Basic Information

Gene Symbol
-
Assembly
GCA_905404155.1
Location
FR989947.1:9282542-9284154[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.0069 18 6.2 0.0 48 86 101 139 85 140 0.73
2 4 0.00028 0.74 10.7 0.1 33 85 181 232 155 234 0.76
3 4 0.0053 14 6.5 0.1 47 83 285 320 259 322 0.79
4 4 0.00017 0.46 11.3 0.0 49 83 385 418 366 421 0.88

Sequence Information

Coding Sequence
ATGGAGGTAAATACACAGCATAACGAAAGTTATTGGTTTGTTGTGAGAGAAGATCAAAATAATGTTGTATTGAGTAGGTTCAGCGGTAACAATTTCGCCATTCAGAGTCCTCAAAGCCCCGAAGCGAGATATGTCTTAGAGCCTTCCGTGAATCAACAGTATGCCCCAGTTAGCATACCGTCTGAGGACGTTCCTAAAGCATACGCTAAAGAGAGCACACCTAATAAAGAGGAGGAGAACTTCTGGGATCGAAACAAAGTCAAACTGTTCCTCAGTTTGTGTCTTAACGACAGTTTCAGAGATGAAACAAAGAGCAGACCGCTTTGGAACGAAATCGCCCAGCACATCGGTACAACACCAGAGGAGTGCGATAAAAAATACCGTAACCTCCGACGCACATTCCTGAGATTACTAAAAAAGAAGAGATTAGGAAAAGATATAAAGTGGCTGCACTACCACGCCTGCGAGGAGGTGTTCAAAGACTGTAAAACCATGTCACCAGCTATCTTGGAGCCATGGGAGGACTCCAAGATACGACGGCTACTGACTCTGTATATCGAGAACATCAACAGGTTCAGAAACTCGGAGTGTGTGCAGAAGGACGTGTGGAAGGAAATAGCGACTCAACTCAACACTACAGAGTACAACTGTTACCATAAATTCAAAAACTTGAAAAGAACATACTTCAATTACGTAGAGAAAGGCAATGAATCTGGAAAGATAAAGTGGCCGTACCACCACTATTTCGAAAGAATATTTCACAACTACCAACCCGGCGAGAAGCCCTGGAGTAGATACAAGGTGAAGGTGCTCATTGCTGCGTACACAGAAATAGCTGAGAAGTTCAAAAGCACTAAATACCAGAAGAAGGAGCTCTGGAAGGAGGTGTCGAGGAAGGTCGGGGAGCCAGCCGGCAGCTGTGACAAGAAGTTCAGGAACCTCAAACAGACGTACCTCCGATTGAGACGTAAAGCAATCTCCGGACAATGCATCACAAAATGGCGGTACTATAATGACTTTGTAAATCTATATGAAAACGAGCATTCTGTACCAAATATACCTCCAGATTTTAAGCCTTTCGAAGCATGTCTCTATGTCAAACAGCTGCTCAGGTTTTACATTGAAAACAAGGAGAAATTTAGGGATCCACTAGTCAAAAAGAAAAACTTGTGGAAACAGATAGCTCCAAAAATAGGTTACTCCCCCGAAGAGTGTGACAAGAAGTTTCGAAATTTAAAACATACATACCTAAGACTGGCAGAGAAAAAATCTGCAACAGGCAAAGCCATCACTTGGCCCTACTTCTCTGACTTTGAAGAAATTTATGGAGATCCAAGCTCCGCCCGAATGCAAGTTAAGCAGGAGTGTAATGTTGACAATGCAATGCTCTCAGAAATAAGGACTATAGTCCACGCTGCAACTGACAGTAACGATAGAGATAAGTTTGATAAGTTAGTAAAAGCTGTTGAAGAGTCTAACAACATACAACGGGAAAGAAATAGAATATTACAGTTAATGTTGGATCAAATGCCGAATTAA
Protein Sequence
MEVNTQHNESYWFVVREDQNNVVLSRFSGNNFAIQSPQSPEARYVLEPSVNQQYAPVSIPSEDVPKAYAKESTPNKEEENFWDRNKVKLFLSLCLNDSFRDETKSRPLWNEIAQHIGTTPEECDKKYRNLRRTFLRLLKKKRLGKDIKWLHYHACEEVFKDCKTMSPAILEPWEDSKIRRLLTLYIENINRFRNSECVQKDVWKEIATQLNTTEYNCYHKFKNLKRTYFNYVEKGNESGKIKWPYHHYFERIFHNYQPGEKPWSRYKVKVLIAAYTEIAEKFKSTKYQKKELWKEVSRKVGEPAGSCDKKFRNLKQTYLRLRRKAISGQCITKWRYYNDFVNLYENEHSVPNIPPDFKPFEACLYVKQLLRFYIENKEKFRDPLVKKKNLWKQIAPKIGYSPEECDKKFRNLKHTYLRLAEKKSATGKAITWPYFSDFEEIYGDPSSARMQVKQECNVDNAMLSEIRTIVHAATDSNDRDKFDKLVKAVEESNNIQRERNRILQLMLDQMPN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00933508;
90% Identity
iTF_00405716;
80% Identity
-