Lpor017061.2
Basic Information
- Insect
- Lycophotia porphyrea
- Gene Symbol
- retn
- Assembly
- GCA_950005105.1
- Location
- OX465399.1:11819681-11824800[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.3e-20 1.3e-16 61.5 0.0 11 89 7 83 3 83 0.92 2 2 3.3 9.9e+03 -2.3 0.0 25 38 210 223 172 226 0.55
Sequence Information
- Coding Sequence
- ATGAAGTACGCAGTAAAGGGTTTTACAACTTGCAATAGCACTCCAATCAACCGGCTTCCAATAATGGCGAAGTCGGTGCTAGACCTGTACGAGCTGTACAACCTGGTGATAGCCCGCGGTGGGCTGGTGGAGGTCATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGGCTGCGGTTGCCATCTTCCATCACGTCTGCTGCCTTCACGTTGCGCACACAATACATGAAATATCTGTATGACTACGAGTGTGAGAAGAAGAACCTATCAACCAGGAGTGAGCTAGACGCAGCTATTGAAGGCAACAAGCGTGAGGGTCGCCGCGCTTCGGGGCAATACGACGCACAAGCTGCTTTAGCTATGCCCCAACTAAACCGCGTGCCCGCGTCTCTCGCGCAGCTGTCGCAGCACATGCAGCCGCTGTCACTGTCGCTGGGGGGTGTGGCTCCGCGCCTGCCACCACTGCCGCCGCACGCGCCTCACCTGGCGCAGCACGACATCGAGTACAGGGTGCGCGAGTACATGAAGATGATACAGCAGCAGAGGGAACTTATGAGAAatgGTTCCGAATCACCCCCCAGCAACGGACAAGCGCCAATAATGTCACCCCGCGACGCCGCCCTTAGTGCCATCGACGTCTCCCGCCTCACCCTCTGGTCGCtctacaacaataacaacaataacagcCCACAACCGGACCTTGAGCCACAACGCGAGGCTCTGAACCTGAGCGAGAGCCCCAACTCGCTCACGAGCGGCGGCAAGCGCGAGGCGTGCCGCTCCCCCGCGCCACCCGCCAAGCGCCGCACGCCGCGCCCCGCGTCCCGCCCCGCCTCGCCCCGCGACCACCTGCACTCGCCGCCGCAGCACCGCCACAGCCGCAGGGACGCCACGTCACCGCCACAGATCAACGGCATGCCCAATACTAATGGTGTCAATGGAGCTGCCTTCAAGATTACCACCAGAGGAGACGCAAGCACAGGAGACCAGCAACTTGTAGTGTCAATAGAGCTGAACGGAGTAACGTATGAAGGTGTACTCTTCCCCTCAGGCAACGGTCAGAACGGACACAGACAAATGGTGTCTTAA
- Protein Sequence
- MKYAVKGFTTCNSTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPQLNRVPASLAQLSQHMQPLSLSLGGVAPRLPPLPPHAPHLAQHDIEYRVREYMKMIQQQRELMRNGSESPPSNGQAPIMSPRDAALSAIDVSRLTLWSLYNNNNNNSPQPDLEPQREALNLSESPNSLTSGGKREACRSPAPPAKRRTPRPASRPASPRDHLHSPPQHRHSRRDATSPPQINGMPNTNGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01029938;
- 90% Identity
- iTF_01025756;
- 80% Identity
- -