Tmad011584.1
Basic Information
- Insect
- Tribolium madens
- Gene Symbol
- SMARCC2_1
- Assembly
- GCA_015345945.1
- Location
- JADDYM010000019.1:10647456-10650409[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.4e-15 8.6e-12 44.9 0.1 3 44 591 632 589 634 0.95
Sequence Information
- Coding Sequence
- ATGATGGGCTACGGCCCCAAAAAGGACGGAGGTCCTAACGTGAAATATTTCGAGTCGCCGGAAACCCTCGCAGCTCTCGAGCTTGTGAGGCAGTGGCTTCAGAAAAATGGCAAAAAGTATCTTCAAGCCGAACCTGTCACTAATAAGAGTCTCTCCATGTTGGTTTTGCAATTGATGCAATTCCAGGAGGATTTTTTGGGCAAAAACGTGCAAAAACCGCCCATGATTAGAATCCCAGTGAGACATTTTCTGGATTTTAAGCCCGGGGGCTCCTTGTGCCACATGCTTTTGGCAGCGTACAAGTTTAAGAGCGAACATAATTGGCGTCGATTTGAAATACCAACAGGAAAAAGCACTGGCAAGTTGGAGCGCGTTTTCGAGATGTTGAAATGCATGGAAAAAGTTTTAGTCCAGAACAGGTTTTATACAGTTCCCTCTGTTTACATCCGGCCCGAAATCGACAAGAATCTCGCAGCGAAATTACGCGAAATTGTGTGTCGCAAAATGGCTCAAGTTGCCGAAACTGAAGAAATGGCCACTCACATTTGCTACCCCCCTGTGGACCCAGTGGAGGAAGAATACGGACGTCCTGTCTTCAAACGCGATAAGATGGTCATGATGCATTGGTACTACTTCCCGAATTCGTACGACGGCTGGATTAGTTTAGATATTTCTGGTGAAGGTTTAAGTAACGACGTCCCAAGTCCTAGAACGGAAGCATGGCGAGTATCCTGTTCTTGGTTGCTGGAAACCGATCATTATAACGAATGGATGGCAGAAGAAGACTATGAAGTAAACGAGTTGGGCCAGAAGAAGATTCACCCATTGCGAATGTCGGTCGAGGATGTTATGAACCCCTCAAATGATGACAGGTCAAAGAAGAAACAGAAGAGGAAACGATCACCTTCACCACCATCTAAAGGCGGGAAGCGTAAAAGTGGCCGAAGTCCGGCTATTGGGAAGAAACAAAGACCTGAAGACATGGAAACTGAAGACTTGACGAAAGATATGGAAGAGCCGACGCCCGAACCGAACATAGTCGAAGTTAACTCGTCAATGGCCAATCAGAACAGTAAAAAAGACCATGAATTGCAACCTTTGAAAGGCGGCTCAGTCACCGATCTTGAAGAAAATGAAGAAAGAGGTGAAGATTCGCAAACTGGCAAAAATAGCGATAGCAATACTCAAGATGATGGACAAGAAGATAACGTTACAGAACAAACCCATCATATTATAATACCGTCATATTCGGCTTGGTTTGACTATAATGCGATTCACGAAGTCGAGAAAAGAGCCCTCGCGGAGTTTTTCAATGGTCGAAATAAGTCGAAAACGCCGGAAATTTATCTCGCTTACCGGAATTTCATGATTGATACGTACAGATTAAACCCGACTGAATACATAACTAGTACAGCTTGTCGTCGAAATCTGGCAGGTGATGTTTGTGCCATTATGCGAGTCCACGCTTTCCTTGAACAATGGGGTTTGATTAATTATCAAGTCGACACTGATTCAAGACCCACACCCATGGGTCCACCACCAACTTCCCATTTCCATATTTTGTCAGACACTCCGTCGGGCCTTCAACCTGTGAATCCCCCAAAAACACAACAACCGAGTGCGGCAAAAACCCTACTGGACTTAGATCGGTCACAAGATATCAAAAAAGGAGACGGTAGCGAACAAATGAATAATTTCGGTTTAAAACTGGATCAATATGCGAAAAAACCGGCAGCATTGAGAAACAAAAGTGCAGCATCTTTGACTCGAGACTGGACCGAACAAGAAACACTTCTTTTATTAGAAGGCTTAGAGATGTATAAAGATGATTGGAATAAAGTTTGCGAGCACGTCGGCTCGAGGACTCAAGACGAGTGCATATTGCACTTTTTGCGTTTGCCTATAGAAGACCCATATTTGGAAGATCCGGACGCTGGGGGCGCTTTGGGGCCTTTGGCTTATCAGCCAATACCATTCAGCAAAGCTGGAAATCCTATTATGTCAACTGTTGCATTTCTAGCCTCGATTGTTGACCCTCGAGTCGCTGCGGCTGCAGCGAAATCAGCAATGATCGAATTTGCCAATATTAAAGATGAAGTCCCTGCGGCCGTAATGGACGCTCATTTGAAAAATGTCGAGGCGAGTTCAACCGAAGGCAAATATGATCCTGCTGCGAATCTAGCTTTGACTGGAATCGCAGGAACCGCACCCGAGAAAGAAGAAGAAGAAAAAATAAAGAAAGAACCAGAGAATAAAGAAGAAGAGAAAACCCAAGAAGAAAAGAAACCTGAACCTGAAAAAGAAGAGAAAGAAGATAAACCTGTTAAAAGTGAAACACCGAGCGAACCTGTCAAAACAGAAAAGCCTGAAGAACCGGAAAGAAAACCTGAAAGGACTGTTAAAGACAGCGAAATGCAGAGTGCGGCGGCAGCGGCATTGGCCGCTGCCGCAGTTAAAGCTAAACATTTGGCGGCCGTAGAAGAACGCAAGATTAAGTCTCTAGTTGCGTTGTTGGTTGAAACGCAAATGAAGAAATTAGAAATAAAATTGAGACACTTTGAGGAGTTGGAAACGACAATGGAACGCGAAAGAGAGGGTTTGGAGTATCAGAGACAGCAATTGATTACGGAAAGACAACAATTTCATTTAGAACAATTGAAAGCTGCAGAGTTTAGGGCGCGACAGCAGGCTCATCAGAGATTGCAGGCGGATCAAGGTCAGTGGGCGATGCAACAACCACAAATGACGCATTCGGCACCGCCCAGTGAAGGAGCACCGACTAATACGCCTACACCCCCAAGTCCACAAGCAGCAGCGGTGGCATCACCAGCAGCGCCGCATCATTTAGGATAG
- Protein Sequence
- MMGYGPKKDGGPNVKYFESPETLAALELVRQWLQKNGKKYLQAEPVTNKSLSMLVLQLMQFQEDFLGKNVQKPPMIRIPVRHFLDFKPGGSLCHMLLAAYKFKSEHNWRRFEIPTGKSTGKLERVFEMLKCMEKVLVQNRFYTVPSVYIRPEIDKNLAAKLREIVCRKMAQVAETEEMATHICYPPVDPVEEEYGRPVFKRDKMVMMHWYYFPNSYDGWISLDISGEGLSNDVPSPRTEAWRVSCSWLLETDHYNEWMAEEDYEVNELGQKKIHPLRMSVEDVMNPSNDDRSKKKQKRKRSPSPPSKGGKRKSGRSPAIGKKQRPEDMETEDLTKDMEEPTPEPNIVEVNSSMANQNSKKDHELQPLKGGSVTDLEENEERGEDSQTGKNSDSNTQDDGQEDNVTEQTHHIIIPSYSAWFDYNAIHEVEKRALAEFFNGRNKSKTPEIYLAYRNFMIDTYRLNPTEYITSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDTDSRPTPMGPPPTSHFHILSDTPSGLQPVNPPKTQQPSAAKTLLDLDRSQDIKKGDGSEQMNNFGLKLDQYAKKPAALRNKSAASLTRDWTEQETLLLLEGLEMYKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEDPDAGGALGPLAYQPIPFSKAGNPIMSTVAFLASIVDPRVAAAAAKSAMIEFANIKDEVPAAVMDAHLKNVEASSTEGKYDPAANLALTGIAGTAPEKEEEEKIKKEPENKEEEKTQEEKKPEPEKEEKEDKPVKSETPSEPVKTEKPEEPERKPERTVKDSEMQSAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHQRLQADQGQWAMQQPQMTHSAPPSEGAPTNTPTPPSPQAAAVASPAAPHHLG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00929504;
- 90% Identity
- iTF_00639472;
- 80% Identity
- -