Lser005156.1
Basic Information
- Insect
- Lucilia sericata
- Gene Symbol
- Rel
- Assembly
- GCA_015586225.1
- Location
- NW:267519-272196[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4.9e-52 1.4e-48 164.7 1.1 1 168 164 342 164 343 0.92 2 3 2.2 6.2e+03 -3.3 0.1 112 147 565 603 551 614 0.45 3 3 1.6 4.7e+03 -2.9 0.0 58 80 859 880 848 902 0.64
Sequence Information
- Coding Sequence
- atgGAAAATATGATGCCATATGTAAATGTTACAAATGAAAAGGATTTTCTCAATATGGATACACTGGAACGTATACGAAGTGTCAGCGAATCTTCAATGGGTGGCACCAGTGGCTATAATAGCACAACATCTCCAGGACCTGAAAATTCTCCAAACTCAAGTCGTTATTCACCGGTACAATCACCAGATTCCGTACTACAAACTGAATTTTCCCAATTAGTGATACCACCAATATCTTAtcaacaaacacaacaaaattCTTCACAATATGTACAGTTGCAAAATGTACACATgaatgtaaacaacaacaacaacaaccagcaAGCAATTTTATATCAACAACAGCATAgtcaaaatatgaatttttcgCCTCATTTAAACTTTGGAAATCCTATAAATtttcaacagcagcagcaacaatttCAACAGCCAATGGCCACAGCGACATCAATGTCTTATACGGATGTTAAATATGAATACGAAGCAACTTTACGCATTACTGAACAACCGGTGGAGAAGTTCCGTTTTCGTTACAAGTCGGAAATGCATGGTACACATGGCTCTCTAAATGGTACCAATTcacaaagaaatacaaaaactttTCCCGAAGTCGAACTATGCGGCTATAAGGGACCGGCCATCATACGCTGTAGTTTGTTCCAGACTACTCTAGAGAGTCCACATTCACATCAGTTGGTGGTGCGTAAGGATGACCACGATATCTGTGATCCACACGAACTAAAAGTTTCCCAAGAAGTGGGTTATTTTGCTGAATTCAAAAATATGGGCATTATACATACAGCCAAGAAATTCATTGTCGAGGAATTGTTAAAAAAGAAACGTAAACGTTTGGGTCGCGAAGTTTTGACAACAAAGGAAGAACAAGAGTTGTATAAGCAAACAGAAAAAGAAGCCAAGGATATGAATTTGAATCAGGTACGTCTATGTTTCGAAGCATTTCGTATTGAAGACAACAAATCATACACACCCATTGCCGCGCCCGTCTATTCAAATCCCATTAACAATCGTAAATCAGCGCAAACGGGAGAATTGCGTATTACACGCTTGAGTATTGCAACCGGTAATGTTGCAGGTGGCGATGATTTGATATTACTAGTGGAAAAAGTAAgcaaaaagaatataaaagtaCGATTCTATGAAATGGTCGAAGATGAACAAGTATGGGAGGCGTTTGCTACTTTTCGCGAATCCGATGTTCATCATCAATATGCAATCGTGTGCCGAACACCAGCCTATAAAGATAAGGATATCGATAAAGCAGTTGAGGTATTTATTGAGTTAGTAAGACCTTCAGATGATGAACGCAGTTATCCGCCGGTATCATTTCGTTATAAGCCCAGTGCTGCAGTAATATCACGTAAACGTAGACGTACATGTTCATCTTTTAATAGCGGCTCCTGCAGTAATTCGGGTTCGTTAAGCTCAGGCGAGATACCTAAAACTATACAAGAacaacagaaaatttttaataaatcagaTGAACTTAAGGAATTATTTAACTCAGGATATATTAAATCCGATGTATCATTAGATTCAGGCTTATTGGCATATTTAGATGATCCAAGTTTGAAGGATTTGGACACAGTACTAAATAATATGGAAACTGGCGCAGGGCGTATCGAAAGAGATGGTATATGTACTACAAATGAAACTAAAAACCACTATCACTATAAAAAATCTATGATTAGCAAAAAACAAATGGATTTAGCCAGACAGCAAAGTGCTCAACACCAGCAGCCACTTAATGTATACTTGCAACGTATTTTAACTATATTTCAGGATACCATTAGATCTTCGACGCCCCTCAATACTACTAAACGCGATAGTGCCGCTGAACAAATAACCAAAATCATTAATGAACATTCAGAAAAATATGGCGAATCCCTGATACACGAAATCGTACTGGCAGACAACAATAAATATGCCATAccaatatttaaagttttagattatttcaatttaaatgaacTTTTAAATACCCTCCTGAATAAACGAACACAATCGGCATTACACTATGCCTGCCTCTATGGTCAGCCCACATATATAAGACCACTTTTGAAATTGGGCTGTAATCCCAATATACAAGATTCCGAGGGTAATACTGCTCTTCATATAGCAGTACATGAGAAACACTTGAAATGTTtggaaagttttataaattcgGAAATGCCTTTAAATCTGAATCATTTAAACGATGATGGTTTTACACCCTTGCACTTGGCCATACGTGATAATAATTACGATATTGTGGCCAAACTATTAAAGTTTGATACCAGCACTGTAGCAACGCCTTGCAGTAAAGATGGCAGCAATGCCTTACACATGGCTGTACAACAACAGAATCTAAAATTGGTTAATTTAATCGTGGACAATAGCCCTTTAATAGCTACACTATTATATGCCAACAATAGGGCCGGTTATACGCCTTTGGATTTGGCCAAACAACTGGTAACGGGTGATGAACAGGGAAAACAGATATTAAGTCTACTGTTAACTTTCTACAATAAATATCCTTCCCAGGATAAAGCAGAAAAGATGGATGTTAACACCTTTAATGAAGATGATGACGAGGATGAGGAGCATAAACTGGTAATAAAAGAAGAAGAGAATTCATGTTCATCTACCGAAGATGACGAAGAGGATAACAGCAGTAATTTAAGTGCGGGGGAAGCTAAAACCAAAACCCAGCCgccaatacaaaacaaaataataaaaccaaTCGAAATTAAACAAGAGATAATCGATGATAATGTTACAATTACAACTACCCCTACAACACTCAGTGTAATGGATCTGGAGTTggctttaaataataaagaaattttctctaaacTCGCCGCTAAACTAAATGAGAATGAAAATTGGAAGAAAATAGGCACAACAATGGAAATGCCAATTTTTTACTTAACGAATGCTCCAGCGTTTCTTAACTACTTAAAACGTAATATAAAAACAGTAAATTGTACACAATTCATCGAAGAATTGGAAAAAAGTGacaaaagtttaattaatttattattaaataattaa
- Protein Sequence
- MENMMPYVNVTNEKDFLNMDTLERIRSVSESSMGGTSGYNSTTSPGPENSPNSSRYSPVQSPDSVLQTEFSQLVIPPISYQQTQQNSSQYVQLQNVHMNVNNNNNNQQAILYQQQHSQNMNFSPHLNFGNPINFQQQQQQFQQPMATATSMSYTDVKYEYEATLRITEQPVEKFRFRYKSEMHGTHGSLNGTNSQRNTKTFPEVELCGYKGPAIIRCSLFQTTLESPHSHQLVVRKDDHDICDPHELKVSQEVGYFAEFKNMGIIHTAKKFIVEELLKKKRKRLGREVLTTKEEQELYKQTEKEAKDMNLNQVRLCFEAFRIEDNKSYTPIAAPVYSNPINNRKSAQTGELRITRLSIATGNVAGGDDLILLVEKVSKKNIKVRFYEMVEDEQVWEAFATFRESDVHHQYAIVCRTPAYKDKDIDKAVEVFIELVRPSDDERSYPPVSFRYKPSAAVISRKRRRTCSSFNSGSCSNSGSLSSGEIPKTIQEQQKIFNKSDELKELFNSGYIKSDVSLDSGLLAYLDDPSLKDLDTVLNNMETGAGRIERDGICTTNETKNHYHYKKSMISKKQMDLARQQSAQHQQPLNVYLQRILTIFQDTIRSSTPLNTTKRDSAAEQITKIINEHSEKYGESLIHEIVLADNNKYAIPIFKVLDYFNLNELLNTLLNKRTQSALHYACLYGQPTYIRPLLKLGCNPNIQDSEGNTALHIAVHEKHLKCLESFINSEMPLNLNHLNDDGFTPLHLAIRDNNYDIVAKLLKFDTSTVATPCSKDGSNALHMAVQQQNLKLVNLIVDNSPLIATLLYANNRAGYTPLDLAKQLVTGDEQGKQILSLLLTFYNKYPSQDKAEKMDVNTFNEDDDEDEEHKLVIKEEENSCSSTEDDEEDNSSNLSAGEAKTKTQPPIQNKIIKPIEIKQEIIDDNVTITTTPTTLSVMDLELALNNKEIFSKLAAKLNENENWKKIGTTMEMPIFYLTNAPAFLNYLKRNIKTVNCTQFIEELEKSDKSLINLLLNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00921218;
- 90% Identity
- iTF_00921218;
- 80% Identity
- -