Basic Information

Insect: Lydus trimaculatus
Gene Symbol: SMARCC2
Assembly: GCA_037414755.1
Location: JAZBGY010000180.1:24169-27290[-]

Transcription Factor Domain

TF Family: MYB
Domain: Myb_DNA-binding domain
PFAM: PF00249
TF Group: Helix-turn-helix
Description: This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 9.3e-15 7e-12 44.9 0.1 3 44 593 634 591 636 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	9.3e-15	7e-12	44.9	0.1	3	44	593	634	591	636	0.95

Sequence Information

Coding Sequence: ATGATGGCTTTAGGGCCGAAAAAGGACGGCAGTCCTAATGTGAAATATTTCGAATCACCAGAAACATTAACAGCATTAGAAGTAGTAAGACAATGGTTACAAAAAAACGCAAAAAagTATATTCAAACTGAACCACCGacaaataaaagtttatcaacattaatttgtCAATTGATGCAATTCCAAGAGGATTTTCTAGggaaaaatgtacaaaaaccACCATTAACACGTATACCTGTGCGTTATTTTATGGATTTTAAGCTAGGCGGTTCATTGTGTCATATGCTGTTAGCGGCTTACAAGTTTAAAAATGAACATAATTGGCGACGTTTCGAAATACCAACAGGCAAAAATACTGGCAAATTGGATCGTGTCTTTGAAATGTTTCAAGCAATGGAAAAGGCATTAATACAAAATCGCCTGTATACAATACctgttgtttatataaaaccgGAAGTTGAAAAGACTTTAGCTAGTAAATTAAAAGATATTGTACGTAAACATTTTGCACAAGTAACAGAAAATGAAGATCAAGCAACACATATATGTTATGCACAAGTTGATCCATTAGAAGAGGAATATGGTCGTCCATTATTTAAACGTGATAAAATGGTTATGATGCATTGgtattattttccaaattcatTTGATTCATGGATTAATTTGGATGTCTCTAGTGATGGTTTGAGTAATGAAATACCATCACCACGCACAGAACCATGGCGTGTTTCATGTGCATGGTTAATGGATACAGATCATTATAATGAATGGATGGCTGAAGAAGATTATGAAGTTGATGAATTAGGACAAAAGAAAATACATCCACAACGTATGTCTGTAGAAGATGTAATGAATCCATCCAATGATGATCGATCAAAgaAGAAGGCAAAACGTAAACGTTCCCCATCACCACCATCAAAAAGTAGTAAACGTAAAAGTGGTCGTAGTCCAGCTGTTGGTAAAAAACAACGTgctgatgaaattgaaaatgaagatttaacaaaagataTGGATGAACCAACACCAGAACCGAATATAGTCGAAGTGAATTCATCATCAGttaatacaaatcaaaataataaaaaagatcaTGAATTACAACCGTTAAAAGGTGGTTCAATGACTGATTTAGAAGAACAAGAGGAACGTGGTGAAGATTCacaaaatggtaaaaataGTGATAGTAATACACAAGATGATGGTCAAGAGGATAATGTAACTGAACAAACACACCATATTATAATACCATCATATTCAGCATGGTTTGATTATAATGCAATACATGAAGTTGAAAAACGTGCATTACCAGAATTCTTCAATGGACGTAATAAATCTAAAACACCAGAAATCTATTTAGCTTATAGAAATTTCATGATTGACACATATAGATTAAATCCGACTGAATATATAACAAGTACAGCATGTCGACGGAATTTAGCTGGTGATGTTTGTGCTATAATGAGAGTACATGCATTTCTGGAACAATGgggtttaattaattatcaagtTGAAGCTGATTCAAGACCAACACCAATGGGACCACCACCTACATCCCATTTCCATATACTTTCTGATACACCATCCGGTTTACAACCAGTAAATCCACCAAAAACACCACAACCTAGTGCAGCAAAAACATTACTTGATTTAGATCGATCTCAAGatacgaaaaaaattgatataaatccGGAAATGACTAATTTCGGTTTGAAATTAGATCAATATGTTAAAAAACCAGCAGCATTACGTAATAAAAGTGCTGCTTCATTAACAAGAGATTGGACAGAACaagaaacattattattattagaaggtTTAGAAATGTATAAAGATGATTGGAATAAAGTTTGCGAACATGTTGGTTCACGTACACAAGATGAATGTATTTTACATTTCCTTCGATTACCAATTGAAGATCCATATTTAGAAGATCCAGAAGCTGGTGGTGCTTTAGGACCATTAGCATATCAACCGATTCCATTTAGTAAATCAGGCAATCCAATAATGTCAACTGTAGCATTTCTAGCATCAATTGTTGATCCTAGAGTAGCGGCTGCAGCTGCTAAATCAGCAATGAATgaatttgcaaatattaaaGATGAAGTACCTGCTGCTGTAATGGATGCTCATTTGAAGAATGTTGAAGCATCATCAGCTGAAGGTAAATACGATCCAGCTGCTAATTTAGCATTAACTGGTATCGCAGGTACAGTACCTGagaaagatgaagatgataaaattaaaaaagaaccGGAAAGTAAAGAGGATGATAAAactgaagagaaaaaaacagatGAAACAAAAGACGATAAAGATGATAAAGTTAAATcagaaacaaacaatcaatcagAAACTGTTAAAAGTGAAAAATCTGAATCGGAATATAGTAAAACAGAGAAAGGTATTAAAGATAGTGAGATGCAAAGTGCTGCAGCTGCCGCTTtagctgctgctgctgttaaAGCAAAACATTTAGCAGCTGTTGAagagagaaaaataaaatcattagtAGCATTATTAGTTGAAACACAAATGAAGAAACTCGAAATTAAATTGCGACATTTTGAGGAACTTGAAACAACAATGGAACGTGAACGTGAAGGATTAGAATATCAACGACAACAATTGATAACTGAACggcaacaatttcatttagaACAATTGAAAGCGGCTGAATTCCGTGCTAGACAACAAGCTCATCAACGATTACAACAAGCTGATCAGGGACAATGGGCGATGCAACAACAGACAGCTCATAATACAGCACCAGTTGAAGGTGCTTCCAGTACAACACCGACACCACCATCTCCACAAGCTGCTGCTGTACCATCGCCAACACCACcacatatttaa
Protein Sequence: MMALGPKKDGSPNVKYFESPETLTALEVVRQWLQKNAKKYIQTEPPTNKSLSTLICQLMQFQEDFLGKNVQKPPLTRIPVRYFMDFKLGGSLCHMLLAAYKFKNEHNWRRFEIPTGKNTGKLDRVFEMFQAMEKALIQNRLYTIPVVYIKPEVEKTLASKLKDIVRKHFAQVTENEDQATHICYAQVDPLEEEYGRPLFKRDKMVMMHWYYFPNSFDSWINLDVSSDGLSNEIPSPRTEPWRVSCAWLMDTDHYNEWMAEEDYEVDELGQKKIHPQRMSVEDVMNPSNDDRSKKKAKRKRSPSPPSKSSKRKSGRSPAVGKKQRADEIENEDLTKDMDEPTPEPNIVEVNSSSVNTNQNNKKDHELQPLKGGSMTDLEEQEERGEDSQNGKNSDSNTQDDGQEDNVTEQTHHIIIPSYSAWFDYNAIHEVEKRALPEFFNGRNKSKTPEIYLAYRNFMIDTYRLNPTEYITSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVEADSRPTPMGPPPTSHFHILSDTPSGLQPVNPPKTPQPSAAKTLLDLDRSQDTKKIDINPEMTNFGLKLDQYVKKPAALRNKSAASLTRDWTEQETLLLLEGLEMYKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEDPEAGGALGPLAYQPIPFSKSGNPIMSTVAFLASIVDPRVAAAAAKSAMNEFANIKDEVPAAVMDAHLKNVEASSAEGKYDPAANLALTGIAGTVPEKDEDDKIKKEPESKEDDKTEEKKTDETKDDKDDKVKSETNNQSETVKSEKSESEYSKTEKGIKDSEMQSAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHQRLQQADQGQWAMQQQTAHNTAPVEGASSTTPTPPSPQAAAVPSPTPPHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00167592; iTF_00078389; iTF_01366261; iTF_01566172; iTF_01022148; iTF_01311486; iTF_00852613; iTF_01409925; iTF_01567823; iTF_00639472; iTF_00841777; iTF_00987061; iTF_00414999; iTF_01283319; iTF_01329735; iTF_01480055; iTF_01480806; iTF_00752889; iTF_00814333; iTF_01277821;
90% Identity: iTF_00841777;
80% Identity: -