Basic Information

Insect: Lydus trimaculatus
Gene Symbol: -
Assembly: GCA_037414755.1
Location: JAZBGY010002263.1:4367-6193[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0017 1.7 8.4 3.4 15 39 73 94 65 98 0.81

2 16 0.00032 0.33 10.7 2.6 6 40 93 123 88 132 0.83

3 16 0.0043 4.3 7.1 1.8 18 38 132 149 124 151 0.79

4 16 0.0005 0.51 10.1 2.1 5 40 148 179 145 182 0.90

5 16 0.019 19 5.1 1.1 2 29 173 199 172 210 0.81

6 16 0.00066 0.67 9.7 3.2 16 41 214 236 202 237 0.84

7 16 0.074 75 3.1 0.2 14 39 268 290 260 300 0.83

8 16 0.011 11 5.8 0.7 18 29 300 311 297 317 0.82

9 16 8.1e-06 0.0082 15.8 2.2 4 41 315 348 312 350 0.90

10 16 0.0071 7.3 6.4 0.9 17 40 355 375 349 378 0.76

11 16 0.01 10 5.9 0.6 12 27 400 415 390 419 0.83

12 16 3.9e-06 0.004 16.8 1.3 4 40 421 452 418 461 0.90

13 16 1.4 1.4e+03 -0.9 0.2 19 39 462 479 456 483 0.78

14 16 0.0084 8.5 6.2 2.3 3 32 503 532 501 538 0.79

15 16 0.01 10 5.9 1.3 9 27 537 554 533 566 0.79

16 16 0.028 29 4.5 1.3 13 38 568 594 561 598 0.76

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0017	1.7	8.4	3.4	15	39	73	94	65	98	0.81
2	16	0.00032	0.33	10.7	2.6	6	40	93	123	88	132	0.83
3	16	0.0043	4.3	7.1	1.8	18	38	132	149	124	151	0.79
4	16	0.0005	0.51	10.1	2.1	5	40	148	179	145	182	0.90
5	16	0.019	19	5.1	1.1	2	29	173	199	172	210	0.81
6	16	0.00066	0.67	9.7	3.2	16	41	214	236	202	237	0.84
7	16	0.074	75	3.1	0.2	14	39	268	290	260	300	0.83
8	16	0.011	11	5.8	0.7	18	29	300	311	297	317	0.82
9	16	8.1e-06	0.0082	15.8	2.2	4	41	315	348	312	350	0.90
10	16	0.0071	7.3	6.4	0.9	17	40	355	375	349	378	0.76
11	16	0.01	10	5.9	0.6	12	27	400	415	390	419	0.83
12	16	3.9e-06	0.004	16.8	1.3	4	40	421	452	418	461	0.90
13	16	1.4	1.4e+03	-0.9	0.2	19	39	462	479	456	483	0.78
14	16	0.0084	8.5	6.2	2.3	3	32	503	532	501	538	0.79
15	16	0.01	10	5.9	1.3	9	27	537	554	533	566	0.79
16	16	0.028	29	4.5	1.3	13	38	568	594	561	598	0.76

Sequence Information

Coding Sequence: ATGTGTTttttagaaaagaaagaaacaaatgaaaatagtAATTGCGATGATAAAAATAGTGATAAaactaatgataatgatgaaaatagaACTTTCCTACAACCTTGTAAAGTAGAAATTGAAGAATACCATTCTGATAAGAATCaaacaaatgatattttaaatccTATAGAAGAAAATCAGACACAATTAATCCAATCAgagaaaatcaattataacacaaatacatgtaatatttgtaataaaacattttcaacaaaatcctATTTAAAAACACACATTGAAATCCATAAAGATGAGAAACTCCATCAATGTACTGTGTGTGGTAAAACGTTTACATTAgcttcaaatttaaaaacacattTAAAAATCCATACCGGTGAAAAACCGCATCaatgtaatatttgttcaaaGAATTTCACATCAAGTACAACGTTAAAAGTACATTTTCGTATCCACACCGGTGAGAAACCATACCATTGTAATACGTGTGGTAAAGATTTTTCGGTTAGGGAGAATTTAAAGAAGCACATGCGTATCCATACTGGTGAGAAACCGTATCAATGTGATATTTGTGGTAGAAGTTTTGCTGATAGTGTCACATTAAAATCACATAAAAGAACACATACCGGTGAGAAACCGTATCATTGTACATTGTGTGGTAAGAATTTTActgtaaaaaacaatttacgaTCACATTTACGTACACATAGTTATGCAGCAAAAGCTAAAAATAACACATCCGATACGACTGTTGTACAAGATGAAGATTTAATACAACATTCAACAACACAAACTGGTGAGAAATTGTATGTTTGTAGTGTATGTAAAGAAAGTTATAAAGATGTAGATGCATTAAGACGACATTTACATTTACATAGCGGTATAAAACCACATCAATGTAATATTTGTATGAAAAGTTTCACATCAAGTGCCACATTAAAAGTACATTTTCGTATCCACACCGGTGAGAAACCGTATCATTGTAATATATGCGGTAAAGATTTTTCTATTAgagaaaatttaaagaaacataTGCGTACACATACCGGTGAGAAACCGTATCAATGTGATCTTTGTGGTAAAAGTTATACAAATAGTGGATCATTAAAATCACATGTTAGAAAACATAATATCGATCCAGATAATGATTTTGATATATTAGAAAAGAATTATACGGTTAAAGAATCACCAGatacaaatgaaaaaatattcatttgtaatatttgtaatgataattataaagatcaaatgttattaaaaGAACATATACAATCGCATAGTGATGGTAAATATGTTTGTGAAATTTGTAGtaagatttttacaaaaagtaGTAATTTATATACACATTTACGTTTACATAATGGTGATAAACCACATCCATGTAGTATATGTAATCGACGATTTCCATCGAAATCACGTTTAAATATCCATTTAAAAGTACATACCGGTGAGAAACCGTTTAGTTGTGATCTATGTGATGCACGATTTTCAGTAAAAGGTTCATTAAAAGCACATTTTCGTATCCATAATGATGAGAAACCATTCAATTGTCATATATGTAATAAAGGTTTTCGTGTGAAATGTGCTTTAACTGTACATTTACGTGCACATAATGATGAAAAACCATTCAcatgtaatatttgtaataaaagttaTAGAGTTAGAGCTATTTTAAATGAACATATGAAATCGCATACTAGTGAGAAACCGTTTGTTTgtgaaatttgcaataaagGCTTTCTACGGAAATGGTCAttgaataaacatttaaaaacacaTACGGAGAGGAATAAAGGTGATATAGAAGAGAAAGGTTTTGAATGA
Protein Sequence: MCFLEKKETNENSNCDDKNSDKTNDNDENRTFLQPCKVEIEEYHSDKNQTNDILNPIEENQTQLIQSEKINYNTNTCNICNKTFSTKSYLKTHIEIHKDEKLHQCTVCGKTFTLASNLKTHLKIHTGEKPHQCNICSKNFTSSTTLKVHFRIHTGEKPYHCNTCGKDFSVRENLKKHMRIHTGEKPYQCDICGRSFADSVTLKSHKRTHTGEKPYHCTLCGKNFTVKNNLRSHLRTHSYAAKAKNNTSDTTVVQDEDLIQHSTTQTGEKLYVCSVCKESYKDVDALRRHLHLHSGIKPHQCNICMKSFTSSATLKVHFRIHTGEKPYHCNICGKDFSIRENLKKHMRTHTGEKPYQCDLCGKSYTNSGSLKSHVRKHNIDPDNDFDILEKNYTVKESPDTNEKIFICNICNDNYKDQMLLKEHIQSHSDGKYVCEICSKIFTKSSNLYTHLRLHNGDKPHPCSICNRRFPSKSRLNIHLKVHTGEKPFSCDLCDARFSVKGSLKAHFRIHNDEKPFNCHICNKGFRVKCALTVHLRAHNDEKPFTCNICNKSYRVRAILNEHMKSHTSEKPFVCEICNKGFLRKWSLNKHLKTHTERNKGDIEEKGFE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00929747; iTF_00929984; iTF_01022391; iTF_01022667;
90% Identity: iTF_00929747; iTF_00929984;
80% Identity: iTF_00929747; iTF_00929984;