Mvar004808.1
Basic Information
- Insect
- Mylabris variabilis
- Gene Symbol
- SMARCC2
- Assembly
- GCA_037464815.1
- Location
- JAZBGW010001659.1:1946-7878[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.8e-15 8.5e-12 45.0 0.1 3 44 577 618 575 620 0.95
Sequence Information
- Coding Sequence
- atgatgTCTTTAGGGCCGAAAAAGGACGGCAGTCCTaatgtgaaatattttgaagCACCGGAAACTTTAGCAGCATTAGAAGTTGTCCGACAATGGTTAcagaaaaatgcaaaaaaaTATATTCAAACAGAACCACCGACAAATAAGAGTTTGGCAACGTTAGTTTGTCAATTGATGCAATTCCAAGAGGATTTCCTAGGGAAGAATGTACAAAAACCGCCACTTACACGAATTCCGGTGCGCTATTTTATGGATTTTAAACCGGGTGGTGCATTGTGCCATATGTTATTAGCTgcttacaaatttaaaaatgaacatAATTGGCGACGTTTTGAACTACCAACAGGCAAAaatACTGGCAAATTGGATCGTTTCTTTGAGATGTTTCAAGCAATGGAGAGAGCATTAATACAGAATCGTTTATATACAATACctgttgtttatattaaacCGGAAATTGATAAGACTTTAGCAAGTAAATTAAAAGATATTGTACGTAAACGTTCTGCACAAATATGTGATAATGAAGATCAAGCGACACATATATGTTATCCACAAATTGATCCATTAGAAGAAGAATATGGACGTCCATTATTTAAACGTGATAAAATGGTTATGATGCATTGTGAAGGTTTAAGTAATGAAATACCATCACCACGCACAGAACCATGGCGTGTCTCCTGTGCATGGTTGATGGATACAGATCATTACAATGAATGGATGGCTGAAGAAGATTATGAAGTTGATGAATTAGGACAGAAGAAAGTCCATCCACAACGTATGTCTGTCGAAGATGTTATGAATCCATCAAATGATGATCGATCAAAGAAGAAGGCGAAACGTAAACGTTCCCCATCACCACCATCGAAAAGTAGTAAACGTAAAAGTGGCCGTAGTCCAGCTGTTGGGAAAAAACAACGTgctgatgaaattgaaaatgaagatTTAACAAAAGATATGGAAGAACCAACACCAGAACCAAATATTGTTGAAgtgaataattcaacaaatttgaatccaaataataagaaagaTCATGAATTACAACCGTTAAAAGGTGGTTCAATGACCGATTTAGAAGAACAAGAGGAACGTGGTGAAGATTCACAAAATGGTAAAAATAGTGATAGTAATAATACACAGGATGATGGTCAAGAGGATAATGTAACAGAACAAACACATCATATTATAATACCATCATATGCTGCATGGTTTGATTATAATGCAATACATGAAGTTGAGAAACGTGCATTACCCGAATTCTTTAACGGtcgtaataaatcaaaaacacCAGAAATCTATTTAGCTTATCGAAATTTCATGATTGATACATATCGATTAAATCCAACTGAATATATAACAAGTACAGCATGTCGACGGAATTTAGCTGGTGATGTTTGTGCTATAATGAGAGTGCATGCATTCTTAGAACAATGgggtttaattaattatcaagtAGATGCCGATTCTAGACCAACACCAATGGGCCCACCACCTACATCACATTTCCATATATTATCTGATACACCATCCGGTTTACAACCGGTGAATCCACCAAAAACACCACAACCAAGTGCTGCCAAAACTCTACTCGATTTAGATCGTTCACAAGATAATATCAAGAAAAATGATATAAATCCAGAAATGGTTAATTTCGGTTTGAAATTAGATCAGTATGTTAAGAAACCAGCAGCTTTACGTAATAAAAGTGCTGCATCATTGACACGTGATTGGACTGAACAagaaactttattattattagaaggTTTAGAAATGTATAAAGATGATTGGAATAAAGTTTGTGAACATGTTGGATCTCGTACACAAGATGAAtgtattttacattttctacGTTTACCAATAGAAGATCCATATTTAGAAGATCCAGAAGCTGGTGGTGCTCTAGGACCATTAGCGTACCAACCGATACCATTTAGTAAAGCTGGCAATCCAATAATGTCAACTGTGGCATTTTTAGCATCAATTGTTGATCCACGTGTGGCTGCAGCAGCTGCTAAATCAGCAATGAATGAATTTGCGAATATTAAAGATGAAGTACCAGCTGCTGTAATGGATGCACATTTAAAGAATGTTGAAGCATCATCAGCTGAAGGTAAATACGATCCAGCTGCTAATTTAGCATTAACAGGAATCGCCGGTACTGTACCCGAAAAAGATGAGGaagacaaaattaaaaaagaaccagaaaataaagatgatgataataaaactgaAGAGAAGAAAGCTTCACCTGATGAAACCAAGGATGATAaagatgataaaattaaatctgAACCGAATAATCAATcagaaattgttaaaagtgAAAAATCTGAAACGGAATTTACTAATAAATCAGAGAAAAGTATTAAAGATAGTGAGATGCAGAGTGCTGCAGCCGCAGCTCTAGCTGCTGCAGCTGTTAAAGCCAAACATTTAGCAGCTGTTGAAGAACGTAAAATCAAATCATTAGTTGCACTATTGGTGGAGACACAAATGAAGAaacttgaaattaaattacgaCATTTTGAAGAACTTGAAACCACAATGGAACGTGAACGTGAAGGATTAGAATATCAACGACAACAATTAATAACTGAACGACAACAATTCCATTTAGAACAATTGAAAGCGGCTGAATTCCGGGCACGCCAGCAGGCACATCAACGATTACAAGCCGATCAAGGACAATGGGCGATGCAACAACAGACAGCTCATAATACACCACCAACAGTTGAAGGTGCATCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTCTAA
- Protein Sequence
- MMSLGPKKDGSPNVKYFEAPETLAALEVVRQWLQKNAKKYIQTEPPTNKSLATLVCQLMQFQEDFLGKNVQKPPLTRIPVRYFMDFKPGGALCHMLLAAYKFKNEHNWRRFELPTGKNTGKLDRFFEMFQAMERALIQNRLYTIPVVYIKPEIDKTLASKLKDIVRKRSAQICDNEDQATHICYPQIDPLEEEYGRPLFKRDKMVMMHCEGLSNEIPSPRTEPWRVSCAWLMDTDHYNEWMAEEDYEVDELGQKKVHPQRMSVEDVMNPSNDDRSKKKAKRKRSPSPPSKSSKRKSGRSPAVGKKQRADEIENEDLTKDMEEPTPEPNIVEVNNSTNLNPNNKKDHELQPLKGGSMTDLEEQEERGEDSQNGKNSDSNNTQDDGQEDNVTEQTHHIIIPSYAAWFDYNAIHEVEKRALPEFFNGRNKSKTPEIYLAYRNFMIDTYRLNPTEYITSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDADSRPTPMGPPPTSHFHILSDTPSGLQPVNPPKTPQPSAAKTLLDLDRSQDNIKKNDINPEMVNFGLKLDQYVKKPAALRNKSAASLTRDWTEQETLLLLEGLEMYKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEDPEAGGALGPLAYQPIPFSKAGNPIMSTVAFLASIVDPRVAAAAAKSAMNEFANIKDEVPAAVMDAHLKNVEASSAEGKYDPAANLALTGIAGTVPEKDEEDKIKKEPENKDDDNKTEEKKASPDETKDDKDDKIKSEPNNQSEIVKSEKSETEFTNKSEKSIKDSEMQSAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHQRLQADQGQWAMQQQTAHNTPPTVEGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00929504;
- 90% Identity
- iTF_00841777;
- 80% Identity
- -