTGTGTCTTAACGACAGTTTCAGAGGTGAGACAAACAACAGACCGCTTTGGAACGAAATCGCCTCGCATATCGGTACAACACCAGAGGAGTGCGACAAAAAATACCGAAATCTTCGACGCACATTCCTGAGATTACTAAAAAAGAAGAGATTAGGAAAAGATATAAAGTGGGTGCACTATCACGCCTGCGAGGAGGTGTTCAAAGACTGTCAAACGATGTCACCCGCCATCCTGGTGCCGTGGGAGGACTCCAAGATACGACAGCTCCTGACTCTGTACATCGAGAACATCAACAGGTTCAGAAGCTCTGAGTGTCTGCAGAAGGATGTGTGGAAGGAGATAGCGACTCAACTCCACACTACAGAGTACAATTGCTACCATAAATTCAAAAACTTGAAAAGAACATACTTCAATTACATGGAGAAAGGCAATGAATCTGGAAAGATAAAATGGCCGTACCACCACTTTTTCGAAAGAATATTTTACAACTACCATCCTGGCGAGAAGCCCTGGAGTAAATACAAGGTGAAGGTGCTCATTGCTGCATACACAGAAATAGCCGAGAAGTTCAAGAGCACTCAATACCAGAAGAAGGAGCTCTGGAAGGAGGTGTCGCGGAAGGTCGGGGAACCTGCCGGCAGCTGTGACAAGAAGTTCAGGAACCTCAAGCAGACGTACCTTCGATTGAGACGTAAAGCGATCTCCGGACGATGCATCACAAAATGGCGGTACTACAATGACTTTGTAAATCTATATGAAAATGAACATTCTGTACTAAATATACCTACAGATGAGATGCTTAAGCCTTCCGAAGCATGTCTCTATATCAAACAGCTGCTCAGGTTTTACATTGAAAACAAGGAGAAATTTAGTGATCCACTAGTCAAAAAGAAAAACTTGTGGAAACAGATAGCTCGAAAAATAGGTTACTCCCCCGAAGAGTGTGACAAGAAGTTTCGAAATTTAAAACATACGTACCTAAGACTGGCAGAGAAAAAATCCGCAACAGGCAAAGCCATCACTTGGCCCTACTTCTGCGACTTTGAAGAGATTTATGGGGAACCAAACTCAGCCCGAATGCAAGTCAAGCAGGAGTGTAATGTTGACAATGTAATGCTCTCAGAAATAAGGACCATAGTCCACACTGCAACCGACAGTAATGATAGAGATAAGTTTGATAAGTTAGTAAAAGCCGTTGAAGAGTCTAACAACATACAACGGGAAAGAAATAGAATATTACAGTTAATGTTGGATCGAATGCCAAATTAA
Protein Sequence
MEVNTHNESYWFVVREDQNNVVLSRFCGNNFAIQSPQRPEARYVLEPSVNQQYAPVSVPPEDVPKTYAKESTPNKEEENFWDRNKVKLFLSLCLNDSFRGETNNRPLWNEIASHIGTTPEECDKKYRNLRRTFLRLLKKKRLGKDIKWVHYHACEEVFKDCQTMSPAILVPWEDSKIRQLLTLYIENINRFRSSECLQKDVWKEIATQLHTTEYNCYHKFKNLKRTYFNYMEKGNESGKIKWPYHHFFERIFYNYHPGEKPWSKYKVKVLIAAYTEIAEKFKSTQYQKKELWKEVSRKVGEPAGSCDKKFRNLKQTYLRLRRKAISGRCITKWRYYNDFVNLYENEHSVLNIPTDEMLKPSEACLYIKQLLRFYIENKEKFSDPLVKKKNLWKQIARKIGYSPEECDKKFRNLKHTYLRLAEKKSATGKAITWPYFCDFEEIYGEPNSARMQVKQECNVDNVMLSEIRTIVHTATDSNDRDKFDKLVKAVEESNNIQRERNRILQLMLDRMPN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00933508;
90% Identity
iTF_00405716;
80% Identity
iTF_00933508;